BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0977 (389 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 06_03_0615 - 22761375-22761760,22762218-22765026 29 1.3 03_06_0568 - 34778408-34778710,34779340-34779411,34779549-347796... 29 1.7 03_04_0090 + 17228253-17228403,17229062-17229129,17229238-172309... 29 1.7 05_01_0195 - 1409820-1409966,1410304-1410360,1410774-1410828,141... 28 2.3 07_03_0316 + 16684100-16684339,16684425-16685132,16685241-166859... 27 4.0 08_02_0679 + 20006105-20006488,20006615-20006848,20007929-20008138 27 5.3 03_01_0038 - 340564-341108,341214-341463,341546-341649,341728-34... 27 5.3 04_04_1574 - 34536744-34537136,34541247-34541405,34541497-345424... 27 7.0 04_02_0007 + 8464923-8465155,8466037-8466591,8466645-8467662,846... 27 7.0 03_02_0337 + 7594259-7594319,7594455-7595205,7596323-7596509 27 7.0 01_03_0278 - 14509481-14509506,14510700-14512291,14512547-145126... 27 7.0 10_06_0162 - 11348250-11349531,11349571-11349671 26 9.2 06_01_0295 - 2154069-2155483,2155561-2155708 26 9.2 01_01_0419 - 3146851-3147339,3148428-3148663,3148847-3149793,315... 26 9.2 >06_03_0615 - 22761375-22761760,22762218-22765026 Length = 1064 Score = 29.1 bits (62), Expect = 1.3 Identities = 17/38 (44%), Positives = 21/38 (55%) Frame = -2 Query: 160 PSSDPCRSAGPVVWRGARCAPSHPTSRETSLVLSTSFL 47 PS DP +A P W+G C+P SR SL L +FL Sbjct: 49 PSWDPT-AATPCSWQGVTCSPQ---SRVVSLSLPNTFL 82 >03_06_0568 - 34778408-34778710,34779340-34779411,34779549-34779635, 34779722-34779880,34780641-34780739,34780823-34780903, 34781007-34781461,34781550-34781679,34781952-34782743 Length = 725 Score = 28.7 bits (61), Expect = 1.7 Identities = 12/33 (36%), Positives = 19/33 (57%) Frame = +3 Query: 261 FDDQLDEREI*GYFRRSAIHSRRDHGQGVEQHG 359 +DD+L E+ YFRR S++ G G+ + G Sbjct: 497 YDDELRREELLNYFRRFQSASQKKGGSGIFRQG 529 >03_04_0090 + 17228253-17228403,17229062-17229129,17229238-17230902, 17231002-17231143,17231648-17232399 Length = 925 Score = 28.7 bits (61), Expect = 1.7 Identities = 18/52 (34%), Positives = 29/52 (55%) Frame = -1 Query: 299 ITSNFSFVKLIVEEDSCLAKLALQGLKYEFLKSEVEGNELMEDNRSSFFRPM 144 I S S ++ EEDS LA+ A+QG+K E+ S+ E ++ S F+ + Sbjct: 846 IQSRSSMIRCSEEEDSRLAEDAMQGMK-EWKSSDSERQGIVLAIEKSIFKDL 896 >05_01_0195 - 1409820-1409966,1410304-1410360,1410774-1410828, 1410902-1411002,1411051-1411205,1411395-1411459, 1411545-1411595,1411817-1411893,1412153-1412262, 1412355-1412403,1412528-1412572,1412689-1412813, 1413087-1413228,1413336-1413446 Length = 429 Score = 28.3 bits (60), Expect = 2.3 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 3/68 (4%) Frame = +3 Query: 72 DVSRLV---G*LGAHRAPLQTTGPALRHGSEEGRPVILHQFIPLDLALQKFILQTLEGEL 242 D+ RLV G +G +A L P +R + GRP+ QFI + + + ++ T+ L Sbjct: 268 DLERLVLAAGPIGLMQACLDVAVPYVRQREQFGRPIGEFQFIQVQHFVNRRLVPTITSYL 327 Query: 243 SQTGIFFD 266 G D Sbjct: 328 LMQGKLAD 335 >07_03_0316 + 16684100-16684339,16684425-16685132,16685241-16685939, 16685992-16686053,16686096-16686368,16686622-16686873, 16686954-16687064,16687152-16687212,16687312-16687404, 16687482-16687667 Length = 894 Score = 27.5 bits (58), Expect = 4.0 Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 2/70 (2%) Frame = +3 Query: 144 HGSEEGRPVILHQFIPLDLALQKFILQTLEGELSQTGIFFDDQLDEREI*G--YFRRSAI 317 HGSE R + H D +KF++ +G+ + + DD E+ G YF Sbjct: 577 HGSEVPRVLRSHDSKSKDENKEKFMVTVFKGDKERAKLRDDDPQKAAELAGPTYFTTHDC 636 Query: 318 HSRRDHGQGV 347 + +HG+ + Sbjct: 637 PEKYEHGKAL 646 >08_02_0679 + 20006105-20006488,20006615-20006848,20007929-20008138 Length = 275 Score = 27.1 bits (57), Expect = 5.3 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 1/51 (1%) Frame = +3 Query: 90 G*LGAHRAPLQTTGPALRHGSEEGRPV-ILHQFIPLDLALQKFILQTLEGE 239 G A R +TGPA R GRPV +L F +A +LQ L E Sbjct: 133 GRAAAQRGRRGSTGPASRRQEGGGRPVALLFMFFSWWVAFAGILLQELAPE 183 >03_01_0038 - 340564-341108,341214-341463,341546-341649,341728-343255, 343995-344056,344578-344728 Length = 879 Score = 27.1 bits (57), Expect = 5.3 Identities = 11/37 (29%), Positives = 22/37 (59%) Frame = +1 Query: 253 ESSSTINLTKEKFEVILDVQQFTPDEITVKASNNTVV 363 E + +NL E E+I+D +F DE+ + +N+ ++ Sbjct: 843 EDGTWMNLQLESEEIIVDTWEFILDELLEEVANDLLI 879 >04_04_1574 - 34536744-34537136,34541247-34541405,34541497-34542411, 34543642-34543731,34544324-34544390,34544483-34544676, 34544770-34545510,34545596-34545661,34545783-34545908, 34545978-34546073,34546153-34546521,34546602-34546724, 34546802-34546906,34547394-34547531,34547665-34547760, 34548018-34548275 Length = 1311 Score = 26.6 bits (56), Expect = 7.0 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +1 Query: 58 SIVPMMFRDWWDDWERIERPSRLLDQHFGMG 150 ++ P +R W D+E I R +L QH GMG Sbjct: 872 TLTPYRWR-WLRDYEFITRVDAVLRQHSGMG 901 >04_02_0007 + 8464923-8465155,8466037-8466591,8466645-8467662, 8467768-8468485,8468651-8468937 Length = 936 Score = 26.6 bits (56), Expect = 7.0 Identities = 13/25 (52%), Positives = 16/25 (64%) Frame = -2 Query: 121 WRGARCAPSHPTSRETSLVLSTSFL 47 WRG C+ S+P SR L LS+S L Sbjct: 125 WRGVTCSSSYP-SRVVHLELSSSHL 148 >03_02_0337 + 7594259-7594319,7594455-7595205,7596323-7596509 Length = 332 Score = 26.6 bits (56), Expect = 7.0 Identities = 12/18 (66%), Positives = 13/18 (72%) Frame = +3 Query: 99 GAHRAPLQTTGPALRHGS 152 GA APL TTG AL HG+ Sbjct: 44 GAGTAPLSTTGFALAHGA 61 >01_03_0278 - 14509481-14509506,14510700-14512291,14512547-14512638, 14513030-14514412 Length = 1030 Score = 26.6 bits (56), Expect = 7.0 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = +1 Query: 76 FRDWWDDWERIERPS 120 F+ WWD ER E+PS Sbjct: 652 FKGWWDKTERQEQPS 666 >10_06_0162 - 11348250-11349531,11349571-11349671 Length = 460 Score = 26.2 bits (55), Expect = 9.2 Identities = 12/29 (41%), Positives = 14/29 (48%) Frame = -2 Query: 175 RITGRPSSDPCRSAGPVVWRGARCAPSHP 89 R RP+ DP A PV+ R A HP Sbjct: 27 RFRRRPAVDPAAPAAPVLRRTAELLRGHP 55 >06_01_0295 - 2154069-2155483,2155561-2155708 Length = 520 Score = 26.2 bits (55), Expect = 9.2 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%) Frame = -2 Query: 139 SAGPVVWR-GARCAPSHPTSRETSLVLSTSFLFKVRCERALLXLVC 5 S GP+ W + P S S+ ++TSF+F V +A L ++C Sbjct: 410 SWGPLGWLVPSEVFPLEVRSAGQSVTVATSFVFTVFVAQAFLAMLC 455 >01_01_0419 - 3146851-3147339,3148428-3148663,3148847-3149793, 3150258-3150356,3151128-3151501 Length = 714 Score = 26.2 bits (55), Expect = 9.2 Identities = 17/51 (33%), Positives = 22/51 (43%) Frame = -2 Query: 163 RPSSDPCRSAGPVVWRGARCAPSHPTSRETSLVLSTSFLFKVRCERALLXL 11 R +D CR W G RC ++ R SL L+ FL + AL L Sbjct: 34 RAGTDCCR------WEGVRCGGANGDGRVRSLDLARCFLESAAIDPALFDL 78 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 9,576,872 Number of Sequences: 37544 Number of extensions: 175393 Number of successful extensions: 598 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 589 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 598 length of database: 14,793,348 effective HSP length: 74 effective length of database: 12,015,092 effective search space used: 660830060 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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