Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0977
         (389 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    22   2.5  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   5.7  
AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone recepto...    20   7.5  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    20   10.0 
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    20   10.0 
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    20   10.0 
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    20   10.0 
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    20   10.0 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    20   10.0 
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    20   10.0 

>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +1

Query: 262 STINLTKEKFEVILDVQQFTPDEITV 339
           S INL KE+F+ +  +Q+    E+ V
Sbjct: 31  SDINLIKEEFDELGRLQRICNGEVAV 56


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = +1

Query: 85  WWDDWE 102
           WWDD+E
Sbjct: 214 WWDDYE 219



 Score = 20.6 bits (41), Expect = 5.7
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -2

Query: 190 GMN*WRITGRPSSDPCR 140
           G   WR TG  + DP R
Sbjct: 510 GFGRWRETGEAACDPYR 526


>AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone receptor
           (isoform B) protein.
          Length = 96

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 223 RPWRASLARQESSSTI 270
           R W A +A +ESSS +
Sbjct: 3   RRWSARVAPEESSSEV 18


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = +1

Query: 79  RDWWDDWE 102
           RDWW++ E
Sbjct: 96  RDWWNELE 103


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = +1

Query: 79  RDWWDDWE 102
           RDWW++ E
Sbjct: 98  RDWWNELE 105


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = +1

Query: 79  RDWWDDWE 102
           RDWW++ E
Sbjct: 98  RDWWNELE 105


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 223 RPWRASLARQESSSTINLTK 282
           RP+R  L ++  S +  LTK
Sbjct: 76  RPYRCRLCKKAFSDSSTLTK 95


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 223 RPWRASLARQESSSTINLTK 282
           RP+R  L ++  S +  LTK
Sbjct: 332 RPYRCRLCKKAFSDSSTLTK 351


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory
          receptor candidate 59 protein.
          Length = 489

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -3

Query: 93 IPPVAKHHWYYRHLFYL 43
          I  V KH W+   LF L
Sbjct: 6  ITDVLKHVWFLSKLFLL 22


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = +1

Query: 79  RDWWDDWE 102
           RDWW++ E
Sbjct: 96  RDWWNELE 103


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,879
Number of Sequences: 336
Number of extensions: 1354
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8225022
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)