Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0967
(750 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 238 4e-63
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 232 3e-61
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 202 3e-52
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 173 1e-43
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 110 1e-24
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 103 2e-22
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 90 2e-18
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 6e-10
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 31 1.00
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 30 2.3
SB_6746| Best HMM Match : rve (HMM E-Value=2.4) 29 3.0
SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 29 4.0
SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 29 4.0
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_57054| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_15995| Best HMM Match : DUF1388 (HMM E-Value=3.9e-12) 28 9.3
SB_11849| Best HMM Match : DUF1388 (HMM E-Value=3.9e-12) 28 9.3
SB_33282| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_14214| Best HMM Match : AmoC (HMM E-Value=3.2) 28 9.3
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 238 bits (582), Expect = 4e-63
Identities = 120/173 (69%), Positives = 135/173 (78%), Gaps = 1/173 (0%)
Frame = +2
Query: 206 TERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVA 385
TERLIGDAAKNQVAMNP NT+FDAKRLIGRKF+D V DM HWPF V+ +G +PKI+V
Sbjct: 47 TERLIGDAAKNQVAMNPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVE 106
Query: 386 YKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISG 565
+KGE K+FFPEE+SSMVLTKMKETAEAYLG V +AV+TVPAYF+DSQRQATKDAGTI+G
Sbjct: 107 FKGEKKSFFPEEISSMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAG 166
Query: 566 LNVLRIINEPTAACDCLRS*QK-GYWENEMYLSLTSAAVLLDVSXLTSEDGIF 721
LNVLRIINEPTAA +K G N + L DVS LT EDGIF
Sbjct: 167 LNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGGT--FDVSVLTIEDGIF 217
Score = 48.0 bits (109), Expect = 8e-06
Identities = 21/22 (95%), Positives = 22/22 (100%)
Frame = +1
Query: 136 GKVEIIANDQGNRTTPSYVAFT 201
GKVEIIANDQGNRTTPSYVAF+
Sbjct: 24 GKVEIIANDQGNRTTPSYVAFS 45
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +3
Query: 72 KHPQ*XIDLGTTYSCVGVFQHG 137
K P IDLGTTYSCVGVFQHG
Sbjct: 3 KTPAVGIDLGTTYSCVGVFQHG 24
Score = 29.1 bits (62), Expect = 4.0
Identities = 23/49 (46%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 606 AIAYGLDKK-GTGRTKCTYL*PRRRSFWTCPXLHRRMVSFEVKSTAGDT 749
AIAYGLDKK G R Y + L FEVKSTAGDT
Sbjct: 180 AIAYGLDKKVGVERNVLIY--DLGGGTFDVSVLTIEDGIFEVKSTAGDT 226
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 232 bits (567), Expect = 3e-61
Identities = 116/170 (68%), Positives = 133/170 (78%)
Frame = +2
Query: 206 TERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVA 385
TERL+GDAAKNQVA+NP NTIFDAKRLIGR+++DATVQ+DMK WPF+++SD KPKI+V
Sbjct: 47 TERLVGDAAKNQVALNPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVE 106
Query: 386 YKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISG 565
YKGE KTF EE+SSMVL KMKETAEAYLG+ V +AVITVPAYFNDSQRQATKDAGTI+G
Sbjct: 107 YKGERKTFAAEEISSMVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIAG 166
Query: 566 LNVLRIINEPTAACDCLRS*QKGYWENEMYLSLTSAAVLLDVSXLTSEDG 715
LNVLR+INEPTAA K + L DVS LT +DG
Sbjct: 167 LNVLRVINEPTAAA-LAYGLDKSLSGEKNVLIFDLGGGTFDVSILTIDDG 215
Score = 48.0 bits (109), Expect = 8e-06
Identities = 21/22 (95%), Positives = 21/22 (95%)
Frame = +1
Query: 136 GKVEIIANDQGNRTTPSYVAFT 201
GKVEIIANDQGNRTTPSYV FT
Sbjct: 24 GKVEIIANDQGNRTTPSYVGFT 45
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/22 (77%), Positives = 18/22 (81%)
Frame = +3
Query: 72 KHPQ*XIDLGTTYSCVGVFQHG 137
K P IDLGTTYSCVGVFQ+G
Sbjct: 3 KAPAIGIDLGTTYSCVGVFQNG 24
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 202 bits (492), Expect = 3e-52
Identities = 102/171 (59%), Positives = 125/171 (73%)
Frame = +2
Query: 209 ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAY 388
ERLIGD AKNQ+ NP NT+FDAKRLIGR ++D +VQ D+K +PF+VV KP ++V
Sbjct: 746 ERLIGDGAKNQLTTNPENTVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKV 805
Query: 389 KGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGL 568
K E KTF EE+S+MVLTKMKETAEAYLGK V +AV+TVPAYFND+QRQATKDAG I+GL
Sbjct: 806 KDEIKTFAAEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGL 865
Query: 569 NVLRIINEPTAACDCLRS*QKGYWENEMYLSLTSAAVLLDVSXLTSEDGIF 721
V+RIINEPTAA +K +N + L DVS LT ++G+F
Sbjct: 866 TVMRIINEPTAAAIAYGMDKKEGEKNILVFDLGGGT--FDVSLLTIDNGVF 914
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/22 (90%), Positives = 21/22 (95%)
Frame = +1
Query: 136 GKVEIIANDQGNRTTPSYVAFT 201
G+VEIIANDQGNR TPSYVAFT
Sbjct: 721 GRVEIIANDQGNRITPSYVAFT 742
Score = 35.5 bits (78), Expect = 0.046
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +3
Query: 90 IDLGTTYSCVGVFQHG 137
IDLGTTYSCVGVF++G
Sbjct: 706 IDLGTTYSCVGVFKNG 721
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 173 bits (421), Expect = 1e-43
Identities = 92/140 (65%), Positives = 102/140 (72%), Gaps = 25/140 (17%)
Frame = +2
Query: 209 ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAY 388
ERL+GDAAKNQVAMNP NTIFDAKRLIGR+F+D V+ DMKHW FEVV++ G+PK+KV Y
Sbjct: 48 ERLVGDAAKNQVAMNPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEY 107
Query: 389 KGEDKTFFPEEV-------------------------SSMVLTKMKETAEAYLGKTVQNA 493
KGE KTFF EEV SSMVL KMKETAEAYLG V +A
Sbjct: 108 KGETKTFFAEEVVNEAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDA 167
Query: 494 VITVPAYFNDSQRQATKDAG 553
V+TVPAYFNDSQRQATKDAG
Sbjct: 168 VVTVPAYFNDSQRQATKDAG 187
Score = 118 bits (284), Expect = 5e-27
Identities = 66/102 (64%), Positives = 73/102 (71%), Gaps = 1/102 (0%)
Frame = +2
Query: 419 EVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPT 598
++SSMVL KMKETAEAYLG V +AV+TVPAYFNDSQRQATKDAG ISGLNVLRIINEPT
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIINEPT 270
Query: 599 AACDCLRS*QK-GYWENEMYLSLTSAAVLLDVSXLTSEDGIF 721
AA +K G N + L DVS L+ EDGIF
Sbjct: 271 AAAIAYGLDKKVGQERNVLIFDLGGGT--FDVSVLSIEDGIF 310
Score = 49.6 bits (113), Expect = 3e-06
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +1
Query: 136 GKVEIIANDQGNRTTPSYVAFT 201
GKVEIIANDQGNRTTPSYVAFT
Sbjct: 24 GKVEIIANDQGNRTTPSYVAFT 45
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/22 (81%), Positives = 18/22 (81%)
Frame = +3
Query: 72 KHPQ*XIDLGTTYSCVGVFQHG 137
K P IDLGTTYSCVGVFQHG
Sbjct: 3 KAPAIGIDLGTTYSCVGVFQHG 24
Score = 28.3 bits (60), Expect = 7.0
Identities = 20/48 (41%), Positives = 24/48 (50%)
Frame = +3
Query: 606 AIAYGLDKKGTGRTKCTYL*PRRRSFWTCPXLHRRMVSFEVKSTAGDT 749
AIAYGLDKK G+ + + + L FEVKST GDT
Sbjct: 273 AIAYGLDKK-VGQERNVLIFDLGGGTFDVSVLSIEDGIFEVKSTHGDT 319
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 110 bits (264), Expect = 1e-24
Identities = 67/170 (39%), Positives = 92/170 (54%), Gaps = 1/170 (0%)
Frame = +2
Query: 215 LIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDG-GKPKIKVAYK 391
L+G+ A +Q +NP NTI+DAKR IG+ F + K + F V +D G V K
Sbjct: 79 LVGEKALSQAEINPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKK 138
Query: 392 GEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLN 571
G PEE+ V+ K++ AE L TV AV++VPA F+ QR AT A +++G+
Sbjct: 139 GNFTVITPEEIGGYVIKKLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVKAASLAGIT 198
Query: 572 VLRIINEPTAACDCLRS*QKGYWENEMYLSLTSAAVLLDVSXLTSEDGIF 721
VLR+INEPTAA +K N M + L LDVS L + G+F
Sbjct: 199 VLRVINEPTAAALAYGLHKKEGVANVMVVDLGGGT--LDVSLLNIQGGMF 246
Score = 31.5 bits (68), Expect = 0.76
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = +3
Query: 90 IDLGTTYSCVGVFQ 131
IDLGTTYSCVG +Q
Sbjct: 36 IDLGTTYSCVGAYQ 49
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 103 bits (246), Expect = 2e-22
Identities = 52/118 (44%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Frame = +2
Query: 251 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVS 427
N NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVM 177
Query: 428 SMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTA 601
+M+ T++K TAE L V + VI+VP+Y+ D QR+ DA +GLN LR++N+ TA
Sbjct: 178 AMLFTRLKTTAEIALKTKVTDCVISVPSYYTDRQRRCMLDASATAGLNCLRLMNDTTA 235
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 90.2 bits (214), Expect = 2e-18
Identities = 42/68 (61%), Positives = 57/68 (83%)
Frame = +2
Query: 374 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAG 553
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AVITVPA+FND+QRQATKDAG
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAG 61
Query: 554 TISGLNVL 577
TI+GL+VL
Sbjct: 62 TIAGLDVL 69
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 61.7 bits (143), Expect = 6e-10
Identities = 30/78 (38%), Positives = 47/78 (60%)
Frame = +2
Query: 368 PKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKD 547
P +K Y+ D TF PEE+ M+L + E + +++ V+TVP +FN ++R+A
Sbjct: 68 PHVK-NYQQSDVTFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRALLR 126
Query: 548 AGTISGLNVLRIINEPTA 601
A + GLNVL+I+N TA
Sbjct: 127 AAELVGLNVLQIMNSNTA 144
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 31.1 bits (67), Expect = 1.00
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 136 GKVEIIANDQGNRTTPSYVAFT 201
G IIAND G+R TP+ VAF+
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFS 104
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 145 EIIANDQGNRTTPSYVAFT 201
++I N +G+RTTPS VAFT
Sbjct: 7 KVIENAEGSRTTPSVVAFT 25
>SB_6746| Best HMM Match : rve (HMM E-Value=2.4)
Length = 488
Score = 29.5 bits (63), Expect = 3.0
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Frame = +2
Query: 131 ARXRWRSSPTTRA---TGPLRLMLRSQXTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKF 301
A+ + +PT +A TG R T + + AKNQ+ NP N + + L F
Sbjct: 393 AKNQTGQNPTNQAENQTGQNRTNQAKNQTGQNPTNQAKNQIGQNPTNHAKNQRYLKSIVF 452
Query: 302 EDATVQAD 325
ED+ ++ D
Sbjct: 453 EDSLIRND 460
>SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)
Length = 420
Score = 29.1 bits (62), Expect = 4.0
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 272 RILCCWGSSPPGSWRH 225
R++CC G SP WRH
Sbjct: 395 RVVCCQGDSPSPRWRH 410
>SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)
Length = 340
Score = 29.1 bits (62), Expect = 4.0
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 272 RILCCWGSSPPGSWRH 225
R++CC G SP WRH
Sbjct: 170 RVVCCQGDSPSPRWRH 185
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -1
Query: 462 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRPMR 283
S F+F ST + +S +KV+ SPL + + P+ G S C V NL
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV--QNLSRCP 1165
Query: 282 RLASNIVL 259
++++ VL
Sbjct: 1166 KISNATVL 1173
>SB_57054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 955
Score = 28.3 bits (60), Expect = 7.0
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = -1
Query: 243 TWFLAASPMRRSVXCERNIRRSGPVALVVGDDLHLXRAGRHQRKSTWYPDR 91
TW L + + CE+++ + VA VV DL + KS W+P +
Sbjct: 376 TWILDVINIDDGIFCEKDLATAERVAEVVRADLIRADIVPNFEKSVWHPSQ 426
>SB_15995| Best HMM Match : DUF1388 (HMM E-Value=3.9e-12)
Length = 1108
Score = 27.9 bits (59), Expect = 9.3
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = -1
Query: 729 SPRKIPSSDVXMDTSKRTAAEVKDKYISFSQ---YPFCQDRKQSQAAVGSLMIRRTFKPE 559
+P K +DV ++ T AE +DK + Q Q R SQAA +L R +F +
Sbjct: 1041 APEKAEGTDVKTQATEHTVAEGEDKSLPMEQGGGKNSNQTRSSSQAASRNLQRRVSFSSD 1100
>SB_11849| Best HMM Match : DUF1388 (HMM E-Value=3.9e-12)
Length = 359
Score = 27.9 bits (59), Expect = 9.3
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Frame = -1
Query: 729 SPRKIPSSDVXMDTSKRTAAEVKDKYISFSQ---YPFCQDRKQSQAAVGSLMIRRTFKPE 559
+P K +DV ++ T AE +DK + Q Q R SQAA +L R +F +
Sbjct: 292 APEKAEGTDVKTQATEHTVAEGEDKSLPMEQGGGKNSNQTRSSSQAASRNLQRRVSFSSD 351
>SB_33282| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 92
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 207 VXCERNIRRSGPVALVVGDDLHLXRAGRHQRKSTWYPDR 91
+ CE+++ + VA VV DL R+ KS W+P +
Sbjct: 4 IFCEKDLATAERVAEVVRADLIRAGIVRNSEKSVWHPSQ 42
>SB_14214| Best HMM Match : AmoC (HMM E-Value=3.2)
Length = 451
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = -1
Query: 336 QCFMSACTVASSNLRPMRRLASNIVLLGFIATWFLAASPMRRSVXCERNIR 184
QCF+S C + S + + R+ L TW + + M S + IR
Sbjct: 169 QCFLSVCDLCCSLMTQIPRMRHTWDFLEHAPTWISSQTSMSFSAITDATIR 219
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,993,177
Number of Sequences: 59808
Number of extensions: 545957
Number of successful extensions: 1355
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1340
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -