BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0981 (700 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein ... 36 0.026 At4g14910.1 68417.m02291 imidazoleglycerol-phosphate dehydratase... 36 0.034 At3g22270.1 68416.m02815 expressed protein 35 0.060 At2g42410.1 68415.m05249 zinc finger (C2H2 type) family protein ... 34 0.10 At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein ... 33 0.18 At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3... 32 0.42 At2g45160.1 68415.m05622 scarecrow transcription factor family p... 32 0.42 At2g36930.1 68415.m04529 zinc finger (C2H2 type) family protein ... 32 0.42 At2g24500.1 68415.m02927 zinc finger (C2H2 type) family protein ... 31 0.56 At1g15780.1 68414.m01893 expressed protein 31 0.56 At2g03000.1 68415.m00252 zinc finger (C3HC4-type RING finger) fa... 30 1.3 At5g62070.1 68418.m07790 calmodulin-binding family protein conta... 30 1.7 At5g24880.1 68418.m02946 expressed protein ; expression supporte... 30 1.7 At2g45910.1 68415.m05709 protein kinase family protein / U-box d... 30 1.7 At5g43540.1 68418.m05323 zinc finger (C2H2 type) family protein ... 29 2.2 At3g18810.1 68416.m02389 protein kinase family protein contains ... 29 2.2 At5g03800.1 68418.m00347 exostosin family protein / pentatricope... 29 3.0 At2g35110.1 68415.m04307 HEM protein-related weak similarity to ... 29 3.0 At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 29 3.0 At5g62210.1 68418.m07811 embryo-specific protein-related contain... 29 3.9 At5g08200.1 68418.m00959 peptidoglycan-binding LysM domain-conta... 29 3.9 At3g23130.1 68416.m02915 superman protein (SUP) / zinc finger (C... 29 3.9 At1g72650.2 68414.m08402 myb family transcription factor contain... 29 3.9 At1g72650.1 68414.m08401 myb family transcription factor contain... 29 3.9 At1g68670.1 68414.m07846 myb family transcription factor contain... 29 3.9 At1g55540.1 68414.m06356 proline-rich family protein contains pr... 29 3.9 At1g30280.1 68414.m03703 expressed protein contains low similari... 29 3.9 At1g23540.1 68414.m02960 protein kinase family protein contains ... 29 3.9 At3g61490.2 68416.m06887 glycoside hydrolase family 28 protein /... 28 5.2 At3g61490.1 68416.m06886 glycoside hydrolase family 28 protein /... 28 5.2 At3g31410.1 68416.m04010 hypothetical protein similar to hypothe... 28 5.2 At5g56890.1 68418.m07099 protein kinase family protein contains ... 28 6.8 At4g31420.2 68417.m04461 zinc finger (C2H2 type) family protein ... 28 6.8 At4g31420.1 68417.m04460 zinc finger (C2H2 type) family protein ... 28 6.8 At4g27850.1 68417.m03999 proline-rich family protein contains pr... 28 6.8 At3g50370.1 68416.m05508 expressed protein 28 6.8 At3g18010.1 68416.m02289 homeobox-leucine zipper transcription f... 28 6.8 At3g13990.1 68416.m01766 hydroxyproline-rich glycoprotein family... 28 6.8 At2g15690.1 68415.m01796 pentatricopeptide (PPR) repeat-containi... 28 6.8 At1g71770.1 68414.m08295 polyadenylate-binding protein 5 (PABP5)... 28 6.8 At5g14920.1 68418.m01750 gibberellin-regulated family protein si... 27 9.0 At4g33510.1 68417.m04759 2-dehydro-3-deoxyphosphoheptonate aldol... 27 9.0 At4g12450.1 68417.m01970 expressed protein 27 9.0 At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containi... 27 9.0 At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein ... 27 9.0 At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein ... 27 9.0 >At5g03510.1 68418.m00307 zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type Length = 292 Score = 35.9 bits (79), Expect = 0.026 Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 5/61 (8%) Frame = +1 Query: 172 SNEARRP-KTYNCTACNKWFTSS----GHLKRHYNTTLHKNAVRSSGQPDPATMPISSHH 336 S+ +++P KT+ C+ C F+S GH++RH T++ NA + + SSHH Sbjct: 182 SDGSKKPEKTHECSICKAEFSSGQALGGHMRRHRGLTINANATSAI----KTAISSSSHH 237 Query: 337 H 339 H Sbjct: 238 H 238 >At4g14910.1 68417.m02291 imidazoleglycerol-phosphate dehydratase, putative similar to SP|P34047 Imidazoleglycerol-phosphate dehydratase 1 (EC 4.2.1.19) (IGPD 1) {Arabidopsis thaliana}; contains Pfam profile PF00475: imidazoleglycerol-phosphate dehydratase Length = 272 Score = 35.5 bits (78), Expect = 0.034 Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 1/131 (0%) Frame = +1 Query: 307 PATMPISSHHHPSRDAIQNRAQQQNADSNTQSPVPSEDGRSVDESAMQSPYASQNFDRAH 486 P T SSH P R + N Q + SP P ++G +A SP S Sbjct: 24 PRTSIASSHPPPPRFLVMNSQSQHRPSISCASPPPGDNGFPAITTA--SPIESARIGEVK 81 Query: 487 RVASMQSKSPYTHLQQGNLDNNFSNNPLANHPLQHQVGSHPL-NIGSQPPGIGISNDNGH 663 R + S +L + ++ + P +H L Q+ SH L ++ + G +D+ Sbjct: 82 RETKETNVSVKINLDGHGVSDSSTGIPFLDHMLD-QLASHGLFDVHVRATGDTHIDDHHT 140 Query: 664 QGSKGVAISTA 696 +AI TA Sbjct: 141 NEDVALAIGTA 151 >At3g22270.1 68416.m02815 expressed protein Length = 782 Score = 34.7 bits (76), Expect = 0.060 Identities = 51/222 (22%), Positives = 81/222 (36%), Gaps = 9/222 (4%) Frame = +1 Query: 28 PVATTNPDMKPP--YRPYDSPAVPQITSTQPANSTSSNLPTIG-GKGANWKSNEARRPK- 195 P +P P +R P Q+T + P+ ++S G +G ++ N R Sbjct: 187 PPGNRSPQASPGNLHRAPSLPGGSQLTYSAPSPLSNSGFHLSGLSQGPHYGGNLTRYASC 246 Query: 196 --TYNCTACNKWFTSSGHLKRHYNTTLHKNAVRSSGQPDPATMPISSHHHPSRDAIQNRA 369 T W T GHL ++ LH N V+ Q P I S H + Q+ A Sbjct: 247 GPTLGNMVQPHWVTDPGHLHGDHSGLLH-NLVQQQHQQLPPRNAIMSQHLLALQQRQSYA 305 Query: 370 QQQNADSNTQSPVPSEDGR---SVDESAMQSPYASQNFDRAHRVASMQSKSPYTHLQQGN 540 Q S S PS + V E + + S + R +R S Q+ + + Sbjct: 306 QLAALQSQLYSSYPSPSRKVPFGVGE-VREHKHKSSHRSRKNRGLSQQTSDAASQKSETG 364 Query: 541 LDNNFSNNPLANHPLQHQVGSHPLNIGSQPPGIGISNDNGHQ 666 L F + + + ++ + N S P + ND HQ Sbjct: 365 L--QFRSKHMTSEEIESILKMQHSNSHSNDPYV---NDYYHQ 401 >At2g42410.1 68415.m05249 zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type Length = 214 Score = 33.9 bits (74), Expect = 0.10 Identities = 24/96 (25%), Positives = 43/96 (44%) Frame = +1 Query: 190 PKTYNCTACNKWFTSSGHLKRHYNTTLHKNAVRSSGQPDPATMPISSHHHPSRDAIQNRA 369 PK Y C+ C + F S+ L H N +H+ R+ + P+ + HH P + N + Sbjct: 46 PKNYTCSFCRREFRSAQALGGHMN--VHRRD-RAKLRQIPSWLFEPHHHTPIANPNPNFS 102 Query: 370 QQQNADSNTQSPVPSEDGRSVDESAMQSPYASQNFD 477 ++ + T PS ++ + +P+ S FD Sbjct: 103 SSSSSSTTTAHLEPS----LTNQRSKTTPFPSARFD 134 >At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein (ZAT10) / salt-tolerance zinc finger protein (STZ) identical to salt-tolerance zinc finger protein GB:CAA64820 GI:1565227 from [Arabidopsis thaliana]; contains Pfam domain, PF00096: Zinc finger, C2H2 type; identical to cDNA zinc finger protein STZ/ZAT10 (STZ/ZAT10) GI:9965730 Length = 227 Score = 33.1 bits (72), Expect = 0.18 Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 8/86 (9%) Frame = +1 Query: 193 KTYNCTACNKWFTS----SGHLKRHY--NTTLHKNAVRSSGQPDPATMPISSHHHPSRDA 354 K++ CT CNK F S GH + HY N ++ ++V S+ + +T +SS H Sbjct: 134 KSHVCTICNKSFPSGQALGGHKRCHYEGNNNINTSSV-SNSEGAGSTSHVSSSHRGFDLN 192 Query: 355 IQ--NRAQQQNADSNTQSPVPSEDGR 426 I N D SP+P++ R Sbjct: 193 IPPIPEFSMVNGDDEVMSPMPAKKPR 218 >At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3) identical to Cys2/His2-type zinc finger protein 3 [Arabidopsis thaliana] gi|6009889|dbj|BAA85109 Length = 193 Score = 31.9 bits (69), Expect = 0.42 Identities = 26/109 (23%), Positives = 45/109 (41%) Frame = +1 Query: 100 TSTQPANSTSSNLPTIGGKGANWKSNEARRPKTYNCTACNKWFTSSGHLKRHYNTTLHKN 279 +S Q ++ ++ G G N KS + K++ C+ C K F + L H H + Sbjct: 85 SSYQALGGHKASHRSLYGGGENDKSTPSTAVKSHVCSVCGKSFATGQALGGH--KRCHYD 142 Query: 280 AVRSSGQPDPATMPISSHHHPSRDAIQNRAQQQNADSNTQSPVPSEDGR 426 S+ + +T +SS H D Q + D SP+ ++ R Sbjct: 143 GGVSNSEGVGSTSHVSSSSHRGFDLNIIPVQGFSPDDEVMSPMATKKPR 191 >At2g45160.1 68415.m05622 scarecrow transcription factor family protein Length = 640 Score = 31.9 bits (69), Expect = 0.42 Identities = 39/129 (30%), Positives = 55/129 (42%), Gaps = 9/129 (6%) Frame = +1 Query: 247 KRHYNTTLHKNAVRSSGQPDPATMPISSHHHPSRDAIQNRAQQQNADSNTQS-----PVP 411 KR + +LH+ S PDP P+ H N QQQ S++ + PVP Sbjct: 198 KRFNSGSLHQPVFPLS-DPDPGHDPVRRQHQFQFPFYHNNQQQQFPSSSSSTAVAMVPVP 256 Query: 412 SEDGRSVDESAMQSPYASQNFDRAHRVASM-QSKSPYTHLQQGNLDN-NFSNNPLANH-- 579 S G + D+ QS Q F+ A + + + +T L QG L N N +NH Sbjct: 257 S-PGMAGDD---QSVIIEQLFNAAELIGTTGNNNGDHTVLAQGILARLNHHLNTSSNHKS 312 Query: 580 PLQHQVGSH 606 P Q + SH Sbjct: 313 PFQ-RAASH 320 >At2g36930.1 68415.m04529 zinc finger (C2H2 type) family protein contains Prosite PS00028: Zinc finger, C2H2 type, domain; weak similarity to Zinc finger protein T86 (Swiss-Prot:O00488) [Homo sapiens] Length = 198 Score = 31.9 bits (69), Expect = 0.42 Identities = 11/37 (29%), Positives = 21/37 (56%) Frame = +1 Query: 199 YNCTACNKWFTSSGHLKRHYNTTLHKNAVRSSGQPDP 309 +NC C++ F+++ + H+ T HK V+ +P P Sbjct: 138 FNCLLCHRNFSNASVMDYHFKTKKHKKRVKKIERPAP 174 >At2g24500.1 68415.m02927 zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type Length = 395 Score = 31.5 bits (68), Expect = 0.56 Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 1/82 (1%) Frame = +1 Query: 160 ANWKSNEARRPKTYNCTACNKWFTSSGHLKRHYNTTLH-KNAVRSSGQPDPATMPISSHH 336 A K P Y+C CNK + SS ++H + H A S+G+ D A I Sbjct: 55 AQEKVKAVEAPMLYSCGICNKGYRSSKAHEQHLKSKSHVLKASTSTGEEDKA---IIKQL 111 Query: 337 HPSRDAIQNRAQQQNADSNTQS 402 P R N AQ + + +S Sbjct: 112 PPRRVEKNNTAQLKGSIEEEES 133 >At1g15780.1 68414.m01893 expressed protein Length = 1335 Score = 31.5 bits (68), Expect = 0.56 Identities = 37/128 (28%), Positives = 54/128 (42%), Gaps = 14/128 (10%) Frame = +1 Query: 307 PATMP-ISSHHHPSRDAIQNRAQQQNAD-SNTQSPVPSEDGRSVDESAMQSPYASQNFDR 480 P++MP +SS + + ++ N QNA+ N + G+ S M S Q R Sbjct: 158 PSSMPPVSSITNNNTTSVVN----QNANMQNVAGMLQDSSGQHGLSSNMFSGPQRQMLGR 213 Query: 481 AHRVASMQSKSPYTH---LQQGNLDNNF--SNNPLANHPLQHQVGSHPLNI-------GS 624 H ++S Q + PY + LQQ L NF N P N L + N+ S Sbjct: 214 PHAMSSQQQQQPYLYQQQLQQQLLKQNFQSGNVPNPNSLLPSHIQQQQQNVLQPNQLHSS 273 Query: 625 QPPGIGIS 648 Q PG+ S Sbjct: 274 QQPGVPTS 281 >At2g03000.1 68415.m00252 zinc finger (C3HC4-type RING finger) family protein contains Pfam profile: PF00097 zinc finger, C3HC4 type (RING finger) Length = 535 Score = 30.3 bits (65), Expect = 1.3 Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 2/109 (1%) Frame = +1 Query: 121 STSSNLPTIGGKGANWKSNEARRPKTYNCTACNKWFTSSGHLKR-HYNTTLHKNAV-RSS 294 +T++NLPT +N +S P+ + + +S G + H++A R++ Sbjct: 25 TTATNLPT---STSNMRSTSLMTPRVAHTS-----MSSGGDFPDDRFFHARHQSATDRAA 76 Query: 295 GQPDPATMPISSHHHPSRDAIQNRAQQQNADSNTQSPVPSEDGRSVDES 441 A MPIS+ + PS + R Q + SP+ S RSV S Sbjct: 77 SNRSRAIMPISTTNVPSSTSNSPRVLQTSMSRRGTSPMSSSTRRSVQAS 125 >At5g62070.1 68418.m07790 calmodulin-binding family protein contains Pfam profile PF00612: IQ calmodulin-binding motif Length = 403 Score = 29.9 bits (64), Expect = 1.7 Identities = 15/60 (25%), Positives = 26/60 (43%) Frame = +1 Query: 124 TSSNLPTIGGKGANWKSNEARRPKTYNCTACNKWFTSSGHLKRHYNTTLHKNAVRSSGQP 303 ++ N P +G G+ ++ ++ CN ++ S H NT +K VRS P Sbjct: 278 STENSPQVGSSGSRRRTPFTPTSRSEYSWGCNNYYYSGYHPNYMANTESYKAKVRSQSAP 337 >At5g24880.1 68418.m02946 expressed protein ; expression supported by MPSS Length = 443 Score = 29.9 bits (64), Expect = 1.7 Identities = 31/131 (23%), Positives = 46/131 (35%) Frame = +1 Query: 61 PYRPYDSPAVPQITSTQPANSTSSNLPTIGGKGANWKSNEARRPKTYNCTACNKWFTSSG 240 P R D PAVP+ S+S + KG N + PK + N TSS Sbjct: 112 PSRSRDRPAVPREKPVTALRSSSFHGSRNVPKGGNTAKSPPVAPKK---SGLNSSSTSSK 168 Query: 241 HLKRHYNTTLHKNAVRSSGQPDPATMPISSHHHPSRDAIQNRAQQQNADSNTQSPVPSED 420 K K A D A+M + H Q +D + + P ++ Sbjct: 169 SKKEGSENVRIKKASDKEIALDSASMSSAQEDHQEEILKVESDHLQVSDHDIEEPKYEKE 228 Query: 421 GRSVDESAMQS 453 + V E +Q+ Sbjct: 229 EKEVQEKVVQA 239 >At2g45910.1 68415.m05709 protein kinase family protein / U-box domain-containing protein contains Pfam profiles PF00069 Eukaryotic protein kinase domain, PF04564: U-box domain; supported by tandem duplication of (GI:3386604) (TIGR_Ath1:At2g45920) [Arabidopsis thaliana] Length = 834 Score = 29.9 bits (64), Expect = 1.7 Identities = 25/93 (26%), Positives = 36/93 (38%), Gaps = 11/93 (11%) Frame = +1 Query: 208 TACNKWFTSSGHLKRHYNTTLH---------KNAVRSSGQPDPATMPISSHHHPSRDAIQ 360 T C WFT G+L T+ + ++ +S + P S H H SR Sbjct: 189 TLCQIWFTCKGYLIHTREATMDDTESEYASPRPSISASDLLQTFSTPESEHQHISRVQST 248 Query: 361 NRAQQ--QNADSNTQSPVPSEDGRSVDESAMQS 453 + QQ N S QS S+ + DE +S Sbjct: 249 DSVQQLVSNGSSTEQSGRVSDGSLNTDEEERES 281 >At5g43540.1 68418.m05323 zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type Length = 137 Score = 29.5 bits (63), Expect = 2.2 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 4/63 (6%) Frame = +1 Query: 115 ANSTSSNLPTIGGKGANWKSNEARRPKTYNCTACNKWFTSS----GHLKRHYNTTLHKNA 282 ++STSS + + + S + Y CT C + FT++ GH+ H L+K Sbjct: 7 SSSTSSETGAVRHRRTSSSSVSTVTRRMYECTFCKRGFTNAQALGGHMNIHRRDRLNKAK 66 Query: 283 VRS 291 V++ Sbjct: 67 VQN 69 >At3g18810.1 68416.m02389 protein kinase family protein contains Pfam PF00069: Protein kinase domain Length = 700 Score = 29.5 bits (63), Expect = 2.2 Identities = 25/100 (25%), Positives = 39/100 (39%) Frame = +1 Query: 379 NADSNTQSPVPSEDGRSVDESAMQSPYASQNFDRAHRVASMQSKSPYTHLQQGNLDNNFS 558 ++D+ QS P D S A P S N + + S S+SP + N D N Sbjct: 21 SSDNQQQSSPPPSDSSSPSPPAPPPPDDSSN--GSPQPPSSDSQSPPSPQGNNNNDGNNG 78 Query: 559 NNPLANHPLQHQVGSHPLNIGSQPPGIGISNDNGHQGSKG 678 NN N+ + ++ N G+ N+N + G Sbjct: 79 NNNNDNNNNNNGNNNNDNNNGNNKDNNNNGNNNNGNNNNG 118 >At5g03800.1 68418.m00347 exostosin family protein / pentatricopeptide (PPR) repeat-containing protein contains Pfam profiles: PF03016 exostosin family, PF01535 PPR repeat Length = 1388 Score = 29.1 bits (62), Expect = 3.0 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 5/46 (10%) Frame = +1 Query: 31 VATTNPDMKPPY-----RPYDSPAVPQITSTQPANSTSSNLPTIGG 153 ++TT + PP+ P SP +P+I + PA+S S+ + +I G Sbjct: 926 LSTTTSHLPPPFLSTAPAPAPSPLLPEILPSLPASSLSTKVESIQG 971 >At2g35110.1 68415.m04307 HEM protein-related weak similarity to Membrane-associated protein Hem (Dhem-2) (Swiss-Prot:P55162) [Drosophila melanogaster]; weak similarity to Nck-associated protein 1 (NAP 1) (p125Nap1) (Membrane-associated protein HEM-2) (Swiss-Prot:P55161) [Rattus norvegicus] Length = 1339 Score = 29.1 bits (62), Expect = 3.0 Identities = 33/136 (24%), Positives = 48/136 (35%) Frame = +1 Query: 292 SGQPDPATMPISSHHHPSRDAIQNRAQQQNADSNTQSPVPSEDGRSVDESAMQSPYASQN 471 S P S +H PS I +N+ + P S +A S Y + Sbjct: 1208 SNTPSTPLSTASPYHSPSVSLIHASPSMKNSTT----PQRGSGSGSSSTAAPDSGYFKGS 1263 Query: 472 FDRAHRVASMQSKSPYTHLQQGNLDNNFSNNPLANHPLQHQVGSHPLNIGSQPPGIGISN 651 +S+ + YT + GN NN +NN + G PL+ S G SN Sbjct: 1264 S------SSLYGQEHYTESETGNSRNNENNNNNKQRGSSRRSG--PLDYSSSHKGGSGSN 1315 Query: 652 DNGHQGSKGVAISTAG 699 G A+S +G Sbjct: 1316 STGPSPLPRFAVSRSG 1331 >At2g29210.1 68415.m03550 splicing factor PWI domain-containing protein contains Pfam profile PF01480: PWI domain Length = 878 Score = 29.1 bits (62), Expect = 3.0 Identities = 38/166 (22%), Positives = 62/166 (37%), Gaps = 3/166 (1%) Frame = +1 Query: 28 PVATTNPDMKPPYRPYDSPAVPQITSTQPANSTSSNLPTIGGKGANWKSNEARRPKTYNC 207 PVA P PP R P+ P + LP+ G + +N P + Sbjct: 455 PVAQRLPS--PPPRRAGLPSPPPAQRLPSPPPRRAGLPSPMRIGGSHAANHLESPSPSSL 512 Query: 208 TACN-KWFTSSGHLKRHYNTTLHKNAVRSSGQPDPATMPISSHHHPSRDAIQNRAQQQNA 384 + K S ++R + T + V S Q T P S ++ R + + Sbjct: 513 SPPGRKKVLPSPPVRRRRSLTPDEERV-SLSQGGRHTSPSHIKQDGSMSPVRGRGKSSPS 571 Query: 385 DSN--TQSPVPSEDGRSVDESAMQSPYASQNFDRAHRVASMQSKSP 516 + +SPV V+ + +S AS++ DR R + S+SP Sbjct: 572 SRHQKARSPVRRRSPTPVNRRSRRSSSASRSPDRRRRRSPSSSRSP 617 >At5g62210.1 68418.m07811 embryo-specific protein-related contains weak similarity to embryo-specific protein 3 (GI:3335171) [Arabidopsis thaliana] Length = 223 Score = 28.7 bits (61), Expect = 3.9 Identities = 13/42 (30%), Positives = 21/42 (50%) Frame = +1 Query: 4 PPLVDYQGPVATTNPDMKPPYRPYDSPAVPQITSTQPANSTS 129 PP D+ P + + P PPY P + P++P P ++ S Sbjct: 159 PPSPDFP-PFSPSIPPPSPPYFPPEPPSIPPPPPPSPPSAAS 199 >At5g08200.1 68418.m00959 peptidoglycan-binding LysM domain-containing protein contains Pfam profile PF01476: LysM domain Length = 409 Score = 28.7 bits (61), Expect = 3.9 Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 2/58 (3%) Frame = +1 Query: 238 GHLKRHYNTTLHKNAVRSSGQPDPATMPISSHHHPSRDAIQNRAQQ--QNADSNTQSP 405 G+ K + + N +P P+T +HH SR + ++ Q+ D+NTQ P Sbjct: 205 GNYKTETSHHIFNNGDNGYLRPFPSTNTPLNHHRKSRSLVNALIEEVNQSPDNNTQEP 262 >At3g23130.1 68416.m02915 superman protein (SUP) / zinc finger (C2H2 type) family protein identical to superman protein GB:S60325 from [Arabidopsis thaliana]; contains Pfam domain, PF00096: Zinc finger, C2H2 type Length = 204 Score = 28.7 bits (61), Expect = 3.9 Identities = 14/53 (26%), Positives = 25/53 (47%), Gaps = 1/53 (1%) Frame = +1 Query: 190 PKTYNCTACNKWFTSSGHLKRHYNTTLHKNA-VRSSGQPDPATMPISSHHHPS 345 P++Y C+ C + F S+ L H N A +R P ++ P + +P+ Sbjct: 44 PRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQSPSSSSTPSPPYPNPN 96 >At1g72650.2 68414.m08402 myb family transcription factor contains Pfam PF00249: Myb-like DNA-binding domain Length = 630 Score = 28.7 bits (61), Expect = 3.9 Identities = 18/75 (24%), Positives = 34/75 (45%) Frame = +1 Query: 229 TSSGHLKRHYNTTLHKNAVRSSGQPDPATMPISSHHHPSRDAIQNRAQQQNADSNTQSPV 408 +S+ H+ H N H A A + P+R I+ ++ + N +S + Sbjct: 328 SSTDHVNGHSNGGNHYYASEDYSSEQRAAKRVRK---PTRRYIEELSETDDKQQNDKSVI 384 Query: 409 PSEDGRSVDESAMQS 453 PS+D R ++S ++S Sbjct: 385 PSKDQRLSEKSEVRS 399 >At1g72650.1 68414.m08401 myb family transcription factor contains Pfam PF00249: Myb-like DNA-binding domain Length = 624 Score = 28.7 bits (61), Expect = 3.9 Identities = 18/75 (24%), Positives = 34/75 (45%) Frame = +1 Query: 229 TSSGHLKRHYNTTLHKNAVRSSGQPDPATMPISSHHHPSRDAIQNRAQQQNADSNTQSPV 408 +S+ H+ H N H A A + P+R I+ ++ + N +S + Sbjct: 322 SSTDHVNGHSNGGNHYYASEDYSSEQRAAKRVRK---PTRRYIEELSETDDKQQNDKSVI 378 Query: 409 PSEDGRSVDESAMQS 453 PS+D R ++S ++S Sbjct: 379 PSKDQRLSEKSEVRS 393 >At1g68670.1 68414.m07846 myb family transcription factor contains Pfam domain, PF00249: Myb-like DNA-binding domain Length = 354 Score = 28.7 bits (61), Expect = 3.9 Identities = 15/36 (41%), Positives = 21/36 (58%) Frame = +1 Query: 82 PAVPQITSTQPANSTSSNLPTIGGKGANWKSNEARR 189 PAV ++ S+ PA +TSS T GGK K+ + R Sbjct: 167 PAV-KVASSMPATTTSSTTETCGGKSDLIKAGDEER 201 >At1g55540.1 68414.m06356 proline-rich family protein contains proline rich extensin domain, INTERPRO:IPR002965 Length = 915 Score = 28.7 bits (61), Expect = 3.9 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%) Frame = +1 Query: 28 PVATTNPDMKPPYRPYDSPAVPQ---ITSTQPANSTSSNLP 141 PV++++ D P P S VPQ +TST ++T N+P Sbjct: 362 PVSSSSQDPVPASIPISSAPVPQTFSVTSTSTVSATGFNVP 402 >At1g30280.1 68414.m03703 expressed protein contains low similarity to cyclin G-associated kinase GI:1902912 SP|P97874 from [Rattus norvegicus] Length = 455 Score = 28.7 bits (61), Expect = 3.9 Identities = 20/65 (30%), Positives = 26/65 (40%) Frame = +1 Query: 295 GQPDPATMPISSHHHPSRDAIQNRAQQQNADSNTQSPVPSEDGRSVDESAMQSPYASQNF 474 G PA+ P+SS D + Q+ N D + V ED +E M S N Sbjct: 233 GPSSPASSPVSSFICEEEDDNTHAKQRTNRDCKVEE-VVVEDEEDEEEEEMSSYVIEINS 291 Query: 475 DRAHR 489 DR R Sbjct: 292 DRFDR 296 >At1g23540.1 68414.m02960 protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain Length = 720 Score = 28.7 bits (61), Expect = 3.9 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 7/54 (12%) Frame = +1 Query: 1 MPPLVDYQGPVATTNPDMK-----PPYRPYDSPAVPQITSTQPA--NSTSSNLP 141 +PPL D P + ++P + PP +SP+ P+ + T PA N ++ N P Sbjct: 71 LPPLTDSPPPPSDSSPPVDSTPSPPPPTSNESPSPPEDSETPPAPPNESNDNNP 124 Score = 28.3 bits (60), Expect = 5.2 Identities = 16/44 (36%), Positives = 20/44 (45%) Frame = +1 Query: 4 PPLVDYQGPVATTNPDMKPPYRPYDSPAVPQITSTQPANSTSSN 135 PPL P A+ +P PP P D P I + PA S +N Sbjct: 150 PPLQSPPAPPAS-DPTNSPPASPLDPTNPPPIQPSGPATSPPAN 192 >At3g61490.2 68416.m06887 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein weak similarity to SP|P27644 Polygalacturonase (EC 3.2.1.15) (Pectinase) {Agrobacterium tumefaciens}; contains PF00295: Glycosyl hydrolases family 28 Length = 476 Score = 28.3 bits (60), Expect = 5.2 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = +1 Query: 220 KWFTSSGHLKRHYNTTLHKNAVRSSGQ 300 KW T S +L H+ LHK+A+ + Q Sbjct: 88 KWLTGSFNLTSHFTLFLHKDAILLAAQ 114 >At3g61490.1 68416.m06886 glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein weak similarity to SP|P27644 Polygalacturonase (EC 3.2.1.15) (Pectinase) {Agrobacterium tumefaciens}; contains PF00295: Glycosyl hydrolases family 28 Length = 476 Score = 28.3 bits (60), Expect = 5.2 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = +1 Query: 220 KWFTSSGHLKRHYNTTLHKNAVRSSGQ 300 KW T S +L H+ LHK+A+ + Q Sbjct: 88 KWLTGSFNLTSHFTLFLHKDAILLAAQ 114 >At3g31410.1 68416.m04010 hypothetical protein similar to hypothetical protein GB:CAB77996 GI:7267513 from [Arabidopsis thaliana] Length = 315 Score = 28.3 bits (60), Expect = 5.2 Identities = 15/51 (29%), Positives = 21/51 (41%) Frame = +1 Query: 1 MPPLVDYQGPVATTNPDMKPPYRPYDSPAVPQITSTQPANSTSSNLPTIGG 153 MPPL G +P +P D T+T+ +ST N +GG Sbjct: 1 MPPLRKKTGLKRRRGTTEEPTTKPIDGGTTEDQTTTEEPSSTKQNPAIVGG 51 >At5g56890.1 68418.m07099 protein kinase family protein contains protein kinase domain, Pfam:PF00069 Length = 1113 Score = 27.9 bits (59), Expect = 6.8 Identities = 34/133 (25%), Positives = 51/133 (38%), Gaps = 10/133 (7%) Frame = +1 Query: 43 NPDMKPPYRPYDSPAVPQITSTQPANST--SSNLPTIGGKGANWKSNEARRPKTYNCTAC 216 NP P P +SPAV + P S N GA +NE +P Sbjct: 239 NPPTTHPVFPIESPAVSPDHAANPVKHPPPSDNGDDSKSPGAA-PANETAKPLPVFPHKA 297 Query: 217 NKWFTSSGHLKRHYNTTLHKNAVRSSGQPDPATMPISSHHHPSRDA--------IQNRAQ 372 + + K +N H + S P P + P + HHHPS + ++ + Sbjct: 298 SPPSIAPSAPK--FNR--HSHHTSPSTTPPPDSTPSNVHHHPSSPSPPPLSSHHQHHQER 353 Query: 373 QQNADSNTQSPVP 411 ++ ADS SP+P Sbjct: 354 KKIADSPAPSPLP 366 >At4g31420.2 68417.m04461 zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type Length = 405 Score = 27.9 bits (59), Expect = 6.8 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +1 Query: 169 KSNEARRPKTYNCTACNKWFTSSGHLKRHYNTTLH 273 KSNEA P Y C C K + SS ++H + H Sbjct: 60 KSNEA--PMLYTCAICAKGYRSSKAHEQHLQSRSH 92 >At4g31420.1 68417.m04460 zinc finger (C2H2 type) family protein contains Pfam profile: PF00096 zinc finger, C2H2 type Length = 404 Score = 27.9 bits (59), Expect = 6.8 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +1 Query: 169 KSNEARRPKTYNCTACNKWFTSSGHLKRHYNTTLH 273 KSNEA P Y C C K + SS ++H + H Sbjct: 60 KSNEA--PMLYTCAICAKGYRSSKAHEQHLQSRSH 92 >At4g27850.1 68417.m03999 proline-rich family protein contains proline-rich extensin domains, INTERPRO:IPR002965 Length = 577 Score = 27.9 bits (59), Expect = 6.8 Identities = 14/38 (36%), Positives = 20/38 (52%) Frame = +1 Query: 37 TTNPDMKPPYRPYDSPAVPQITSTQPANSTSSNLPTIG 150 +++P + PP PY SP +P S P S LP+ G Sbjct: 158 SSDPPLPPPPPPYPSP-LPPPPSPSPTPGPDSPLPSPG 194 >At3g50370.1 68416.m05508 expressed protein Length = 2179 Score = 27.9 bits (59), Expect = 6.8 Identities = 29/115 (25%), Positives = 42/115 (36%), Gaps = 1/115 (0%) Frame = +1 Query: 61 PYRPYDSPAVPQITSTQPANSTSSNLPTIGGKGANWKSNEARR-PKTYNCTACNKWFTSS 237 PY P+ P Q+ Q SNLP+ R P T + SS Sbjct: 2001 PYMPFSGPPTMQMQKQQEGTD-GSNLPSPQFNNNMLPPPPPNRYPNVQASTVVDAMVDSS 2059 Query: 238 GHLKRHYNTTLHKNAVRSSGQPDPATMPISSHHHPSRDAIQNRAQQQNADSNTQS 402 + +TT A +S DP + + + P Q + QQ + + NTQS Sbjct: 2060 N---AYSSTTGAPPAKPTSTLSDPNSNNTQNPNGPGFKPPQQQQQQSSQEKNTQS 2111 >At3g18010.1 68416.m02289 homeobox-leucine zipper transcription factor family protein similar to wuschel protein (GI:22087128) [Arabidopsis thaliana]; similar to HB2 homeodomain protein GB:CAA09367 from [Populus tremula x Populus tremuloides] Length = 366 Score = 27.9 bits (59), Expect = 6.8 Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 1/97 (1%) Frame = +1 Query: 307 PATMPISSHHHPSRDAIQNRAQQQNADSNTQSPV-PSEDGRSVDESAMQSPYASQNFDRA 483 P + SSHHH R+ I N + SN+ + V S+D +V +++ A+ N + Sbjct: 246 PPSFYSSSHHHHQRNLILNSPTVSSNMSNSNNAVSASKDTVTVSPVFLRTREAT-NTETC 304 Query: 484 HRVASMQSKSPYTHLQQGNLDNNFSNNPLANHPLQHQ 594 HR +K H N + + L PL+ + Sbjct: 305 HRNGD-DNKDQEQHEDCSNGELDHQEQTLELFPLRKE 340 >At3g13990.1 68416.m01766 hydroxyproline-rich glycoprotein family protein Length = 883 Score = 27.9 bits (59), Expect = 6.8 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 5/98 (5%) Frame = +1 Query: 289 SSGQPDPATMPISSHHH---PSRDAIQNRAQQQNAD--SNTQSPVPSEDGRSVDESAMQS 453 ++G DP+ M I+ H + P+ A + QN S+ QSP + G+S + + S Sbjct: 751 ATGLEDPSRM-INKHGNIYVPNPQAETSEIWMQNPRDLSSLQSPYYNVAGQSPHGAYLSS 809 Query: 454 PYASQNFDRAHRVASMQSKSPYTHLQQGNLDNNFSNNP 567 A Q+F+ + + MQ + + Q G + N P Sbjct: 810 HTAHQSFNPTAQSSHMQFQGLFHPSQPGTMANPHHMGP 847 >At2g15690.1 68415.m01796 pentatricopeptide (PPR) repeat-containing protein contains Pfam profile PF01535: PPR repeat Length = 579 Score = 27.9 bits (59), Expect = 6.8 Identities = 13/38 (34%), Positives = 17/38 (44%) Frame = +1 Query: 514 PYTHLQQGNLDNNFSNNPLANHPLQHQVGSHPLNIGSQ 627 P HL N++ NP + P QHQ P + SQ Sbjct: 45 PIKHLSTSAAANDYHQNPQSGSPSQHQRPYPPQSFDSQ 82 >At1g71770.1 68414.m08295 polyadenylate-binding protein 5 (PABP5) identical to GB:Q05196 from [Arabidopsis thaliana] Length = 668 Score = 27.9 bits (59), Expect = 6.8 Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 1/46 (2%) Frame = +1 Query: 283 VRSSGQPDPATMPISS-HHHPSRDAIQNRAQQQNADSNTQSPVPSE 417 +RS G P P+S HHHP + N Q VPS+ Sbjct: 420 IRSPGTMSPVPSPMSGFHHHPPGGPMSGPHHPMFIGHNGQGLVPSQ 465 >At5g14920.1 68418.m01750 gibberellin-regulated family protein similar to SP|P46689 Gibberellin-regulated protein 1 precursor {Arabidopsis thaliana}; contains Pfam profile PF02704: Gibberellin regulated protein Length = 275 Score = 27.5 bits (58), Expect = 9.0 Identities = 13/41 (31%), Positives = 17/41 (41%) Frame = +1 Query: 4 PPLVDYQGPVATTNPDMKPPYRPYDSPAVPQITSTQPANST 126 PP Y+ P T P P +P P +T +P ST Sbjct: 54 PPTPSYKPPTLPTTPIKPPTTKPPVKPPTIPVTPVKPPVST 94 >At4g33510.1 68417.m04759 2-dehydro-3-deoxyphosphoheptonate aldolase 2 / 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 2 / DAHP synthetase 2 (DHS2) nearly identical to SP|Q00218 Length = 507 Score = 27.5 bits (58), Expect = 9.0 Identities = 16/52 (30%), Positives = 22/52 (42%) Frame = +1 Query: 46 PDMKPPYRPYDSPAVPQITSTQPANSTSSNLPTIGGKGANWKSNEARRPKTY 201 P P RP V + ST P ST S ++ +WKS +A + Y Sbjct: 17 PYRHAPRRPISFSPVFAVHSTDPKKSTQSASASVKWSLESWKSKKALQLPDY 68 >At4g12450.1 68417.m01970 expressed protein Length = 277 Score = 27.5 bits (58), Expect = 9.0 Identities = 14/50 (28%), Positives = 23/50 (46%) Frame = +1 Query: 325 SSHHHPSRDAIQNRAQQQNADSNTQSPVPSEDGRSVDESAMQSPYASQNF 474 S+ HHP+R ++ RA ++ R+V E QS ++S F Sbjct: 74 SNSHHPTRRSVSARASSESVLPVLTDLPDGHPSRNVVEIIFQSSWSSDEF 123 >At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containing protein contains Pfam profile PF01388: ARID/BRIGHT DNA binding domain Length = 747 Score = 27.5 bits (58), Expect = 9.0 Identities = 14/40 (35%), Positives = 18/40 (45%) Frame = +1 Query: 151 GKGANWKSNEARRPKTYNCTACNKWFTSSGHLKRHYNTTL 270 G G NWK + + + T N+ LKRHY T L Sbjct: 625 GNGINWKGQVFSKMRNHTLT--NRMTGVGNTLKRHYETYL 662 >At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type Length = 499 Score = 27.5 bits (58), Expect = 9.0 Identities = 13/41 (31%), Positives = 18/41 (43%) Frame = +1 Query: 133 NLPTIGGKGANWKSNEARRPKTYNCTACNKWFTSSGHLKRH 255 NLP + + E P T+ CT C K F +L+ H Sbjct: 222 NLPPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMH 262 >At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein contains Pfam domain, PF00096: Zinc finger, C2H2 type Length = 499 Score = 27.5 bits (58), Expect = 9.0 Identities = 13/41 (31%), Positives = 18/41 (43%) Frame = +1 Query: 133 NLPTIGGKGANWKSNEARRPKTYNCTACNKWFTSSGHLKRH 255 NLP + + E P T+ CT C K F +L+ H Sbjct: 222 NLPPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMH 262 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.308 0.124 0.375 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,434,788 Number of Sequences: 28952 Number of extensions: 300698 Number of successful extensions: 1110 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 1035 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1108 length of database: 12,070,560 effective HSP length: 79 effective length of database: 9,783,352 effective search space used: 1496852856 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.1 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 42 (21.7 bits)
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