Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0981
(700 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein ... 36 0.026
At4g14910.1 68417.m02291 imidazoleglycerol-phosphate dehydratase... 36 0.034
At3g22270.1 68416.m02815 expressed protein 35 0.060
At2g42410.1 68415.m05249 zinc finger (C2H2 type) family protein ... 34 0.10
At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein ... 33 0.18
At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3... 32 0.42
At2g45160.1 68415.m05622 scarecrow transcription factor family p... 32 0.42
At2g36930.1 68415.m04529 zinc finger (C2H2 type) family protein ... 32 0.42
At2g24500.1 68415.m02927 zinc finger (C2H2 type) family protein ... 31 0.56
At1g15780.1 68414.m01893 expressed protein 31 0.56
At2g03000.1 68415.m00252 zinc finger (C3HC4-type RING finger) fa... 30 1.3
At5g62070.1 68418.m07790 calmodulin-binding family protein conta... 30 1.7
At5g24880.1 68418.m02946 expressed protein ; expression supporte... 30 1.7
At2g45910.1 68415.m05709 protein kinase family protein / U-box d... 30 1.7
At5g43540.1 68418.m05323 zinc finger (C2H2 type) family protein ... 29 2.2
At3g18810.1 68416.m02389 protein kinase family protein contains ... 29 2.2
At5g03800.1 68418.m00347 exostosin family protein / pentatricope... 29 3.0
At2g35110.1 68415.m04307 HEM protein-related weak similarity to ... 29 3.0
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 29 3.0
At5g62210.1 68418.m07811 embryo-specific protein-related contain... 29 3.9
At5g08200.1 68418.m00959 peptidoglycan-binding LysM domain-conta... 29 3.9
At3g23130.1 68416.m02915 superman protein (SUP) / zinc finger (C... 29 3.9
At1g72650.2 68414.m08402 myb family transcription factor contain... 29 3.9
At1g72650.1 68414.m08401 myb family transcription factor contain... 29 3.9
At1g68670.1 68414.m07846 myb family transcription factor contain... 29 3.9
At1g55540.1 68414.m06356 proline-rich family protein contains pr... 29 3.9
At1g30280.1 68414.m03703 expressed protein contains low similari... 29 3.9
At1g23540.1 68414.m02960 protein kinase family protein contains ... 29 3.9
At3g61490.2 68416.m06887 glycoside hydrolase family 28 protein /... 28 5.2
At3g61490.1 68416.m06886 glycoside hydrolase family 28 protein /... 28 5.2
At3g31410.1 68416.m04010 hypothetical protein similar to hypothe... 28 5.2
At5g56890.1 68418.m07099 protein kinase family protein contains ... 28 6.8
At4g31420.2 68417.m04461 zinc finger (C2H2 type) family protein ... 28 6.8
At4g31420.1 68417.m04460 zinc finger (C2H2 type) family protein ... 28 6.8
At4g27850.1 68417.m03999 proline-rich family protein contains pr... 28 6.8
At3g50370.1 68416.m05508 expressed protein 28 6.8
At3g18010.1 68416.m02289 homeobox-leucine zipper transcription f... 28 6.8
At3g13990.1 68416.m01766 hydroxyproline-rich glycoprotein family... 28 6.8
At2g15690.1 68415.m01796 pentatricopeptide (PPR) repeat-containi... 28 6.8
At1g71770.1 68414.m08295 polyadenylate-binding protein 5 (PABP5)... 28 6.8
At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 27 9.0
At4g33510.1 68417.m04759 2-dehydro-3-deoxyphosphoheptonate aldol... 27 9.0
At4g12450.1 68417.m01970 expressed protein 27 9.0
At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containi... 27 9.0
At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein ... 27 9.0
At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein ... 27 9.0
>At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 292
Score = 35.9 bits (79), Expect = 0.026
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Frame = +1
Query: 172 SNEARRP-KTYNCTACNKWFTSS----GHLKRHYNTTLHKNAVRSSGQPDPATMPISSHH 336
S+ +++P KT+ C+ C F+S GH++RH T++ NA + + SSHH
Sbjct: 182 SDGSKKPEKTHECSICKAEFSSGQALGGHMRRHRGLTINANATSAI----KTAISSSSHH 237
Query: 337 H 339
H
Sbjct: 238 H 238
>At4g14910.1 68417.m02291 imidazoleglycerol-phosphate dehydratase,
putative similar to SP|P34047
Imidazoleglycerol-phosphate dehydratase 1 (EC 4.2.1.19)
(IGPD 1) {Arabidopsis thaliana}; contains Pfam profile
PF00475: imidazoleglycerol-phosphate dehydratase
Length = 272
Score = 35.5 bits (78), Expect = 0.034
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 1/131 (0%)
Frame = +1
Query: 307 PATMPISSHHHPSRDAIQNRAQQQNADSNTQSPVPSEDGRSVDESAMQSPYASQNFDRAH 486
P T SSH P R + N Q + SP P ++G +A SP S
Sbjct: 24 PRTSIASSHPPPPRFLVMNSQSQHRPSISCASPPPGDNGFPAITTA--SPIESARIGEVK 81
Query: 487 RVASMQSKSPYTHLQQGNLDNNFSNNPLANHPLQHQVGSHPL-NIGSQPPGIGISNDNGH 663
R + S +L + ++ + P +H L Q+ SH L ++ + G +D+
Sbjct: 82 RETKETNVSVKINLDGHGVSDSSTGIPFLDHMLD-QLASHGLFDVHVRATGDTHIDDHHT 140
Query: 664 QGSKGVAISTA 696
+AI TA
Sbjct: 141 NEDVALAIGTA 151
>At3g22270.1 68416.m02815 expressed protein
Length = 782
Score = 34.7 bits (76), Expect = 0.060
Identities = 51/222 (22%), Positives = 81/222 (36%), Gaps = 9/222 (4%)
Frame = +1
Query: 28 PVATTNPDMKPP--YRPYDSPAVPQITSTQPANSTSSNLPTIG-GKGANWKSNEARRPK- 195
P +P P +R P Q+T + P+ ++S G +G ++ N R
Sbjct: 187 PPGNRSPQASPGNLHRAPSLPGGSQLTYSAPSPLSNSGFHLSGLSQGPHYGGNLTRYASC 246
Query: 196 --TYNCTACNKWFTSSGHLKRHYNTTLHKNAVRSSGQPDPATMPISSHHHPSRDAIQNRA 369
T W T GHL ++ LH N V+ Q P I S H + Q+ A
Sbjct: 247 GPTLGNMVQPHWVTDPGHLHGDHSGLLH-NLVQQQHQQLPPRNAIMSQHLLALQQRQSYA 305
Query: 370 QQQNADSNTQSPVPSEDGR---SVDESAMQSPYASQNFDRAHRVASMQSKSPYTHLQQGN 540
Q S S PS + V E + + S + R +R S Q+ + +
Sbjct: 306 QLAALQSQLYSSYPSPSRKVPFGVGE-VREHKHKSSHRSRKNRGLSQQTSDAASQKSETG 364
Query: 541 LDNNFSNNPLANHPLQHQVGSHPLNIGSQPPGIGISNDNGHQ 666
L F + + + ++ + N S P + ND HQ
Sbjct: 365 L--QFRSKHMTSEEIESILKMQHSNSHSNDPYV---NDYYHQ 401
>At2g42410.1 68415.m05249 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 214
Score = 33.9 bits (74), Expect = 0.10
Identities = 24/96 (25%), Positives = 43/96 (44%)
Frame = +1
Query: 190 PKTYNCTACNKWFTSSGHLKRHYNTTLHKNAVRSSGQPDPATMPISSHHHPSRDAIQNRA 369
PK Y C+ C + F S+ L H N +H+ R+ + P+ + HH P + N +
Sbjct: 46 PKNYTCSFCRREFRSAQALGGHMN--VHRRD-RAKLRQIPSWLFEPHHHTPIANPNPNFS 102
Query: 370 QQQNADSNTQSPVPSEDGRSVDESAMQSPYASQNFD 477
++ + T PS ++ + +P+ S FD
Sbjct: 103 SSSSSSTTTAHLEPS----LTNQRSKTTPFPSARFD 134
>At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein
(ZAT10) / salt-tolerance zinc finger protein (STZ)
identical to salt-tolerance zinc finger protein
GB:CAA64820 GI:1565227 from [Arabidopsis thaliana];
contains Pfam domain, PF00096: Zinc finger, C2H2 type;
identical to cDNA zinc finger protein STZ/ZAT10
(STZ/ZAT10) GI:9965730
Length = 227
Score = 33.1 bits (72), Expect = 0.18
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Frame = +1
Query: 193 KTYNCTACNKWFTS----SGHLKRHY--NTTLHKNAVRSSGQPDPATMPISSHHHPSRDA 354
K++ CT CNK F S GH + HY N ++ ++V S+ + +T +SS H
Sbjct: 134 KSHVCTICNKSFPSGQALGGHKRCHYEGNNNINTSSV-SNSEGAGSTSHVSSSHRGFDLN 192
Query: 355 IQ--NRAQQQNADSNTQSPVPSEDGR 426
I N D SP+P++ R
Sbjct: 193 IPPIPEFSMVNGDDEVMSPMPAKKPR 218
>At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3)
identical to Cys2/His2-type zinc finger protein 3
[Arabidopsis thaliana] gi|6009889|dbj|BAA85109
Length = 193
Score = 31.9 bits (69), Expect = 0.42
Identities = 26/109 (23%), Positives = 45/109 (41%)
Frame = +1
Query: 100 TSTQPANSTSSNLPTIGGKGANWKSNEARRPKTYNCTACNKWFTSSGHLKRHYNTTLHKN 279
+S Q ++ ++ G G N KS + K++ C+ C K F + L H H +
Sbjct: 85 SSYQALGGHKASHRSLYGGGENDKSTPSTAVKSHVCSVCGKSFATGQALGGH--KRCHYD 142
Query: 280 AVRSSGQPDPATMPISSHHHPSRDAIQNRAQQQNADSNTQSPVPSEDGR 426
S+ + +T +SS H D Q + D SP+ ++ R
Sbjct: 143 GGVSNSEGVGSTSHVSSSSHRGFDLNIIPVQGFSPDDEVMSPMATKKPR 191
>At2g45160.1 68415.m05622 scarecrow transcription factor family
protein
Length = 640
Score = 31.9 bits (69), Expect = 0.42
Identities = 39/129 (30%), Positives = 55/129 (42%), Gaps = 9/129 (6%)
Frame = +1
Query: 247 KRHYNTTLHKNAVRSSGQPDPATMPISSHHHPSRDAIQNRAQQQNADSNTQS-----PVP 411
KR + +LH+ S PDP P+ H N QQQ S++ + PVP
Sbjct: 198 KRFNSGSLHQPVFPLS-DPDPGHDPVRRQHQFQFPFYHNNQQQQFPSSSSSTAVAMVPVP 256
Query: 412 SEDGRSVDESAMQSPYASQNFDRAHRVASM-QSKSPYTHLQQGNLDN-NFSNNPLANH-- 579
S G + D+ QS Q F+ A + + + +T L QG L N N +NH
Sbjct: 257 S-PGMAGDD---QSVIIEQLFNAAELIGTTGNNNGDHTVLAQGILARLNHHLNTSSNHKS 312
Query: 580 PLQHQVGSH 606
P Q + SH
Sbjct: 313 PFQ-RAASH 320
>At2g36930.1 68415.m04529 zinc finger (C2H2 type) family protein
contains Prosite PS00028: Zinc finger, C2H2 type,
domain; weak similarity to Zinc finger protein T86
(Swiss-Prot:O00488) [Homo sapiens]
Length = 198
Score = 31.9 bits (69), Expect = 0.42
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +1
Query: 199 YNCTACNKWFTSSGHLKRHYNTTLHKNAVRSSGQPDP 309
+NC C++ F+++ + H+ T HK V+ +P P
Sbjct: 138 FNCLLCHRNFSNASVMDYHFKTKKHKKRVKKIERPAP 174
>At2g24500.1 68415.m02927 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 395
Score = 31.5 bits (68), Expect = 0.56
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Frame = +1
Query: 160 ANWKSNEARRPKTYNCTACNKWFTSSGHLKRHYNTTLH-KNAVRSSGQPDPATMPISSHH 336
A K P Y+C CNK + SS ++H + H A S+G+ D A I
Sbjct: 55 AQEKVKAVEAPMLYSCGICNKGYRSSKAHEQHLKSKSHVLKASTSTGEEDKA---IIKQL 111
Query: 337 HPSRDAIQNRAQQQNADSNTQS 402
P R N AQ + + +S
Sbjct: 112 PPRRVEKNNTAQLKGSIEEEES 133
>At1g15780.1 68414.m01893 expressed protein
Length = 1335
Score = 31.5 bits (68), Expect = 0.56
Identities = 37/128 (28%), Positives = 54/128 (42%), Gaps = 14/128 (10%)
Frame = +1
Query: 307 PATMP-ISSHHHPSRDAIQNRAQQQNAD-SNTQSPVPSEDGRSVDESAMQSPYASQNFDR 480
P++MP +SS + + ++ N QNA+ N + G+ S M S Q R
Sbjct: 158 PSSMPPVSSITNNNTTSVVN----QNANMQNVAGMLQDSSGQHGLSSNMFSGPQRQMLGR 213
Query: 481 AHRVASMQSKSPYTH---LQQGNLDNNF--SNNPLANHPLQHQVGSHPLNI-------GS 624
H ++S Q + PY + LQQ L NF N P N L + N+ S
Sbjct: 214 PHAMSSQQQQQPYLYQQQLQQQLLKQNFQSGNVPNPNSLLPSHIQQQQQNVLQPNQLHSS 273
Query: 625 QPPGIGIS 648
Q PG+ S
Sbjct: 274 QQPGVPTS 281
>At2g03000.1 68415.m00252 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 535
Score = 30.3 bits (65), Expect = 1.3
Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 2/109 (1%)
Frame = +1
Query: 121 STSSNLPTIGGKGANWKSNEARRPKTYNCTACNKWFTSSGHLKR-HYNTTLHKNAV-RSS 294
+T++NLPT +N +S P+ + + +S G + H++A R++
Sbjct: 25 TTATNLPT---STSNMRSTSLMTPRVAHTS-----MSSGGDFPDDRFFHARHQSATDRAA 76
Query: 295 GQPDPATMPISSHHHPSRDAIQNRAQQQNADSNTQSPVPSEDGRSVDES 441
A MPIS+ + PS + R Q + SP+ S RSV S
Sbjct: 77 SNRSRAIMPISTTNVPSSTSNSPRVLQTSMSRRGTSPMSSSTRRSVQAS 125
>At5g62070.1 68418.m07790 calmodulin-binding family protein contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 403
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/60 (25%), Positives = 26/60 (43%)
Frame = +1
Query: 124 TSSNLPTIGGKGANWKSNEARRPKTYNCTACNKWFTSSGHLKRHYNTTLHKNAVRSSGQP 303
++ N P +G G+ ++ ++ CN ++ S H NT +K VRS P
Sbjct: 278 STENSPQVGSSGSRRRTPFTPTSRSEYSWGCNNYYYSGYHPNYMANTESYKAKVRSQSAP 337
>At5g24880.1 68418.m02946 expressed protein ; expression supported
by MPSS
Length = 443
Score = 29.9 bits (64), Expect = 1.7
Identities = 31/131 (23%), Positives = 46/131 (35%)
Frame = +1
Query: 61 PYRPYDSPAVPQITSTQPANSTSSNLPTIGGKGANWKSNEARRPKTYNCTACNKWFTSSG 240
P R D PAVP+ S+S + KG N + PK + N TSS
Sbjct: 112 PSRSRDRPAVPREKPVTALRSSSFHGSRNVPKGGNTAKSPPVAPKK---SGLNSSSTSSK 168
Query: 241 HLKRHYNTTLHKNAVRSSGQPDPATMPISSHHHPSRDAIQNRAQQQNADSNTQSPVPSED 420
K K A D A+M + H Q +D + + P ++
Sbjct: 169 SKKEGSENVRIKKASDKEIALDSASMSSAQEDHQEEILKVESDHLQVSDHDIEEPKYEKE 228
Query: 421 GRSVDESAMQS 453
+ V E +Q+
Sbjct: 229 EKEVQEKVVQA 239
>At2g45910.1 68415.m05709 protein kinase family protein / U-box
domain-containing protein contains Pfam profiles PF00069
Eukaryotic protein kinase domain, PF04564: U-box
domain; supported by tandem duplication of (GI:3386604)
(TIGR_Ath1:At2g45920) [Arabidopsis thaliana]
Length = 834
Score = 29.9 bits (64), Expect = 1.7
Identities = 25/93 (26%), Positives = 36/93 (38%), Gaps = 11/93 (11%)
Frame = +1
Query: 208 TACNKWFTSSGHLKRHYNTTLH---------KNAVRSSGQPDPATMPISSHHHPSRDAIQ 360
T C WFT G+L T+ + ++ +S + P S H H SR
Sbjct: 189 TLCQIWFTCKGYLIHTREATMDDTESEYASPRPSISASDLLQTFSTPESEHQHISRVQST 248
Query: 361 NRAQQ--QNADSNTQSPVPSEDGRSVDESAMQS 453
+ QQ N S QS S+ + DE +S
Sbjct: 249 DSVQQLVSNGSSTEQSGRVSDGSLNTDEEERES 281
>At5g43540.1 68418.m05323 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 137
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +1
Query: 115 ANSTSSNLPTIGGKGANWKSNEARRPKTYNCTACNKWFTSS----GHLKRHYNTTLHKNA 282
++STSS + + + S + Y CT C + FT++ GH+ H L+K
Sbjct: 7 SSSTSSETGAVRHRRTSSSSVSTVTRRMYECTFCKRGFTNAQALGGHMNIHRRDRLNKAK 66
Query: 283 VRS 291
V++
Sbjct: 67 VQN 69
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 29.5 bits (63), Expect = 2.2
Identities = 25/100 (25%), Positives = 39/100 (39%)
Frame = +1
Query: 379 NADSNTQSPVPSEDGRSVDESAMQSPYASQNFDRAHRVASMQSKSPYTHLQQGNLDNNFS 558
++D+ QS P D S A P S N + + S S+SP + N D N
Sbjct: 21 SSDNQQQSSPPPSDSSSPSPPAPPPPDDSSN--GSPQPPSSDSQSPPSPQGNNNNDGNNG 78
Query: 559 NNPLANHPLQHQVGSHPLNIGSQPPGIGISNDNGHQGSKG 678
NN N+ + ++ N G+ N+N + G
Sbjct: 79 NNNNDNNNNNNGNNNNDNNNGNNKDNNNNGNNNNGNNNNG 118
>At5g03800.1 68418.m00347 exostosin family protein / pentatricopeptide
(PPR) repeat-containing protein contains Pfam profiles:
PF03016 exostosin family, PF01535 PPR repeat
Length = 1388
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +1
Query: 31 VATTNPDMKPPY-----RPYDSPAVPQITSTQPANSTSSNLPTIGG 153
++TT + PP+ P SP +P+I + PA+S S+ + +I G
Sbjct: 926 LSTTTSHLPPPFLSTAPAPAPSPLLPEILPSLPASSLSTKVESIQG 971
>At2g35110.1 68415.m04307 HEM protein-related weak similarity to
Membrane-associated protein Hem (Dhem-2)
(Swiss-Prot:P55162) [Drosophila melanogaster]; weak
similarity to Nck-associated protein 1 (NAP 1) (p125Nap1)
(Membrane-associated protein HEM-2) (Swiss-Prot:P55161)
[Rattus norvegicus]
Length = 1339
Score = 29.1 bits (62), Expect = 3.0
Identities = 33/136 (24%), Positives = 48/136 (35%)
Frame = +1
Query: 292 SGQPDPATMPISSHHHPSRDAIQNRAQQQNADSNTQSPVPSEDGRSVDESAMQSPYASQN 471
S P S +H PS I +N+ + P S +A S Y +
Sbjct: 1208 SNTPSTPLSTASPYHSPSVSLIHASPSMKNSTT----PQRGSGSGSSSTAAPDSGYFKGS 1263
Query: 472 FDRAHRVASMQSKSPYTHLQQGNLDNNFSNNPLANHPLQHQVGSHPLNIGSQPPGIGISN 651
+S+ + YT + GN NN +NN + G PL+ S G SN
Sbjct: 1264 S------SSLYGQEHYTESETGNSRNNENNNNNKQRGSSRRSG--PLDYSSSHKGGSGSN 1315
Query: 652 DNGHQGSKGVAISTAG 699
G A+S +G
Sbjct: 1316 STGPSPLPRFAVSRSG 1331
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 29.1 bits (62), Expect = 3.0
Identities = 38/166 (22%), Positives = 62/166 (37%), Gaps = 3/166 (1%)
Frame = +1
Query: 28 PVATTNPDMKPPYRPYDSPAVPQITSTQPANSTSSNLPTIGGKGANWKSNEARRPKTYNC 207
PVA P PP R P+ P + LP+ G + +N P +
Sbjct: 455 PVAQRLPS--PPPRRAGLPSPPPAQRLPSPPPRRAGLPSPMRIGGSHAANHLESPSPSSL 512
Query: 208 TACN-KWFTSSGHLKRHYNTTLHKNAVRSSGQPDPATMPISSHHHPSRDAIQNRAQQQNA 384
+ K S ++R + T + V S Q T P S ++ R + +
Sbjct: 513 SPPGRKKVLPSPPVRRRRSLTPDEERV-SLSQGGRHTSPSHIKQDGSMSPVRGRGKSSPS 571
Query: 385 DSN--TQSPVPSEDGRSVDESAMQSPYASQNFDRAHRVASMQSKSP 516
+ +SPV V+ + +S AS++ DR R + S+SP
Sbjct: 572 SRHQKARSPVRRRSPTPVNRRSRRSSSASRSPDRRRRRSPSSSRSP 617
>At5g62210.1 68418.m07811 embryo-specific protein-related contains
weak similarity to embryo-specific protein 3
(GI:3335171) [Arabidopsis thaliana]
Length = 223
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +1
Query: 4 PPLVDYQGPVATTNPDMKPPYRPYDSPAVPQITSTQPANSTS 129
PP D+ P + + P PPY P + P++P P ++ S
Sbjct: 159 PPSPDFP-PFSPSIPPPSPPYFPPEPPSIPPPPPPSPPSAAS 199
>At5g08200.1 68418.m00959 peptidoglycan-binding LysM
domain-containing protein contains Pfam profile PF01476:
LysM domain
Length = 409
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +1
Query: 238 GHLKRHYNTTLHKNAVRSSGQPDPATMPISSHHHPSRDAIQNRAQQ--QNADSNTQSP 405
G+ K + + N +P P+T +HH SR + ++ Q+ D+NTQ P
Sbjct: 205 GNYKTETSHHIFNNGDNGYLRPFPSTNTPLNHHRKSRSLVNALIEEVNQSPDNNTQEP 262
>At3g23130.1 68416.m02915 superman protein (SUP) / zinc finger (C2H2
type) family protein identical to superman protein
GB:S60325 from [Arabidopsis thaliana]; contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 204
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 190 PKTYNCTACNKWFTSSGHLKRHYNTTLHKNA-VRSSGQPDPATMPISSHHHPS 345
P++Y C+ C + F S+ L H N A +R P ++ P + +P+
Sbjct: 44 PRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPPYPNPN 96
>At1g72650.2 68414.m08402 myb family transcription factor contains
Pfam PF00249: Myb-like DNA-binding domain
Length = 630
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/75 (24%), Positives = 34/75 (45%)
Frame = +1
Query: 229 TSSGHLKRHYNTTLHKNAVRSSGQPDPATMPISSHHHPSRDAIQNRAQQQNADSNTQSPV 408
+S+ H+ H N H A A + P+R I+ ++ + N +S +
Sbjct: 328 SSTDHVNGHSNGGNHYYASEDYSSEQRAAKRVRK---PTRRYIEELSETDDKQQNDKSVI 384
Query: 409 PSEDGRSVDESAMQS 453
PS+D R ++S ++S
Sbjct: 385 PSKDQRLSEKSEVRS 399
>At1g72650.1 68414.m08401 myb family transcription factor contains
Pfam PF00249: Myb-like DNA-binding domain
Length = 624
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/75 (24%), Positives = 34/75 (45%)
Frame = +1
Query: 229 TSSGHLKRHYNTTLHKNAVRSSGQPDPATMPISSHHHPSRDAIQNRAQQQNADSNTQSPV 408
+S+ H+ H N H A A + P+R I+ ++ + N +S +
Sbjct: 322 SSTDHVNGHSNGGNHYYASEDYSSEQRAAKRVRK---PTRRYIEELSETDDKQQNDKSVI 378
Query: 409 PSEDGRSVDESAMQS 453
PS+D R ++S ++S
Sbjct: 379 PSKDQRLSEKSEVRS 393
>At1g68670.1 68414.m07846 myb family transcription factor contains
Pfam domain, PF00249: Myb-like DNA-binding domain
Length = 354
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 82 PAVPQITSTQPANSTSSNLPTIGGKGANWKSNEARR 189
PAV ++ S+ PA +TSS T GGK K+ + R
Sbjct: 167 PAV-KVASSMPATTTSSTTETCGGKSDLIKAGDEER 201
>At1g55540.1 68414.m06356 proline-rich family protein contains
proline rich extensin domain, INTERPRO:IPR002965
Length = 915
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +1
Query: 28 PVATTNPDMKPPYRPYDSPAVPQ---ITSTQPANSTSSNLP 141
PV++++ D P P S VPQ +TST ++T N+P
Sbjct: 362 PVSSSSQDPVPASIPISSAPVPQTFSVTSTSTVSATGFNVP 402
>At1g30280.1 68414.m03703 expressed protein contains low similarity
to cyclin G-associated kinase GI:1902912 SP|P97874 from
[Rattus norvegicus]
Length = 455
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/65 (30%), Positives = 26/65 (40%)
Frame = +1
Query: 295 GQPDPATMPISSHHHPSRDAIQNRAQQQNADSNTQSPVPSEDGRSVDESAMQSPYASQNF 474
G PA+ P+SS D + Q+ N D + V ED +E M S N
Sbjct: 233 GPSSPASSPVSSFICEEEDDNTHAKQRTNRDCKVEE-VVVEDEEDEEEEEMSSYVIEINS 291
Query: 475 DRAHR 489
DR R
Sbjct: 292 DRFDR 296
>At1g23540.1 68414.m02960 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 720
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
Frame = +1
Query: 1 MPPLVDYQGPVATTNPDMK-----PPYRPYDSPAVPQITSTQPA--NSTSSNLP 141
+PPL D P + ++P + PP +SP+ P+ + T PA N ++ N P
Sbjct: 71 LPPLTDSPPPPSDSSPPVDSTPSPPPPTSNESPSPPEDSETPPAPPNESNDNNP 124
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +1
Query: 4 PPLVDYQGPVATTNPDMKPPYRPYDSPAVPQITSTQPANSTSSN 135
PPL P A+ +P PP P D P I + PA S +N
Sbjct: 150 PPLQSPPAPPAS-DPTNSPPASPLDPTNPPPIQPSGPATSPPAN 192
>At3g61490.2 68416.m06887 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein weak
similarity to SP|P27644 Polygalacturonase (EC 3.2.1.15)
(Pectinase) {Agrobacterium tumefaciens}; contains
PF00295: Glycosyl hydrolases family 28
Length = 476
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 220 KWFTSSGHLKRHYNTTLHKNAVRSSGQ 300
KW T S +L H+ LHK+A+ + Q
Sbjct: 88 KWLTGSFNLTSHFTLFLHKDAILLAAQ 114
>At3g61490.1 68416.m06886 glycoside hydrolase family 28 protein /
polygalacturonase (pectinase) family protein weak
similarity to SP|P27644 Polygalacturonase (EC 3.2.1.15)
(Pectinase) {Agrobacterium tumefaciens}; contains
PF00295: Glycosyl hydrolases family 28
Length = 476
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +1
Query: 220 KWFTSSGHLKRHYNTTLHKNAVRSSGQ 300
KW T S +L H+ LHK+A+ + Q
Sbjct: 88 KWLTGSFNLTSHFTLFLHKDAILLAAQ 114
>At3g31410.1 68416.m04010 hypothetical protein similar to
hypothetical protein GB:CAB77996 GI:7267513 from
[Arabidopsis thaliana]
Length = 315
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/51 (29%), Positives = 21/51 (41%)
Frame = +1
Query: 1 MPPLVDYQGPVATTNPDMKPPYRPYDSPAVPQITSTQPANSTSSNLPTIGG 153
MPPL G +P +P D T+T+ +ST N +GG
Sbjct: 1 MPPLRKKTGLKRRRGTTEEPTTKPIDGGTTEDQTTTEEPSSTKQNPAIVGG 51
>At5g56890.1 68418.m07099 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 1113
Score = 27.9 bits (59), Expect = 6.8
Identities = 34/133 (25%), Positives = 51/133 (38%), Gaps = 10/133 (7%)
Frame = +1
Query: 43 NPDMKPPYRPYDSPAVPQITSTQPANST--SSNLPTIGGKGANWKSNEARRPKTYNCTAC 216
NP P P +SPAV + P S N GA +NE +P
Sbjct: 239 NPPTTHPVFPIESPAVSPDHAANPVKHPPPSDNGDDSKSPGAA-PANETAKPLPVFPHKA 297
Query: 217 NKWFTSSGHLKRHYNTTLHKNAVRSSGQPDPATMPISSHHHPSRDA--------IQNRAQ 372
+ + K +N H + S P P + P + HHHPS + ++ +
Sbjct: 298 SPPSIAPSAPK--FNR--HSHHTSPSTTPPPDSTPSNVHHHPSSPSPPPLSSHHQHHQER 353
Query: 373 QQNADSNTQSPVP 411
++ ADS SP+P
Sbjct: 354 KKIADSPAPSPLP 366
>At4g31420.2 68417.m04461 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 405
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 169 KSNEARRPKTYNCTACNKWFTSSGHLKRHYNTTLH 273
KSNEA P Y C C K + SS ++H + H
Sbjct: 60 KSNEA--PMLYTCAICAKGYRSSKAHEQHLQSRSH 92
>At4g31420.1 68417.m04460 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 404
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 169 KSNEARRPKTYNCTACNKWFTSSGHLKRHYNTTLH 273
KSNEA P Y C C K + SS ++H + H
Sbjct: 60 KSNEA--PMLYTCAICAKGYRSSKAHEQHLQSRSH 92
>At4g27850.1 68417.m03999 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 577
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 37 TTNPDMKPPYRPYDSPAVPQITSTQPANSTSSNLPTIG 150
+++P + PP PY SP +P S P S LP+ G
Sbjct: 158 SSDPPLPPPPPPYPSP-LPPPPSPSPTPGPDSPLPSPG 194
>At3g50370.1 68416.m05508 expressed protein
Length = 2179
Score = 27.9 bits (59), Expect = 6.8
Identities = 29/115 (25%), Positives = 42/115 (36%), Gaps = 1/115 (0%)
Frame = +1
Query: 61 PYRPYDSPAVPQITSTQPANSTSSNLPTIGGKGANWKSNEARR-PKTYNCTACNKWFTSS 237
PY P+ P Q+ Q SNLP+ R P T + SS
Sbjct: 2001 PYMPFSGPPTMQMQKQQEGTD-GSNLPSPQFNNNMLPPPPPNRYPNVQASTVVDAMVDSS 2059
Query: 238 GHLKRHYNTTLHKNAVRSSGQPDPATMPISSHHHPSRDAIQNRAQQQNADSNTQS 402
+ +TT A +S DP + + + P Q + QQ + + NTQS
Sbjct: 2060 N---AYSSTTGAPPAKPTSTLSDPNSNNTQNPNGPGFKPPQQQQQQSSQEKNTQS 2111
>At3g18010.1 68416.m02289 homeobox-leucine zipper transcription
factor family protein similar to wuschel protein
(GI:22087128) [Arabidopsis thaliana]; similar to HB2
homeodomain protein GB:CAA09367 from [Populus tremula x
Populus tremuloides]
Length = 366
Score = 27.9 bits (59), Expect = 6.8
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 1/97 (1%)
Frame = +1
Query: 307 PATMPISSHHHPSRDAIQNRAQQQNADSNTQSPV-PSEDGRSVDESAMQSPYASQNFDRA 483
P + SSHHH R+ I N + SN+ + V S+D +V +++ A+ N +
Sbjct: 246 PPSFYSSSHHHHQRNLILNSPTVSSNMSNSNNAVSASKDTVTVSPVFLRTREAT-NTETC 304
Query: 484 HRVASMQSKSPYTHLQQGNLDNNFSNNPLANHPLQHQ 594
HR +K H N + + L PL+ +
Sbjct: 305 HRNGD-DNKDQEQHEDCSNGELDHQEQTLELFPLRKE 340
>At3g13990.1 68416.m01766 hydroxyproline-rich glycoprotein family
protein
Length = 883
Score = 27.9 bits (59), Expect = 6.8
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Frame = +1
Query: 289 SSGQPDPATMPISSHHH---PSRDAIQNRAQQQNAD--SNTQSPVPSEDGRSVDESAMQS 453
++G DP+ M I+ H + P+ A + QN S+ QSP + G+S + + S
Sbjct: 751 ATGLEDPSRM-INKHGNIYVPNPQAETSEIWMQNPRDLSSLQSPYYNVAGQSPHGAYLSS 809
Query: 454 PYASQNFDRAHRVASMQSKSPYTHLQQGNLDNNFSNNP 567
A Q+F+ + + MQ + + Q G + N P
Sbjct: 810 HTAHQSFNPTAQSSHMQFQGLFHPSQPGTMANPHHMGP 847
>At2g15690.1 68415.m01796 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 579
Score = 27.9 bits (59), Expect = 6.8
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 514 PYTHLQQGNLDNNFSNNPLANHPLQHQVGSHPLNIGSQ 627
P HL N++ NP + P QHQ P + SQ
Sbjct: 45 PIKHLSTSAAANDYHQNPQSGSPSQHQRPYPPQSFDSQ 82
>At1g71770.1 68414.m08295 polyadenylate-binding protein 5 (PABP5)
identical to GB:Q05196 from [Arabidopsis thaliana]
Length = 668
Score = 27.9 bits (59), Expect = 6.8
Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +1
Query: 283 VRSSGQPDPATMPISS-HHHPSRDAIQNRAQQQNADSNTQSPVPSE 417
+RS G P P+S HHHP + N Q VPS+
Sbjct: 420 IRSPGTMSPVPSPMSGFHHHPPGGPMSGPHHPMFIGHNGQGLVPSQ 465
>At5g14920.1 68418.m01750 gibberellin-regulated family protein
similar to SP|P46689 Gibberellin-regulated protein 1
precursor {Arabidopsis thaliana}; contains Pfam profile
PF02704: Gibberellin regulated protein
Length = 275
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = +1
Query: 4 PPLVDYQGPVATTNPDMKPPYRPYDSPAVPQITSTQPANST 126
PP Y+ P T P P +P P +T +P ST
Sbjct: 54 PPTPSYKPPTLPTTPIKPPTTKPPVKPPTIPVTPVKPPVST 94
>At4g33510.1 68417.m04759 2-dehydro-3-deoxyphosphoheptonate aldolase
2 / 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase
2 / DAHP synthetase 2 (DHS2) nearly identical to
SP|Q00218
Length = 507
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +1
Query: 46 PDMKPPYRPYDSPAVPQITSTQPANSTSSNLPTIGGKGANWKSNEARRPKTY 201
P P RP V + ST P ST S ++ +WKS +A + Y
Sbjct: 17 PYRHAPRRPISFSPVFAVHSTDPKKSTQSASASVKWSLESWKSKKALQLPDY 68
>At4g12450.1 68417.m01970 expressed protein
Length = 277
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +1
Query: 325 SSHHHPSRDAIQNRAQQQNADSNTQSPVPSEDGRSVDESAMQSPYASQNF 474
S+ HHP+R ++ RA ++ R+V E QS ++S F
Sbjct: 74 SNSHHPTRRSVSARASSESVLPVLTDLPDGHPSRNVVEIIFQSSWSSDEF 123
>At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 747
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = +1
Query: 151 GKGANWKSNEARRPKTYNCTACNKWFTSSGHLKRHYNTTL 270
G G NWK + + + T N+ LKRHY T L
Sbjct: 625 GNGINWKGQVFSKMRNHTLT--NRMTGVGNTLKRHYETYL 662
>At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +1
Query: 133 NLPTIGGKGANWKSNEARRPKTYNCTACNKWFTSSGHLKRH 255
NLP + + E P T+ CT C K F +L+ H
Sbjct: 222 NLPPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMH 262
>At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +1
Query: 133 NLPTIGGKGANWKSNEARRPKTYNCTACNKWFTSSGHLKRH 255
NLP + + E P T+ CT C K F +L+ H
Sbjct: 222 NLPPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMH 262
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.308 0.124 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,434,788
Number of Sequences: 28952
Number of extensions: 300698
Number of successful extensions: 1110
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1035
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.7 bits)
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