Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0975
         (735 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    32   0.021
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    25   2.4  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   3.2  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   3.2  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    25   3.2  
AY330179-1|AAQ16285.1|  171|Anopheles gambiae odorant-binding pr...    23   7.4  

>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 31.9 bits (69), Expect = 0.021
 Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +2

Query: 248 TEISLRRFADRAAGHPHGDPD-QQWTGPRKEHQRCRRRSQKKEQHHQ 385
           +E+  RR+  +A G P      QQ   P+++ Q+ +RR Q+++Q HQ
Sbjct: 239 SEVVRRRYRGKATGKPRSQQQPQQQQQPQQKQQQLQRR-QQQQQQHQ 284


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 13/46 (28%), Positives = 21/46 (45%)
 Frame = +3

Query: 138 YFSSWILLIGLFKGSTTTLDGIGLRPMPAERPKTLRKLKSVYDASP 275
           YF+  I  +G   GST  +D +G R    +   +L     ++ A P
Sbjct: 42  YFTPPIANVGYRDGSTREIDPLGARATSVDCRTSLAPCSKLFAAEP 87


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 9/32 (28%), Positives = 13/32 (40%)
 Frame = +2

Query: 290 HPHGDPDQQWTGPRKEHQRCRRRSQKKEQHHQ 385
           HP     Q    P  +HQ+   ++     HHQ
Sbjct: 259 HPSSHQQQSQQHPSSQHQQPTHQTHHHHHHHQ 290


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 9/32 (28%), Positives = 13/32 (40%)
 Frame = +2

Query: 290 HPHGDPDQQWTGPRKEHQRCRRRSQKKEQHHQ 385
           HP     Q    P  +HQ+   ++     HHQ
Sbjct: 259 HPSSHQQQSQQHPSSQHQQPTHQTHHHHHHHQ 290


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 9/32 (28%), Positives = 13/32 (40%)
 Frame = +2

Query: 290 HPHGDPDQQWTGPRKEHQRCRRRSQKKEQHHQ 385
           HP     Q    P  +HQ+   ++     HHQ
Sbjct: 211 HPSSHQQQSQQHPSSQHQQPTHQTHHHHHHHQ 242


>AY330179-1|AAQ16285.1|  171|Anopheles gambiae odorant-binding
           protein AgamOBP53 protein.
          Length = 171

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 15/36 (41%), Positives = 20/36 (55%)
 Frame = -3

Query: 652 PRKQCLVVVHPQSQTTRVRELEAIDGLRLDSEQLRP 545
           P  Q   VV+  +Q  ++ ELE IDG  L  E+L P
Sbjct: 57  PGFQAYFVVNCLAQC-QLEELEVIDGEELHLEKLYP 91


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,374
Number of Sequences: 2352
Number of extensions: 13897
Number of successful extensions: 45
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)