Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0974
         (650 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75554-11|CAA99961.1|  301|Caenorhabditis elegans Hypothetical p...    31   0.94 
Z81475-8|CAL90887.1|  676|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z81475-7|CAB03914.2|  653|Caenorhabditis elegans Hypothetical pr...    29   2.9  
U53139-7|AAK18935.1|  235|Caenorhabditis elegans Hypothetical pr...    28   6.6  

>Z75554-11|CAA99961.1|  301|Caenorhabditis elegans Hypothetical
           protein ZC455.8a protein.
          Length = 301

 Score = 30.7 bits (66), Expect = 0.94
 Identities = 14/43 (32%), Positives = 24/43 (55%)
 Frame = +1

Query: 292 FIAVLAINIASFACQRIPVKYHGLKLELNYFKWFIYLTNWGFM 420
           F+  L I+I       +PVK+H  + +++ F +FI L  WG +
Sbjct: 101 FLGAL-ISIERLIAVFLPVKFHNNRQKISIFTFFIMLVLWGML 142


>Z81475-8|CAL90887.1|  676|Caenorhabditis elegans Hypothetical
           protein C24H11.8b protein.
          Length = 676

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -1

Query: 323 LAMLMANTAINTIHLYRI*YLEGCCLFCHWQQPXR 219
           + + +AN A     ++   Y + CC +C WQ+  R
Sbjct: 164 MLLCLANIAETLAQVFTYIYFKLCCAYCRWQKNRR 198


>Z81475-7|CAB03914.2|  653|Caenorhabditis elegans Hypothetical
           protein C24H11.8a protein.
          Length = 653

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -1

Query: 323 LAMLMANTAINTIHLYRI*YLEGCCLFCHWQQPXR 219
           + + +AN A     ++   Y + CC +C WQ+  R
Sbjct: 164 MLLCLANIAETLAQVFTYIYFKLCCAYCRWQKNRR 198


>U53139-7|AAK18935.1|  235|Caenorhabditis elegans Hypothetical
           protein F18E3.10 protein.
          Length = 235

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 284 HLYRI*YLEGCCLFCHWQQPXR*EGQ 207
           +L  I +L+GC +F  W  P + EG+
Sbjct: 118 YLTNIVFLQGCMIFIFWHMPTQKEGR 143


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,268,622
Number of Sequences: 27780
Number of extensions: 276762
Number of successful extensions: 708
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 708
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)