Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0982
         (353 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF560741-1|ABQ59051.1|  702|Homo sapiens DNAJC14 protein protein.      29   4.1  
BC117148-1|AAI17149.1|  702|Homo sapiens DnaJ (Hsp40) homolog, s...    29   4.1  
BC117146-1|AAI17147.1|  702|Homo sapiens DnaJ (Hsp40) homolog, s...    29   4.1  
AY188447-1|AAO73451.1|  702|Homo sapiens DnaJ protein protein.         29   4.1  
AK057354-1|BAB71445.1|  274|Homo sapiens protein ( Homo sapiens ...    29   4.1  
BC022451-1|AAH22451.1|  473|Homo sapiens SETD6 protein protein.        28   7.2  
AK127136-1|BAC86845.1|  139|Homo sapiens protein ( Homo sapiens ...    28   7.2  

>EF560741-1|ABQ59051.1|  702|Homo sapiens DNAJC14 protein protein.
          Length = 702

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +2

Query: 110 RTQSQSDSRKLGRGDPNQPGRSNIGSRT*EA 202
           R  ++ D+R+ GR DP  PGR  +G +  +A
Sbjct: 200 RFPTKEDTREGGRRDPRSPGRHRLGRKRSQA 230


>BC117148-1|AAI17149.1|  702|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily C, member 14 protein.
          Length = 702

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +2

Query: 110 RTQSQSDSRKLGRGDPNQPGRSNIGSRT*EA 202
           R  ++ D+R+ GR DP  PGR  +G +  +A
Sbjct: 200 RFPTKEDTREGGRRDPRSPGRHRLGRKRSQA 230


>BC117146-1|AAI17147.1|  702|Homo sapiens DnaJ (Hsp40) homolog,
           subfamily C, member 14 protein.
          Length = 702

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +2

Query: 110 RTQSQSDSRKLGRGDPNQPGRSNIGSRT*EA 202
           R  ++ D+R+ GR DP  PGR  +G +  +A
Sbjct: 200 RFPTKEDTREGGRRDPRSPGRHRLGRKRSQA 230


>AY188447-1|AAO73451.1|  702|Homo sapiens DnaJ protein protein.
          Length = 702

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +2

Query: 110 RTQSQSDSRKLGRGDPNQPGRSNIGSRT*EA 202
           R  ++ D+R+ GR DP  PGR  +G +  +A
Sbjct: 200 RFPTKEDTREGGRRDPRSPGRHRLGRKRSQA 230


>AK057354-1|BAB71445.1|  274|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32792 fis, clone TESTI2002369. ).
          Length = 274

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/31 (38%), Positives = 19/31 (61%)
 Frame = +2

Query: 110 RTQSQSDSRKLGRGDPNQPGRSNIGSRT*EA 202
           R  ++ D+R+ GR DP  PGR  +G +  +A
Sbjct: 200 RFPTKEDTREGGRRDPRSPGRHRLGRKRSQA 230


>BC022451-1|AAH22451.1|  473|Homo sapiens SETD6 protein protein.
          Length = 473

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -1

Query: 203 LPPMSCFLCWTDQVGSDLHAPVSD 132
           L P++CFL W  +VG +L   VS+
Sbjct: 19  LDPVACFLSWCRRVGLELSPKVSE 42


>AK127136-1|BAC86845.1|  139|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45193 fis, clone BRAWH3049726. ).
          Length = 139

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -1

Query: 203 LPPMSCFLCWTDQVGSDLHAPVSD 132
           L P++CFL W  +VG +L   VS+
Sbjct: 19  LDPVACFLSWCRRVGLELSPKVSE 42


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,321,256
Number of Sequences: 237096
Number of extensions: 831162
Number of successful extensions: 1514
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1478
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1514
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2075554296
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)