Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0982
         (353 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8A6Z1 Cluster: Sensor protein; n=11; Bacteroides|Rep: ...    33   1.9  
UniRef50_O25254 Cluster: ATP-dependent hsl protease ATP-binding ...    32   3.2  
UniRef50_Q3A1Z1 Cluster: Outer membrane protein/peptidoglycan-as...    31   5.7  
UniRef50_Q8GU62 Cluster: MRP-like ABC transporter; n=8; Magnolio...    31   7.5  
UniRef50_Q7XN13 Cluster: OSJNBb0016D16.20 protein; n=3; Oryza sa...    31   7.5  
UniRef50_A7QND5 Cluster: Chromosome chr2 scaffold_132, whole gen...    31   7.5  
UniRef50_Q9LYS2 Cluster: Multidrug resistance-associated protein...    31   7.5  
UniRef50_A5UZ67 Cluster: ATPase (AAA+ superfamily)-like protein;...    30   9.9  

>UniRef50_Q8A6Z1 Cluster: Sensor protein; n=11; Bacteroides|Rep:
           Sensor protein - Bacteroides thetaiotaomicron
          Length = 1346

 Score = 32.7 bits (71), Expect = 1.9
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +1

Query: 46  VLRDNVELFIFESDSDLFEPLTNSISIG*SETGAWRS 156
           ++ D V   I +S+ DL+    N IS+  S+TG WRS
Sbjct: 346 LINDQVNSIIEDSEGDLWYGTNNGISLQDSKTGKWRS 382


>UniRef50_O25254 Cluster: ATP-dependent hsl protease ATP-binding
           subunit hslU; n=11; Epsilonproteobacteria|Rep:
           ATP-dependent hsl protease ATP-binding subunit hslU -
           Helicobacter pylori (Campylobacter pylori)
          Length = 443

 Score = 31.9 bits (69), Expect = 3.2
 Identities = 16/39 (41%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +1

Query: 10  NSVVLVQNYHRIVLRDNVELFIFES-DSDLFEPLTNSIS 123
           NSV+LV+N H+  L+D +E  + E     L  PL N +S
Sbjct: 108 NSVLLVENEHKEKLKDKIEEAVIEKIAKKLLPPLPNGVS 146


>UniRef50_Q3A1Z1 Cluster: Outer membrane
           protein/peptidoglycan-associated (Lipo)proteins; n=1;
           Pelobacter carbinolicus DSM 2380|Rep: Outer membrane
           protein/peptidoglycan-associated (Lipo)proteins -
           Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1)
          Length = 427

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +1

Query: 70  FIFESDSDLFEPLTNSISIG*SETGAWRSE 159
           ++FE D DL + LT S+ +G + T +W +E
Sbjct: 44  YVFEGDQDLEDDLTYSLGLGYNLTDSWSTE 73


>UniRef50_Q8GU62 Cluster: MRP-like ABC transporter; n=8;
            Magnoliophyta|Rep: MRP-like ABC transporter - Oryza
            sativa subsp. japonica (Rice)
          Length = 1574

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 14/29 (48%), Positives = 22/29 (75%)
 Frame = -3

Query: 291  VVTVAHRLPTVIEALIIIAFVEIRELE*D 205
            V+T+AHR+ TVI++ +I+ F E R +E D
Sbjct: 1519 VLTIAHRIHTVIDSDLILVFSEGRIIEYD 1547


>UniRef50_Q7XN13 Cluster: OSJNBb0016D16.20 protein; n=3; Oryza
            sativa|Rep: OSJNBb0016D16.20 protein - Oryza sativa
            (Rice)
          Length = 1187

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 14/29 (48%), Positives = 22/29 (75%)
 Frame = -3

Query: 291  VVTVAHRLPTVIEALIIIAFVEIRELE*D 205
            V+T+AHR+ TVI++ +I+ F E R +E D
Sbjct: 1132 VLTIAHRIHTVIDSDLILVFSEGRIIEYD 1160


>UniRef50_A7QND5 Cluster: Chromosome chr2 scaffold_132, whole genome
           shotgun sequence; n=3; Vitis vinifera|Rep: Chromosome
           chr2 scaffold_132, whole genome shotgun sequence - Vitis
           vinifera (Grape)
          Length = 266

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 12/29 (41%), Positives = 22/29 (75%)
 Frame = -3

Query: 291 VVTVAHRLPTVIEALIIIAFVEIRELE*D 205
           V+TVAHR+PTV++  +++A  + + +E D
Sbjct: 204 VITVAHRIPTVMDCTMVLAISDGKLVEYD 232


>UniRef50_Q9LYS2 Cluster: Multidrug resistance-associated protein 14;
            n=18; Magnoliophyta|Rep: Multidrug resistance-associated
            protein 14 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 1389

 Score = 30.7 bits (66), Expect = 7.5
 Identities = 12/29 (41%), Positives = 22/29 (75%)
 Frame = -3

Query: 291  VVTVAHRLPTVIEALIIIAFVEIRELE*D 205
            V+TVAHR+PTV++  ++++  + R +E D
Sbjct: 1331 VITVAHRIPTVMDCTMVLSISDGRIVEYD 1359


>UniRef50_A5UZ67 Cluster: ATPase (AAA+ superfamily)-like protein;
           n=9; cellular organisms|Rep: ATPase (AAA+
           superfamily)-like protein - Roseiflexus sp. RS-1
          Length = 1122

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 13/23 (56%), Positives = 16/23 (69%)
 Frame = -3

Query: 231 VEIRELE*DFASYVLLPMLDRPG 163
           VE+R+L  DFA Y+ LP L  PG
Sbjct: 908 VEVRQLVEDFAKYLYLPRLAEPG 930


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 310,537,684
Number of Sequences: 1657284
Number of extensions: 5062569
Number of successful extensions: 11441
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11440
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11514999177
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)