Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0981
(700 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 34 0.022
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 33 0.030
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 33 0.052
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 32 0.091
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 30 0.28
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 30 0.28
SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces ... 30 0.28
SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inosito... 29 0.48
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 29 0.85
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 28 1.1
SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor, ... 27 2.0
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 27 2.0
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 27 2.0
SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyce... 27 2.0
SPBC1347.06c |cki1||serine/threonine protein kinase Cki1|Schizos... 27 2.6
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 27 2.6
SPBC2F12.15c |||palmitoyltransferase|Schizosaccharomyces pombe|c... 27 2.6
SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces ... 27 2.6
SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|c... 27 2.6
SPBC2D10.06 |rep1|rec16|MBF transcription factor complex subunit... 27 3.4
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 27 3.4
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 27 3.4
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 26 4.5
SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit Srb9... 26 4.5
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 26 4.5
SPAPB1A11.04c |||transcription factor |Schizosaccharomyces pombe... 26 4.5
SPAC1142.04 |||Noc2p-Noc3p complex subunit Noc2 family |Schizosa... 26 6.0
SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr ... 26 6.0
SPBC29A10.01 |ccr1|SPBC365.17|NADPH-cytochrome p450 reductase |S... 25 7.9
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 25 7.9
SPBC36.09 |sap61||U2 snRNP-associated protein sap61|Schizosaccha... 25 7.9
SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pomb... 25 7.9
SPBC337.09 |erg28||Erg28 protein|Schizosaccharomyces pombe|chr 2... 25 7.9
SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|c... 25 7.9
SPAC630.09c |mug58||glycerate kinase |Schizosaccharomyces pombe|... 25 7.9
SPBC31A8.01c |cwl1|rtn1, SPBC651.13c|reticulon-like protein|Schi... 25 7.9
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 25 7.9
SPAC13G6.05c |||TRAPP complex subunit Bet3 |Schizosaccharomyces ... 25 7.9
SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyce... 25 7.9
SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase Ino80|Schizo... 25 7.9
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 33.9 bits (74), Expect = 0.022
Identities = 54/218 (24%), Positives = 83/218 (38%), Gaps = 13/218 (5%)
Frame = +1
Query: 19 YQGPVATTNPDMKPPYRPYDSPAVP-QITSTQPANSTSSNLPTIGGKGANWKSNEARR-- 189
+ P + + PP R +P + TS QP +S PT + + K+ E
Sbjct: 39 FMEPAPVSKKPLPPPTRRLPRKPLPFRSTSLQPPSSQPPAPPTHQREASPVKNIEHSESF 98
Query: 190 PKTYNCTACN-------KWFTSSGHLKRHYNTTLHKNAVRSSGQPDPATMPISSHHHPSR 348
P + + + K G L NTT H V S+ P+ + P + H S
Sbjct: 99 PSVFGTSNNHQIVPLTLKDGNDFGALYASLNTTPHFPQV-SNHAPNNSNSPSLTWHTSSG 157
Query: 349 D-AIQNRAQQQNADSNTQSPVPSEDGRSVDESAMQSPYASQNFDRAHRVASMQSKSPYTH 525
D + QN + ++ SPV SVDE+ + + S + + PY
Sbjct: 158 DDSNQNPFFVRRQSQSSTSPVSD----SVDENLLSA--VSSVTESVETNLHLDQNYPYGS 211
Query: 526 LQQGNLDNNF--SNNPLANHPLQHQVGSHPLNIGSQPP 633
+ + N F SN+ L H VGSH G+ PP
Sbjct: 212 PVRSS-KNPFLSSNSRLPTDDSSHTVGSHSFTSGTHPP 248
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 33.5 bits (73), Expect = 0.030
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Frame = +1
Query: 97 ITSTQPANSTSSNLPTIGGKGANWKSNEARRPK----TYNCT--ACNKWFTSSGHLKRHY 258
+ +T+P + + ++L +G K N S++A+ Y CT CNK FT + +LK H
Sbjct: 534 VRNTRPRSRSLNSL--VGNKSENSSSSKAKSESKSQGNYVCTFAGCNKRFTRAYNLKSHM 591
Query: 259 NT 264
NT
Sbjct: 592 NT 593
Score = 31.1 bits (67), Expect = 0.16
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +1
Query: 193 KTYNCTACNKWFTSSGHLKRHYNTTLHKNAVRSS 294
K + C CN+ F L RHY + + +N +R++
Sbjct: 626 KAFACVTCNQRFARMDALNRHYKSEVGQNCLRTA 659
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 32.7 bits (71), Expect = 0.052
Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 4/120 (3%)
Frame = +1
Query: 205 CTACNKWFTSSGHLKRHYNTTLHKNAVRSSGQPDPATMPISSHHHPSRDAIQNRAQQQNA 384
C CNK F S L+ H N+ HK +R Q I H +++A Q+NA
Sbjct: 272 CMVCNKNFRSQNQLENHENSKKHKKNLRKMNQ------EIKKH---AKEA------QKNA 316
Query: 385 DSNTQ-SPVPSEDGRSVDESAMQSPYASQNFDRAHRV---ASMQSKSPYTHLQQGNLDNN 552
+SN Q PSE S S + +++F+ + + YT + G L+ +
Sbjct: 317 ESNKQPEDAPSESPYS--NKVSSSDFYTRSFEEIEKTFTFVEISDNEFYTASEDGFLNED 374
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 31.9 bits (69), Expect = 0.091
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Frame = +1
Query: 112 PANSTSSNLPTIGGKGANWKSNEA-RRPKTYNCTACNKWFTSSGHLKRH 255
P++ TS++ P A N ++ K Y C C + F HLKRH
Sbjct: 40 PSSVTSNSKPVASSTAAKKDPNAPPQKVKQYVCETCTRAFARLEHLKRH 88
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 30.3 bits (65), Expect = 0.28
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +1
Query: 160 ANWKSNEARRP--KTYNCTACNKWFTSSGHLKRHYNTTLH 273
+N K++ R P K++ C C+K F S HL+RH +LH
Sbjct: 408 SNRKTSVPRSPGGKSFVCPECSKKFKRSEHLRRHIR-SLH 446
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 30.3 bits (65), Expect = 0.28
Identities = 25/89 (28%), Positives = 39/89 (43%)
Frame = +1
Query: 169 KSNEARRPKTYNCTACNKWFTSSGHLKRHYNTTLHKNAVRSSGQPDPATMPISSHHHPSR 348
+S+ +P + +C K FT L RH T L K V P+ T+ ++ H P
Sbjct: 24 RSHTGEKPFECSYPSCKKRFTRRDELIRHVRTHLRKALV----TPE-QTLDVNLHKAPDS 78
Query: 349 DAIQNRAQQQNADSNTQSPVPSEDGRSVD 435
+++ Q AD +S S+DG D
Sbjct: 79 KPEGDKSTGQEAD---KSQNQSKDGSITD 104
>SPBC4B4.03 |rsc1||RSC complex subunit Rsc1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 803
Score = 30.3 bits (65), Expect = 0.28
Identities = 20/88 (22%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = +1
Query: 268 LHKNAVRSSGQPDPATMPISSHHHPSRDAI---QNRAQQQNADSNTQSPVPSEDGRSVDE 438
LH A +S G P PAT ++H PS+ ++ + ++ ++ + +P+ ++D +
Sbjct: 503 LHLLASKSQGLPSPATTDSNTHMLPSQGSLLPPSSISETKSFSTKASTPLSTDDIATPLS 562
Query: 439 SAMQSPYASQNFDRAHRVASMQSKSPYT 522
SA P + A + +S +S ++
Sbjct: 563 SAPNPPSVMPTY--ARKTSSHSERSSHS 588
>SPCC1672.06c |asp1|vip1|inositol hexakisphosphate kinase/inositol
pyrophosphate synthase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 920
Score = 29.5 bits (63), Expect = 0.48
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +1
Query: 61 PYRPYDSPAVPQITSTQPANSTSSNLPTIGGKGANWKSNEARRPKTY 201
PY+ P P + + +P T SN +G GAN E K Y
Sbjct: 697 PYQYLKLPQSPSLIAKEPPQRTDSNGNLVGMTGANTNHTERPLEKLY 743
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 28.7 bits (61), Expect = 0.85
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +1
Query: 121 STSSNLPTIGGKGANWKSNEARRPKTYNCTACNKWFTSSGHLKRHYNT 264
S ++ T G + K+ +A RP Y C C K F H RH T
Sbjct: 2 SEATTATTTGKPSRSTKNPDAPRP--YKCPLCTKAFYRLEHQTRHIRT 47
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with
EF hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.3 bits (60), Expect = 1.1
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +1
Query: 4 PPLVDYQGPVATTNPDMKPPYRPYDSPAVPQITSTQP 114
P + +Q P+ M+P + P +PQ T QP
Sbjct: 467 PQMTGFQQPMVPQRTGMQPQMTGFQQPMMPQRTGLQP 503
Score = 27.9 bits (59), Expect = 1.5
Identities = 11/37 (29%), Positives = 17/37 (45%)
Frame = +1
Query: 4 PPLVDYQGPVATTNPDMKPPYRPYDSPAVPQITSTQP 114
P + +Q P+ M+P + P +PQ T QP
Sbjct: 431 PQMTGFQQPMIPQRTGMQPQMTGFQQPMMPQRTGLQP 467
Score = 25.4 bits (53), Expect = 7.9
Identities = 11/37 (29%), Positives = 15/37 (40%)
Frame = +1
Query: 4 PPLVDYQGPVATTNPDMKPPYRPYDSPAVPQITSTQP 114
P + +Q P+ M+P P PQ T QP
Sbjct: 503 PQMTGFQQPMVPQRTGMQPMMPGLQQPMAPQRTGMQP 539
>SPAC1327.01c ||SPAC1783.09c, SPAC18G6.16c|transcription factor,
zf-fungal binuclear cluster type |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 977
Score = 27.5 bits (58), Expect = 2.0
Identities = 42/175 (24%), Positives = 79/175 (45%), Gaps = 4/175 (2%)
Frame = +1
Query: 67 RPYDSPA-VPQITSTQPANSTS--SNLPTIGGKGANWKSNEARRPKTYNCTACNKWFTSS 237
+P P VP S+ NST+ S+ P + A+ N P + + + + SS
Sbjct: 174 QPLSHPTIVPSSNSSSLLNSTNNISHNPQVSLMSASLSKNLVLDPASPKSVSPDLVYVSS 233
Query: 238 GHLKRHYNTTLHKNAVRSSGQPDPATM-PISSHHHPSRDAIQNRAQQQNADSNTQSPVPS 414
+ + + +++ S + P S+ HPS + Q + SNT + +P+
Sbjct: 234 DNPPVSTAASAYSSSLPISDVTRALPLAPASNSQHPSLSS-----QPVSVPSNTIN-IPT 287
Query: 415 EDGRSVDESAMQSPYASQNFDRAHRVASMQSKSPYTHLQQGNLDNNFSNNPLANH 579
D S+ + Q+P FD ++R++ + + S Y+ + +NF+N P+ANH
Sbjct: 288 -DSLSIVSNPSQTP---AKFD-SNRISQVPN-SDYS------IYSNFNNFPIANH 330
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 27.5 bits (58), Expect = 2.0
Identities = 36/183 (19%), Positives = 60/183 (32%), Gaps = 1/183 (0%)
Frame = +1
Query: 85 AVPQITSTQPANSTSSNLPTIGGKGANWKSNEARRPKTYNCTACNKWFTSSGHLKRHYNT 264
A+P S + + K + S+ P K SS K T
Sbjct: 175 AIPSKPKVSGNMQNKSGVSSYSSKSQSVNSSVTSNPPHTEEPVAAKPEASSTATKGPRPT 234
Query: 265 TLHKNAVRSSGQPDPATMPISSHHHPSRDAIQNRAQQQNADSNTQSPVPSEDGRSVDESA 444
T N S P P + + + N+ + + S PS +
Sbjct: 235 TSASNTNTSPANGAPTNKPSTDINTTDPATQTTQVSASNSPALSGSSTPSNTSSRSNRQN 294
Query: 445 MQSPYASQNFDRAHRVASMQSKSPYTHLQQG-NLDNNFSNNPLANHPLQHQVGSHPLNIG 621
+ +++DR S S + Y+H Q G N +N+ +N + HP + N G
Sbjct: 295 HGNFSEKRHYDRYGN--SHPSYNKYSHYQHGFNYNNSGNNRNESGHPRFRNSRRNYNNQG 352
Query: 622 SQP 630
+ P
Sbjct: 353 AYP 355
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 27.5 bits (58), Expect = 2.0
Identities = 34/162 (20%), Positives = 60/162 (37%), Gaps = 1/162 (0%)
Frame = +1
Query: 91 PQITSTQPANSTSSNLPTIGGKG-ANWKSNEARRPKTYNCTACNKWFTSSGHLKRHYNTT 267
PQ S P+ S L + G N + A K + T N S HLK T+
Sbjct: 311 PQPPSGSPSKKPVSELEELHTAGNVNLSARRALFEKKESSTK-NVENPVSHHLKSPVRTS 369
Query: 268 LHKNAVRSSGQPDPATMPISSHHHPSRDAIQNRAQQQNADSNTQSPVPSEDGRSVDESAM 447
+ +S Q P+T+P+ Q + + +A + V + R +
Sbjct: 370 FPPASTTASKQDSPSTVPVDKQETAKPINKQVSSNETSAQEEPRESVAALRARFAKANVS 429
Query: 448 QSPYASQNFDRAHRVASMQSKSPYTHLQQGNLDNNFSNNPLA 573
++ A +++S SK+ + + NN NP++
Sbjct: 430 ENNDPPTFPKTAAKISSFNSKAGTSFAKPRPFTNN--PNPIS 469
>SPBC4C3.06 |||actin cytoskeletal protein Syp1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 818
Score = 27.5 bits (58), Expect = 2.0
Identities = 29/123 (23%), Positives = 45/123 (36%), Gaps = 2/123 (1%)
Frame = +1
Query: 160 ANWKSNEARRPKTYNCTACNKWFTSSGHLKRHYNTTLHKNAVRSSGQPDPATMPISSHHH 339
+N S P T N + + F + + T+ N VRSS P + +
Sbjct: 342 SNHSSQIRDHPSTNNNASSYQNFNETSDEGEDNDATIRANNVRSSFLEAPLPVQPNVQAE 401
Query: 340 PSRDAIQNRAQQQNADSNTQSPVPSEDGRSVD-ESAMQS-PYASQNFDRAHRVASMQSKS 513
I ++A N ++ S S+D E+A S P D +MQS+S
Sbjct: 402 TVTPKISSKASPFNKPNSVHSEASRNTPSSIDRENASHSNPIMMHGNDFGGNFNNMQSRS 461
Query: 514 PYT 522
T
Sbjct: 462 TTT 464
>SPBC1347.06c |cki1||serine/threonine protein kinase
Cki1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 27.1 bits (57), Expect = 2.6
Identities = 20/109 (18%), Positives = 44/109 (40%), Gaps = 2/109 (1%)
Frame = +1
Query: 82 PAVPQITSTQPANSTSSNLPTIGGKGANWKSN--EARRPKTYNCTACNKWFTSSGHLKRH 255
P P++ S PA ++ + K ++++ E + N+ + +
Sbjct: 322 PPAPKLESKSPALQNHASTQNVVSKRSDYEKPFAEPHLNSASDSAEPNQNSLPNPPTETK 381
Query: 256 YNTTLHKNAVRSSGQPDPATMPISSHHHPSRDAIQNRAQQQNADSNTQS 402
TT+ + ++ QP P + SS +R+ +QN ++ A +S
Sbjct: 382 ATTTVPDRSGLATNQPAPVDVHDSSEERVTREQVQNATKETEAPKKKKS 430
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 27.1 bits (57), Expect = 2.6
Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Frame = +1
Query: 250 RHYNTTLHKNAVRSSGQPDPATMPISSHHHPSRDAIQNRAQQQNADSNTQSP-VPSEDGR 426
RHY TL + + + + T I+ +D IQN + S+T S V G
Sbjct: 61 RHYVETLLCMLEQLTIRIEFLTKEIAQQEAAYKD-IQNTQKSLVTQSSTGSANVAYISGN 119
Query: 427 SVDESAM--QSPYASQNFDRAHRVASMQSKSPYTHLQQGNLDNNFSNNPLAN 576
+ + Y++ +F+R +R A +QSK L+ + S++P A+
Sbjct: 120 GPGDRSFIDDGNYSASSFERQNRTAPLQSKVTTASLKPNIPRTSMSSSPTAS 171
>SPBC2F12.15c |||palmitoyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 329
Score = 27.1 bits (57), Expect = 2.6
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +1
Query: 82 PAVPQITSTQPANSTSSNLPTIGGKGANW-KSNEARRPKTYNCTACNKWFTSSGH 243
P P TS P NST + GK K E + ++++C+ CNK H
Sbjct: 72 PGSPSETSFDP-NSTRQYMTLQNGKSRFCEKCQEYKCDRSHHCSQCNKCILRMDH 125
>SPCC4G3.12c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 821
Score = 27.1 bits (57), Expect = 2.6
Identities = 40/146 (27%), Positives = 59/146 (40%), Gaps = 12/146 (8%)
Frame = +1
Query: 265 TLHKNAVRSSGQPDPATMPISSHH--HPSRDAIQNRAQQQNADSNTQS----PVPSEDGR 426
T H+ +SG P I S+ HP +R + ++ T S P S G
Sbjct: 114 TYHEYEEGTSGN-SPLRRAIGSYDFLHPRPSGNSSRLDRNSSRPFTSSFHSAPFLSSYGS 172
Query: 427 SVDESAMQ----SPYASQNFDRAHRVASMQSKSPY-THLQQGNLDNNFSNNP-LANHPLQ 588
S D S + S ++ N + S+ ++ P T L+ L NN N+P L NH L+
Sbjct: 173 SNDPSQERVNEYSLPSNSNSTYTTPLQSINNEHPLPTVLENNALLNNSGNSPSLINH-LR 231
Query: 589 HQVGSHPLNIGSQPPGIGISNDNGHQ 666
+ + P I SNDN Q
Sbjct: 232 QYLNQDFSRLHQSPSPIPNSNDNDSQ 257
>SPAC31A2.12 |||arrestin/PY protein 1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 596
Score = 27.1 bits (57), Expect = 2.6
Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
Frame = +1
Query: 388 SNTQSPVPSEDGRSVDESAMQSPYASQNFDRAHRVASMQSKSPYTHLQQGNLDNNFS-NN 564
SN +P+PS +M+ YAS R +A + ++ QG N S +N
Sbjct: 362 SNLDTPLPSGATTPRRRDSMEPTYASNEAHRRQLIAGL-TELALQQQPQGRSPNEHSPSN 420
Query: 565 PLANHPLQHQVGSHP 609
+ P +GS+P
Sbjct: 421 HPEDFPPSFSLGSNP 435
>SPBC2D10.06 |rep1|rec16|MBF transcription factor complex subunit
Rep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 472
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 385 DSNTQSPVPSEDGRSVDESAMQSPYASQNFDRAHRVASMQSKSPY 519
D N S+D S SP ++ F R+H++ S ++KSP+
Sbjct: 42 DLNVSMLTKSDDVGKTPFSIFDSP-SNPGFSRSHQMCSDKNKSPF 85
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 26.6 bits (56), Expect = 3.4
Identities = 22/91 (24%), Positives = 33/91 (36%), Gaps = 2/91 (2%)
Frame = +1
Query: 199 YNCT--ACNKWFTSSGHLKRHYNTTLHKNAVRSSGQPDPATMPISSHHHPSRDAIQNRAQ 372
Y C C K FT H +RH+ + + A T + H + Q +
Sbjct: 17 YKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVN----QKHVK 72
Query: 373 QQNADSNTQSPVPSEDGRSVDESAMQSPYAS 465
Q +A S T P D + S + P+ S
Sbjct: 73 QNDAGSQTH---PKHDKTLISSSDQELPFPS 100
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 26.6 bits (56), Expect = 3.4
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 3/40 (7%)
Frame = +1
Query: 169 KSNEARRPKT---YNCTACNKWFTSSGHLKRHYNTTLHKN 279
K NE + K NC CNK F S G H + H++
Sbjct: 57 KQNEEVQKKAEFYQNCEVCNKKFYSEGAYSSHMASKKHRD 96
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 26.2 bits (55), Expect = 4.5
Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
Frame = +1
Query: 193 KTYNCT--ACNKWFTSSGHLKRH 255
KTY+C C K FT S LK+H
Sbjct: 234 KTYHCPMEGCKKSFTRSSALKKH 256
>SPAC589.02c |med13|spTrap240, srb9|mediator complex subunit
Srb9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1223
Score = 26.2 bits (55), Expect = 4.5
Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +1
Query: 412 SEDGRSVDESAMQSPYASQNFDRAHRVASMQS-KSPYTHLQQGNLDNNFSNNPLANHPLQ 588
+E S DE + + Q+F + S K+P +Q N D+N+ LA+ L
Sbjct: 557 AESVTSTDEDICSTNFIQQDFTMEYNHDFFSSSKTPTNISEQSNPDSNYDTLSLAHQVLM 616
Query: 589 HQ 594
++
Sbjct: 617 NE 618
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 26.2 bits (55), Expect = 4.5
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
Frame = +1
Query: 61 PYRPYDSPAVPQITSTQPANSTSSNLPTIGGKG---ANWKSNEARRPKTYNCTACNKWFT 231
P +S ++ST P+ +TSS LPT ++ S A + T+ N
Sbjct: 504 PLTSANSTTSTSVSSTAPSYNTSSVLPTSSVSSTPLSSANSTTATSASSTPLTSVNSTTA 563
Query: 232 SSGHLKRHYNTTLHKNAVRSSGQ 300
+S N+T+ +A S+G+
Sbjct: 564 TSASSTPFGNSTITSSASGSTGE 586
>SPAPB1A11.04c |||transcription factor |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 697
Score = 26.2 bits (55), Expect = 4.5
Identities = 23/109 (21%), Positives = 44/109 (40%)
Frame = +1
Query: 85 AVPQITSTQPANSTSSNLPTIGGKGANWKSNEARRPKTYNCTACNKWFTSSGHLKRHYNT 264
A+ + S N + N T+G +W E +R + C + S+G++
Sbjct: 235 ALRMVDSLDLGNEINDNPLTMGSNTVSWTEAEQKRRVYWACFFVER-LLSTGYMAPSKLR 293
Query: 265 TLHKNAVRSSGQPDPATMPISSHHHPSRDAIQNRAQQQNADSNTQSPVP 411
+L + ++S Q P P + P + + + +N S+T S P
Sbjct: 294 SLSLSLQKTSIQL-PCPEPNFLFNQPILTELFDGSLPENTQSDTTSMAP 341
>SPAC1142.04 |||Noc2p-Noc3p complex subunit Noc2 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 707
Score = 25.8 bits (54), Expect = 6.0
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = +2
Query: 83 QQCHKLLVLNRLIQHRQIYQQLVEKEPTGNQMKQEDLKHTIARLAISGSLAL 238
QQ KLL N + Q Q + N+ + EDLK+TI+ + L L
Sbjct: 183 QQWQKLLETNHSLTTLQKVVQAFKAAAFLNEEEAEDLKYTISDSKVFNDLLL 234
>SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1337
Score = 25.8 bits (54), Expect = 6.0
Identities = 31/150 (20%), Positives = 53/150 (35%), Gaps = 10/150 (6%)
Frame = +1
Query: 112 PANSTSSNLPTIGGKGANWKSNEARRPKTYNCTACNKWFTSSGHLKRHYNTTLHKNAVRS 291
P + SNL + +N S E+ + + ++ + + K + +
Sbjct: 2 PTSGAPSNLDRANAQLSNTSSTESSSSNNSSTASGSRHVKIESNRVSLPPLKIQKGSFPA 61
Query: 292 SGQPDPATMPISSHHHPSRDAIQNRAQQQNADSN------TQSPVPSEDGRSVDESAM-- 447
QP ++ S H S Q+ Q + +N P PS + ++
Sbjct: 62 IRQPTESSTHFQSSHSVSNAHNQSPLNQSQSSANPVTFEIADEPSPSFNHSFFEKDNARD 121
Query: 448 --QSPYASQNFDRAHRVASMQSKSPYTHLQ 531
Q P SQN + +S QS THLQ
Sbjct: 122 IPQQPSHSQNPSSSSSSSSSQSSQHSTHLQ 151
Score = 25.8 bits (54), Expect = 6.0
Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +1
Query: 325 SSHHHPSRDAIQNRAQQQNADSNTQSPVPSEDGRSVDE-SAMQSP--YASQNFDRAHR 489
S +PS + + +Q ++ Q +PS + +S+D+ S + P ++ N R +R
Sbjct: 127 SHSQNPSSSSSSSSSQSSQHSTHLQFQIPSNEKKSLDDPSPRRKPSFFSKSNLKRKYR 184
>SPBC29A10.01 |ccr1|SPBC365.17|NADPH-cytochrome p450 reductase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 678
Score = 25.4 bits (53), Expect = 7.9
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = +2
Query: 83 QQCHKLLVLNRLIQHRQIYQQLVEK 157
+Q HK+ V +RL++H +LVE+
Sbjct: 604 EQDHKIYVQHRLLEHSDTIAKLVEE 628
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 193 KTYNCTACNKWFTSSGHLKRH 255
K ++C+ CN+ F S L RH
Sbjct: 54 KAFSCSFCNRAFARSDVLNRH 74
>SPBC36.09 |sap61||U2 snRNP-associated protein
sap61|Schizosaccharomyces pombe|chr 2|||Manual
Length = 492
Score = 25.4 bits (53), Expect = 7.9
Identities = 10/41 (24%), Positives = 17/41 (41%)
Frame = +1
Query: 193 KTYNCTACNKWFTSSGHLKRHYNTTLHKNAVRSSGQPDPAT 315
+ + C C K+F + H + H AV+ P+T
Sbjct: 241 EAFYCEVCQKFFGKITVFEAHKKSKAHNKAVKRMQSSSPST 281
>SPAC1486.05 |nup189||nucleoporin Nup189|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1778
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +2
Query: 119 IQHRQIYQQLVEKEPTGNQMKQEDLKHTIARLAISGSLA 235
++ R IY + K+P G ++ + L T L +SG+ A
Sbjct: 1211 VKIRSIYDFIPTKDPNGTKLLEYQLDQTEVYLDLSGTHA 1249
>SPBC337.09 |erg28||Erg28 protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 136
Score = 25.4 bits (53), Expect = 7.9
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -1
Query: 208 CNCMF*VFLLHLISSWLLF 152
C C + + H +S WLLF
Sbjct: 83 CQCTYYLACFHFLSEWLLF 101
>SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 25.4 bits (53), Expect = 7.9
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +1
Query: 76 DSPAVPQITSTQPANSTSSNLPT 144
+ P P T+PA ST N PT
Sbjct: 310 NKPTAPNSAFTKPATSTGDNKPT 332
>SPAC630.09c |mug58||glycerate kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 277
Score = 25.4 bits (53), Expect = 7.9
Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 1/58 (1%)
Frame = +1
Query: 409 PSEDGRSVDESAMQSPYASQNFDRAHRVASMQSKSPY-THLQQGNLDNNFSNNPLANH 579
P G+S SA+ + +N V Y TH +Q L N NNPL H
Sbjct: 33 PQGSGKSTLASALDTELTRKN----ESVVKFSLDDFYLTHAEQVELAKNNPNNPLVQH 86
>SPBC31A8.01c |cwl1|rtn1, SPBC651.13c|reticulon-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 308
Score = 25.4 bits (53), Expect = 7.9
Identities = 17/85 (20%), Positives = 35/85 (41%)
Frame = +1
Query: 307 PATMPISSHHHPSRDAIQNRAQQQNADSNTQSPVPSEDGRSVDESAMQSPYASQNFDRAH 486
P+T S+ PS QN S++ P + + S+ P + +
Sbjct: 41 PSTELPSATSFPSALPNSENPVIQNISSSSSEPHHTSQSTPGETSSPVCPVSGAHGGADK 100
Query: 487 RVASMQSKSPYTHLQQGNLDNNFSN 561
+ ++++ P+T+ + N+D SN
Sbjct: 101 KCPALEAGCPFTNTTKQNVDPEISN 125
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.4 bits (53), Expect = 7.9
Identities = 47/185 (25%), Positives = 68/185 (36%), Gaps = 12/185 (6%)
Frame = +1
Query: 76 DSPAVPQITSTQPANSTSSNLPTIGGKGANWKSNEARRPKTYNCTACNKWFTSSGHLKRH 255
D PAVP+I S P T S + NE PK N ++ S+G R+
Sbjct: 759 DLPAVPRIFSPPPLPKTPS---------GEFGDNEFMFPKKSNRVRGHQSRPSTGSQLRN 809
Query: 256 YNTTLHKNAVRSSGQ---PDPATMPISSHHHPSRDAIQNRAQQQNAD---------SNTQ 399
+ + V S G+ PD P SS HP N D S
Sbjct: 810 ---VVPVSIVTSGGRPALPDEMASPSSSIGHPLPSPPPADFNSLNVDFYEPHSYLESPAP 866
Query: 400 SPVPSEDGRSVDESAMQSPYASQNFDRAHRVASMQSKSPYTHLQQGNLDNNFSNNPLANH 579
P PS + S + + + +P S + H S + P L+Q ++ S P+A+
Sbjct: 867 EPQPSYEEESFNATVIHAPTPSTATFQGHPTISNVATPP---LKQDVTESKAS--PVADA 921
Query: 580 PLQHQ 594
HQ
Sbjct: 922 SATHQ 926
>SPAC13G6.05c |||TRAPP complex subunit Bet3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 245
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +1
Query: 43 NPDMKPPYRPYDSPAVPQITSTQPANS 123
NP P +P S + TST+PANS
Sbjct: 167 NPTQTSPGKPSTSESSQTDTSTRPANS 193
>SPBC1271.14 |||glutamate N-acetyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 445
Score = 25.4 bits (53), Expect = 7.9
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +1
Query: 370 QQQNADSNTQSPVPSEDGRSVDESAMQSPYASQNF 474
+ QN D S + S+D +VD PYA N+
Sbjct: 394 EPQNVDETRASEILSQDELTVDVDLGCGPYAKTNW 428
>SPAC29B12.01 |ino80|SPAC3G6.12|SNF2 family helicase
Ino80|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1604
Score = 25.4 bits (53), Expect = 7.9
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 463 SQNFDRAHRVASMQSKSPYTHLQQGNLD 546
SQ DRAHR+ + + Y + +G ++
Sbjct: 1532 SQAMDRAHRIGQQKQVTVYRFITRGTIE 1559
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.308 0.124 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,734,166
Number of Sequences: 5004
Number of extensions: 55977
Number of successful extensions: 225
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 224
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 323158234
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
- SilkBase 1999-2023 -