Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0970
         (642 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    27   0.12 
AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.           27   0.12 
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           27   0.12 
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.3  
AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.              21   7.7  

>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
 Frame = -3

Query: 376 NSLVAGWQVFSFLPCPPQSIFQ--GCLLNSP--SLLFSIINFIRYY 251
           NSL    QV +F+ CP +++ +   CL   P  +++ ++ NF+R+Y
Sbjct: 247 NSLEKAKQVGAFMGCPTRNVKEMIRCLRYRPARAIVETLANFMRFY 292


>AY526235-1|AAS20468.1|  169|Apis mellifera esterase protein.
          Length = 169

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
 Frame = -3

Query: 376 NSLVAGWQVFSFLPCPPQSIFQ--GCLLNSP--SLLFSIINFIRYY 251
           NSL    QV +F+ CP +++ +   CL   P  +++ ++ NF+R+Y
Sbjct: 118 NSLEKAKQVGAFMGCPTRNVKEMIRCLRYRPARAIVETLANFMRFY 163


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 27.5 bits (58), Expect = 0.12
 Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 4/46 (8%)
 Frame = -3

Query: 376 NSLVAGWQVFSFLPCPPQSIFQ--GCLLNSP--SLLFSIINFIRYY 251
           NSL    QV +F+ CP +++ +   CL   P  +++ ++ NF+R+Y
Sbjct: 247 NSLEKAKQVGAFMGCPTRNVKEMIRCLRYRPARAIVETLANFMRFY 292


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = +1

Query: 436  KPKEMEADGTKSHEELSGTRPSAMKY 513
            KP+  EA+  K      GTRP   KY
Sbjct: 1015 KPQSQEANKPKPATGGKGTRPKRGKY 1040


>AB231585-1|BAE17127.1|  898|Apis mellifera Mahya protein.
          Length = 898

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +3

Query: 276 LNNNEGLFSRQP*KIDCGGQGRK 344
           L N+E L   QP K D  G G K
Sbjct: 436 LKNDEALNHDQPDKYDLIGNGTK 458


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,188
Number of Sequences: 438
Number of extensions: 3268
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19315974
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)