BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0975 (735 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 24 1.3 AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 22 5.2 DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 21 9.1 DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 21 9.1 DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 21 9.1 >AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice variant B protein. Length = 810 Score = 24.2 bits (50), Expect = 1.3 Identities = 9/17 (52%), Positives = 11/17 (64%) Frame = -1 Query: 498 PAPVCCQTTPLSRISSP 448 P P+ C TTP S I +P Sbjct: 655 PRPISCHTTPDSFIEAP 671 >AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. Length = 996 Score = 22.2 bits (45), Expect = 5.2 Identities = 10/28 (35%), Positives = 13/28 (46%) Frame = +3 Query: 231 PKTLRKLKSVYDASPTEPPVIHTATLTS 314 P TLRK+ +P P + LTS Sbjct: 899 PDTLRKIAQNRGTNPLAPDAVDLTQLTS 926 >DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex determiner protein. Length = 179 Score = 21.4 bits (43), Expect = 9.1 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%) Frame = -3 Query: 157 RIHEEK*IDDAIKSTLTNGYSLNHN--KKL 74 R EK + I S+L+N Y+ N+N KKL Sbjct: 70 RKEREKSKEHKIISSLSNNYNYNNNNYKKL 99 >DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex determiner protein. Length = 179 Score = 21.4 bits (43), Expect = 9.1 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%) Frame = -3 Query: 157 RIHEEK*IDDAIKSTLTNGYSLNHN--KKL 74 R EK + I S+L+N Y+ N+N KKL Sbjct: 70 RKEREKSKEHKIISSLSNNYNYNNNNYKKL 99 >DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex determiner protein. Length = 179 Score = 21.4 bits (43), Expect = 9.1 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 2/30 (6%) Frame = -3 Query: 157 RIHEEK*IDDAIKSTLTNGYSLNHN--KKL 74 R EK + I S+L+N Y+ N+N KKL Sbjct: 70 RKEREKSKEHKIISSLSNNYNYNNNNYKKL 99 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 177,408 Number of Sequences: 438 Number of extensions: 3527 Number of successful extensions: 8 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 22901220 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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