Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0967
(750 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY769607-1|AAV40983.1| 196|Tribolium castaneum heat shock cogna... 31 0.010
AY769606-1|AAV40982.1| 196|Tribolium castaneum heat shock prote... 31 0.010
AY769608-1|AAV40984.1| 195|Tribolium castaneum heat shock prote... 27 0.12
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 24 1.5
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 24 1.5
EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock prote... 23 2.6
DQ659253-1|ABG47451.1| 439|Tribolium castaneum imaginal disc gr... 23 3.4
AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger tran... 23 3.4
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 22 4.6
AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless prot... 22 4.6
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 22 4.6
AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription fa... 22 6.0
>AY769607-1|AAV40983.1| 196|Tribolium castaneum heat shock cognate
70 protein.
Length = 196
Score = 31.1 bits (67), Expect = 0.010
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1
Query: 643 ERNVLIFDLGGGPF 684
ERNVLIFDLGGG F
Sbjct: 20 ERNVLIFDLGGGTF 33
Score = 27.1 bits (57), Expect = 0.16
Identities = 19/48 (39%), Positives = 24/48 (50%)
Frame = +3
Query: 606 AIAYGLDKKGTGRTKCTYL*PRRRSFWTCPXLHRRMVSFEVKSTAGDT 749
AIAYGLDKK + + + + L FEVK+TAGDT
Sbjct: 8 AIAYGLDKKAE-KERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDT 54
>AY769606-1|AAV40982.1| 196|Tribolium castaneum heat shock protein
70 protein.
Length = 196
Score = 31.1 bits (67), Expect = 0.010
Identities = 13/14 (92%), Positives = 13/14 (92%)
Frame = +1
Query: 643 ERNVLIFDLGGGPF 684
ERNVLIFDLGGG F
Sbjct: 20 ERNVLIFDLGGGTF 33
Score = 28.3 bits (60), Expect = 0.069
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = +3
Query: 606 AIAYGLDKKGTGRTKCTYL*PRRRSFWTCPXLHRRMVSFEVKSTAGDT 749
AIAYGLDKK R + + + L FEVK+TAGDT
Sbjct: 8 AIAYGLDKKAE-RERNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDT 54
>AY769608-1|AAV40984.1| 195|Tribolium castaneum heat shock protein
70 protein.
Length = 195
Score = 27.5 bits (58), Expect = 0.12
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +1
Query: 643 ERNVLIFDLGGGPF 684
E+N+L++DLGGG F
Sbjct: 19 EQNILVYDLGGGTF 32
Score = 26.2 bits (55), Expect = 0.28
Identities = 19/48 (39%), Positives = 23/48 (47%)
Frame = +3
Query: 606 AIAYGLDKKGTGRTKCTYL*PRRRSFWTCPXLHRRMVSFEVKSTAGDT 749
AIAYGLDKKG + Y + L FEV +T+GDT
Sbjct: 8 AIAYGLDKKGAEQNILVY--DLGGGTFDVSILTIDNGVFEVVATSGDT 53
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 23.8 bits (49), Expect = 1.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 116 RWCLPARXRWRSSPTTRATGPLRLMLRSQ 202
+WC P R R + + GP RL RS+
Sbjct: 585 QWCKPCRPREQLTWRRNFHGPHRLAARSR 613
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 23.8 bits (49), Expect = 1.5
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 116 RWCLPARXRWRSSPTTRATGPLRLMLRSQ 202
+WC P R R + + GP RL RS+
Sbjct: 477 QWCKPCRPREQLTWRRNFHGPHRLAARSR 505
>EF633444-1|ABR32189.1| 721|Tribolium castaneum heat shock protein
90 protein.
Length = 721
Score = 23.0 bits (47), Expect = 2.6
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 356 DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKT 481
D KPKI+ + ED+ E+ K K T + L KT
Sbjct: 241 DKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKT 282
>DQ659253-1|ABG47451.1| 439|Tribolium castaneum imaginal disc
growth factor 2 protein.
Length = 439
Score = 22.6 bits (46), Expect = 3.4
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 539 TKDAGTISGLNVLRIINEPTAA 604
TKDAG +S + ++N+P A
Sbjct: 330 TKDAGLLSYPEICTLLNDPQNA 351
>AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger
transcription factor protein.
Length = 228
Score = 22.6 bits (46), Expect = 3.4
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 7/49 (14%)
Frame = +1
Query: 427 FH-GAYENEGNCRSL---SWQNCA---ECSYHGSRVLQ*LSKTSHKRCR 552
FH GA+ EG C+S ++ N + EC +G V+ ++T+ K CR
Sbjct: 15 FHFGAFTCEG-CKSFFGRTYNNISSISECKNNGECVINKKNRTACKACR 62
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 22.2 bits (45), Expect = 4.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -2
Query: 719 RYHPPM*XWTRPKGPPPRSKISTF 648
RY PP TRP P P++ I+++
Sbjct: 23 RYLPPSLSDTRPMLPYPQNYINSY 46
>AF225975-2|AAF74116.1| 302|Tribolium castaneum Tc-tailless
protein.
Length = 302
Score = 22.2 bits (45), Expect = 4.6
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = +2
Query: 638 WENEMYLSLTSAAVLLDVSXLTSEDGIFRGEIHRR 742
W + L L+D S L G+ + E HRR
Sbjct: 236 WLDLFVLGAAQFLPLMDFSVLVEACGVLQQEPHRR 270
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 22.2 bits (45), Expect = 4.6
Identities = 11/35 (31%), Positives = 15/35 (42%)
Frame = +2
Query: 638 WENEMYLSLTSAAVLLDVSXLTSEDGIFRGEIHRR 742
W + L L+D S L G+ + E HRR
Sbjct: 236 WLDLFVLGAAQFLPLMDFSVLVEACGVLQQEPHRR 270
>AJ415419-1|CAC94468.1| 441|Tribolium castaneum transcription
factor protein.
Length = 441
Score = 21.8 bits (44), Expect = 6.0
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -2
Query: 710 PPM*XWTRPKGPPPRSKISTFRSPS 636
P + W+ PPP +IS +PS
Sbjct: 319 PTINCWSLTSSPPPPYQISAQPTPS 343
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,304
Number of Sequences: 336
Number of extensions: 3902
Number of successful extensions: 23
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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