BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0974 (650 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z75554-11|CAA99961.1| 301|Caenorhabditis elegans Hypothetical p... 31 0.94 Z81475-8|CAL90887.1| 676|Caenorhabditis elegans Hypothetical pr... 29 2.9 Z81475-7|CAB03914.2| 653|Caenorhabditis elegans Hypothetical pr... 29 2.9 U53139-7|AAK18935.1| 235|Caenorhabditis elegans Hypothetical pr... 28 6.6 >Z75554-11|CAA99961.1| 301|Caenorhabditis elegans Hypothetical protein ZC455.8a protein. Length = 301 Score = 30.7 bits (66), Expect = 0.94 Identities = 14/43 (32%), Positives = 24/43 (55%) Frame = +1 Query: 292 FIAVLAINIASFACQRIPVKYHGLKLELNYFKWFIYLTNWGFM 420 F+ L I+I +PVK+H + +++ F +FI L WG + Sbjct: 101 FLGAL-ISIERLIAVFLPVKFHNNRQKISIFTFFIMLVLWGML 142 >Z81475-8|CAL90887.1| 676|Caenorhabditis elegans Hypothetical protein C24H11.8b protein. Length = 676 Score = 29.1 bits (62), Expect = 2.9 Identities = 10/35 (28%), Positives = 18/35 (51%) Frame = -1 Query: 323 LAMLMANTAINTIHLYRI*YLEGCCLFCHWQQPXR 219 + + +AN A ++ Y + CC +C WQ+ R Sbjct: 164 MLLCLANIAETLAQVFTYIYFKLCCAYCRWQKNRR 198 >Z81475-7|CAB03914.2| 653|Caenorhabditis elegans Hypothetical protein C24H11.8a protein. Length = 653 Score = 29.1 bits (62), Expect = 2.9 Identities = 10/35 (28%), Positives = 18/35 (51%) Frame = -1 Query: 323 LAMLMANTAINTIHLYRI*YLEGCCLFCHWQQPXR 219 + + +AN A ++ Y + CC +C WQ+ R Sbjct: 164 MLLCLANIAETLAQVFTYIYFKLCCAYCRWQKNRR 198 >U53139-7|AAK18935.1| 235|Caenorhabditis elegans Hypothetical protein F18E3.10 protein. Length = 235 Score = 27.9 bits (59), Expect = 6.6 Identities = 10/26 (38%), Positives = 16/26 (61%) Frame = -1 Query: 284 HLYRI*YLEGCCLFCHWQQPXR*EGQ 207 +L I +L+GC +F W P + EG+ Sbjct: 118 YLTNIVFLQGCMIFIFWHMPTQKEGR 143 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,268,622 Number of Sequences: 27780 Number of extensions: 276762 Number of successful extensions: 708 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 676 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 708 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1444744186 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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