Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0981
(700 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 28 0.084
L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 27 0.11
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 27 0.11
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 27 0.15
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 27 0.15
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 27 0.15
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 25 0.59
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 24 1.0
U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 23 3.2
U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 23 3.2
AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 23 3.2
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 27.9 bits (59), Expect = 0.084
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +1
Query: 163 NWKSNEARRPKTYNCTACNKWFTSSGHLKRHYNTTLHKNAVR 288
+++++ RP + C C + FT+ G+LK H K +R
Sbjct: 153 HYRTHTGERP--FKCKICGRAFTTKGNLKTHMGVHRAKPPMR 192
Score = 21.0 bits (42), Expect = 9.7
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = +1
Query: 199 YNCTACNKWFTSSGHLKRH 255
+ C C+K FT++ L++H
Sbjct: 195 HQCPVCHKKFTNALVLQQH 213
>L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein
protein.
Length = 74
Score = 27.5 bits (58), Expect = 0.11
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 193 KTYNCTACNKWFTSSGHLKRH 255
K + C C+K FT HLK H
Sbjct: 8 KPFECQECHKRFTRDHHLKTH 28
Score = 23.4 bits (48), Expect = 1.8
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = +1
Query: 193 KTYNCTACNKWFTSSGHLKRH 255
+ Y C C++ F +L+RH
Sbjct: 36 RPYRCEHCDRQFVQVANLRRH 56
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 27.5 bits (58), Expect = 0.11
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 193 KTYNCTACNKWFTSSGHLKRH 255
K + C C+K FT HLK H
Sbjct: 161 KPFECQECHKRFTRDHHLKTH 181
Score = 23.4 bits (48), Expect = 1.8
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = +1
Query: 193 KTYNCTACNKWFTSSGHLKRH 255
+ Y C C++ F +L+RH
Sbjct: 189 RPYRCEHCDRQFVQVANLRRH 209
Score = 23.4 bits (48), Expect = 1.8
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +1
Query: 193 KTYNCTACNKWFTSSGHLKRHYNTTLHKN 279
+ Y C C+ F+ S LK H +H N
Sbjct: 217 RPYGCEHCSMKFSDSNQLKAH--VLIHTN 243
Score = 22.2 bits (45), Expect = 4.2
Identities = 8/29 (27%), Positives = 14/29 (48%)
Frame = +1
Query: 178 EARRPKTYNCTACNKWFTSSGHLKRHYNT 264
++ R + + C CN+ F L+ H T
Sbjct: 128 DSSRDRPFTCEVCNRSFGYKHVLQNHERT 156
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 27.1 bits (57), Expect = 0.15
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 193 KTYNCTACNKWFTSSGHLKRHYNT 264
K Y C CNK F+ + +L H T
Sbjct: 20 KPYRCIDCNKSFSQAANLTAHVRT 43
Score = 25.8 bits (54), Expect = 0.34
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 193 KTYNCTACNKWFTSSGHLKRH 255
K Y C C F+ SG+L RH
Sbjct: 104 KPYECKLCLLRFSQSGNLNRH 124
Score = 24.2 bits (50), Expect = 1.0
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 169 KSNEARRPKTYNCTACNKWFTSSGHLKRH 255
+++ RP Y C C K F+ S L +H
Sbjct: 70 RTHSGERP--YRCRLCKKAFSDSSTLTKH 96
Score = 22.2 bits (45), Expect = 4.2
Identities = 7/24 (29%), Positives = 12/24 (50%)
Frame = +1
Query: 193 KTYNCTACNKWFTSSGHLKRHYNT 264
K + C C++ F+ S + H T
Sbjct: 48 KPFRCPVCDRRFSQSSSVTTHMRT 71
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 27.1 bits (57), Expect = 0.15
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +1
Query: 166 WKSNEARRPKTYNCTACNKWFTSSGHLKRHYNT 264
W + E RP N C K FT S L+RH T
Sbjct: 338 WHTGE--RPFVCNWLFCGKRFTRSDELQRHLRT 368
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 27.1 bits (57), Expect = 0.15
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +1
Query: 193 KTYNCTACNKWFTSSGHLKRHYNT 264
K Y C CNK F+ + +L H T
Sbjct: 276 KPYRCIDCNKSFSQAANLTAHVRT 299
Score = 25.8 bits (54), Expect = 0.34
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 193 KTYNCTACNKWFTSSGHLKRH 255
K Y C C F+ SG+L RH
Sbjct: 360 KPYECKLCLLRFSQSGNLNRH 380
Score = 24.2 bits (50), Expect = 1.0
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 169 KSNEARRPKTYNCTACNKWFTSSGHLKRH 255
+++ RP Y C C K F+ S L +H
Sbjct: 326 RTHSGERP--YRCRLCKKAFSDSSTLTKH 352
Score = 22.2 bits (45), Expect = 4.2
Identities = 7/24 (29%), Positives = 12/24 (50%)
Frame = +1
Query: 193 KTYNCTACNKWFTSSGHLKRHYNT 264
K + C C++ F+ S + H T
Sbjct: 304 KPFRCPVCDRRFSQSSSVTTHMRT 327
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 25.0 bits (52), Expect = 0.59
Identities = 19/64 (29%), Positives = 22/64 (34%)
Frame = +1
Query: 328 SHHHPSRDAIQNRAQQQNADSNTQSPVPSEDGRSVDESAMQSPYASQNFDRAHRVASMQS 507
SHHH S + +Q A + P G SPYAS H A
Sbjct: 13 SHHHQSGSVAGHHHEQSAAAAAAYRSFPLSLG--------MSPYASSQHHHHHLQARPPQ 64
Query: 508 KSPY 519
SPY
Sbjct: 65 DSPY 68
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 24.2 bits (50), Expect = 1.0
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +1
Query: 193 KTYNCTACNKWFTSSGHLKRH 255
+ Y+C C K F HL+ H
Sbjct: 106 RPYSCDICGKAFRRQDHLRDH 126
>U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein.
Length = 283
Score = 22.6 bits (46), Expect = 3.2
Identities = 17/55 (30%), Positives = 21/55 (38%)
Frame = +1
Query: 334 HHPSRDAIQNRAQQQNADSNTQSPVPSEDGRSVDESAMQSPYASQNFDRAHRVAS 498
HH R I + Q NTQ PV S + A +P + N D V S
Sbjct: 98 HHQIRPPILHDTQPMCESLNTQPPVTS-SSNILQNLADITPNVTPNCDVKSSVCS 151
>U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor
Deformed protein.
Length = 412
Score = 22.6 bits (46), Expect = 3.2
Identities = 17/55 (30%), Positives = 21/55 (38%)
Frame = +1
Query: 334 HHPSRDAIQNRAQQQNADSNTQSPVPSEDGRSVDESAMQSPYASQNFDRAHRVAS 498
HH R I + Q NTQ PV S + A +P + N D V S
Sbjct: 98 HHQIRPPILHDTQPMCESLNTQPPVTS-SSNILQNLADITPNVTPNCDVKSSVCS 151
>AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein.
Length = 412
Score = 22.6 bits (46), Expect = 3.2
Identities = 17/55 (30%), Positives = 21/55 (38%)
Frame = +1
Query: 334 HHPSRDAIQNRAQQQNADSNTQSPVPSEDGRSVDESAMQSPYASQNFDRAHRVAS 498
HH R I + Q NTQ PV S + A +P + N D V S
Sbjct: 98 HHQIRPPILHDTQPMCESLNTQPPVTS-SSNILQNLADITPNVTPNCDVKSSVCS 151
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.308 0.124 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,016
Number of Sequences: 336
Number of extensions: 3579
Number of successful extensions: 22
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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