BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0967 (750 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 246 1e-65 M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 239 1e-63 U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 215 4e-56 M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 215 4e-56 Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 210 6e-55 Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 210 6e-55 AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 207 7e-54 Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 204 5e-53 U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 157 1e-38 X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 153 1e-37 Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 121 5e-28 Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 121 5e-28 Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 108 5e-24 L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 99 4e-21 Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 70 2e-12 Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 70 2e-12 U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 62 3e-10 Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical pr... 30 1.5 Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical p... 30 1.5 AF016428-3|AAO26000.3| 445|Caenorhabditis elegans Ground-like (... 29 4.7 Z81136-5|CAB03460.2| 733|Caenorhabditis elegans Hypothetical pr... 28 6.2 U61947-14|ABA29341.1| 413|Caenorhabditis elegans Nuclear hormon... 28 8.1 >Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical protein F26D10.3 protein. Length = 640 Score = 246 bits (602), Expect = 1e-65 Identities = 122/173 (70%), Positives = 141/173 (81%), Gaps = 1/173 (0%) Frame = +2 Query: 206 TERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKV 382 TERLIGDAAKNQVAMNP+NT+FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G KPK++V Sbjct: 47 TERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQV 106 Query: 383 AYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTIS 562 YKGE+K F PEE+SSMVL KMKETAEA+LG TV++AV+TVPAYFNDSQRQATKDAG I+ Sbjct: 107 EYKGENKIFTPEEISSMVLLKMKETAEAFLGTTVKDAVVTVPAYFNDSQRQATKDAGAIA 166 Query: 563 GLNVLRIINEPTAACDCLRS*QKGYWENEMYLSLTSAAVLLDVSXLTSEDGIF 721 GLNVLRIINEPTAA +KG+ E + L DVS LT EDGIF Sbjct: 167 GLNVLRIINEPTAAAIAYGLDKKGHGERNV-LIFDLGGGTFDVSILTIEDGIF 218 Score = 49.6 bits (113), Expect = 2e-06 Identities = 22/22 (100%), Positives = 22/22 (100%) Frame = +1 Query: 136 GKVEIIANDQGNRTTPSYVAFT 201 GKVEIIANDQGNRTTPSYVAFT Sbjct: 24 GKVEIIANDQGNRTTPSYVAFT 45 Score = 39.9 bits (89), Expect = 0.002 Identities = 17/22 (77%), Positives = 17/22 (77%) Frame = +3 Query: 72 KHPQ*XIDLGTTYSCVGVFQHG 137 KH IDLGTTYSCVGVF HG Sbjct: 3 KHNAVGIDLGTTYSCVGVFMHG 24 Score = 32.7 bits (71), Expect = 0.29 Identities = 23/48 (47%), Positives = 24/48 (50%) Frame = +3 Query: 606 AIAYGLDKKGTGRTKCTYL*PRRRSFWTCPXLHRRMVSFEVKSTAGDT 749 AIAYGLDKKG G +F L FEVKSTAGDT Sbjct: 181 AIAYGLDKKGHGERNVLIFDLGGGTF-DVSILTIEDGIFEVKSTAGDT 227 >M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.elegans heat shockprotein 70A gene, complete cds. ). Length = 640 Score = 239 bits (586), Expect = 1e-63 Identities = 119/173 (68%), Positives = 139/173 (80%), Gaps = 1/173 (0%) Frame = +2 Query: 206 TERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKV 382 TERLIGDAAKNQVAMNP+NT+FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G KPK++V Sbjct: 47 TERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQV 106 Query: 383 AYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTIS 562 YKGE+K F PEE+SSMVL KMK+TAEA+L TV++AV+TVP YFNDSQRQATKDAG I+ Sbjct: 107 EYKGENKIFTPEEISSMVLLKMKKTAEAFLEPTVKDAVVTVPTYFNDSQRQATKDAGAIA 166 Query: 563 GLNVLRIINEPTAACDCLRS*QKGYWENEMYLSLTSAAVLLDVSXLTSEDGIF 721 GLNVLRIINEPTAA +KG+ E + L DVS LT EDGIF Sbjct: 167 GLNVLRIINEPTAAAIAYGLDKKGHGERNV-LIFDLGGGTFDVSILTIEDGIF 218 Score = 49.6 bits (113), Expect = 2e-06 Identities = 22/22 (100%), Positives = 22/22 (100%) Frame = +1 Query: 136 GKVEIIANDQGNRTTPSYVAFT 201 GKVEIIANDQGNRTTPSYVAFT Sbjct: 24 GKVEIIANDQGNRTTPSYVAFT 45 Score = 39.9 bits (89), Expect = 0.002 Identities = 17/22 (77%), Positives = 17/22 (77%) Frame = +3 Query: 72 KHPQ*XIDLGTTYSCVGVFQHG 137 KH IDLGTTYSCVGVF HG Sbjct: 3 KHNAVGIDLGTTYSCVGVFMHG 24 Score = 32.7 bits (71), Expect = 0.29 Identities = 23/48 (47%), Positives = 24/48 (50%) Frame = +3 Query: 606 AIAYGLDKKGTGRTKCTYL*PRRRSFWTCPXLHRRMVSFEVKSTAGDT 749 AIAYGLDKKG G +F L FEVKSTAGDT Sbjct: 181 AIAYGLDKKGHGERNVLIFDLGGGTF-DVSILTIEDGIFEVKSTAGDT 227 >U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein protein 3 protein. Length = 661 Score = 215 bits (524), Expect = 4e-56 Identities = 105/171 (61%), Positives = 128/171 (74%) Frame = +2 Query: 209 ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAY 388 +RLIGDAAKNQ+ +NP NTIFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V Sbjct: 79 DRLIGDAAKNQLTINPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKV 138 Query: 389 KGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGL 568 ++K F PEEVS+MVL KMKE AE+YLGK V+NAV+TVPAYFND+QRQATKDAGTI+GL Sbjct: 139 GSDNKQFTPEEVSAMVLVKMKEIAESYLGKEVKNAVVTVPAYFNDAQRQATKDAGTIAGL 198 Query: 569 NVLRIINEPTAACDCLRS*QKGYWENEMYLSLTSAAVLLDVSXLTSEDGIF 721 NV+RIINEPTAA +K N + L DVS LT ++G+F Sbjct: 199 NVVRIINEPTAAAIAYGLDKKDGERNILVFDLGGGT--FDVSMLTIDNGVF 247 Score = 44.4 bits (100), Expect = 9e-05 Identities = 19/22 (86%), Positives = 21/22 (95%) Frame = +1 Query: 136 GKVEIIANDQGNRTTPSYVAFT 201 G+VEIIANDQGNR TPSYVAF+ Sbjct: 53 GRVEIIANDQGNRITPSYVAFS 74 Score = 34.3 bits (75), Expect = 0.094 Identities = 13/16 (81%), Positives = 16/16 (100%) Frame = +3 Query: 90 IDLGTTYSCVGVFQHG 137 IDLGTTYSCVGV+++G Sbjct: 38 IDLGTTYSCVGVYKNG 53 >M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. elegans BiP (hsp3)gene, complete cds. ). Length = 661 Score = 215 bits (524), Expect = 4e-56 Identities = 105/171 (61%), Positives = 128/171 (74%) Frame = +2 Query: 209 ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAY 388 +RLIGDAAKNQ+ +NP NTIFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V Sbjct: 79 DRLIGDAAKNQLTINPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKV 138 Query: 389 KGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGL 568 ++K F PEEVS+MVL KMKE AE+YLGK V+NAV+TVPAYFND+QRQATKDAGTI+GL Sbjct: 139 GSDNKQFTPEEVSAMVLVKMKEIAESYLGKEVKNAVVTVPAYFNDAQRQATKDAGTIAGL 198 Query: 569 NVLRIINEPTAACDCLRS*QKGYWENEMYLSLTSAAVLLDVSXLTSEDGIF 721 NV+RIINEPTAA +K N + L DVS LT ++G+F Sbjct: 199 NVVRIINEPTAAAIAYGLDKKDGERNILVFDLGGGT--FDVSMLTIDNGVF 247 Score = 44.4 bits (100), Expect = 9e-05 Identities = 19/22 (86%), Positives = 21/22 (95%) Frame = +1 Query: 136 GKVEIIANDQGNRTTPSYVAFT 201 G+VEIIANDQGNR TPSYVAF+ Sbjct: 53 GRVEIIANDQGNRITPSYVAFS 74 Score = 34.3 bits (75), Expect = 0.094 Identities = 13/16 (81%), Positives = 16/16 (100%) Frame = +3 Query: 90 IDLGTTYSCVGVFQHG 137 IDLGTTYSCVGV+++G Sbjct: 38 IDLGTTYSCVGVYKNG 53 >Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical protein F44E5.5 protein. Length = 645 Score = 210 bits (514), Expect = 6e-55 Identities = 105/170 (61%), Positives = 125/170 (73%) Frame = +2 Query: 206 TERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVA 385 TERL+GDAAK+Q A NP NT+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V Sbjct: 47 TERLVGDAAKDQAARNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVE 106 Query: 386 YKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISG 565 KGE + F PEE+S+MVL KMKETAE YLG TV++AVITVPAYFNDSQRQATKDA TI+G Sbjct: 107 VKGEKRQFNPEEISAMVLQKMKETAETYLGHTVKDAVITVPAYFNDSQRQATKDAATIAG 166 Query: 566 LNVLRIINEPTAACDCLRS*QKGYWENEMYLSLTSAAVLLDVSXLTSEDG 715 LN +RIINEPTAA KG + + L DVS L+ +G Sbjct: 167 LNAIRIINEPTAAA-LAYGLDKGIQDEKNVLIFDLGGGTFDVSILSIAEG 215 Score = 44.0 bits (99), Expect = 1e-04 Identities = 18/22 (81%), Positives = 21/22 (95%) Frame = +1 Query: 136 GKVEIIANDQGNRTTPSYVAFT 201 GKVEI+AN +GN+TTPSYVAFT Sbjct: 24 GKVEILANSEGNKTTPSYVAFT 45 Score = 35.5 bits (78), Expect = 0.041 Identities = 13/16 (81%), Positives = 16/16 (100%) Frame = +3 Query: 90 IDLGTTYSCVGVFQHG 137 IDLGTTYSCVG++Q+G Sbjct: 9 IDLGTTYSCVGIYQNG 24 >Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical protein F44E5.4 protein. Length = 645 Score = 210 bits (514), Expect = 6e-55 Identities = 105/170 (61%), Positives = 125/170 (73%) Frame = +2 Query: 206 TERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVA 385 TERL+GDAAK+Q A NP NT+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V Sbjct: 47 TERLVGDAAKDQAARNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVE 106 Query: 386 YKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISG 565 KGE + F PEE+S+MVL KMKETAE YLG TV++AVITVPAYFNDSQRQATKDA TI+G Sbjct: 107 VKGEKRQFNPEEISAMVLQKMKETAETYLGHTVKDAVITVPAYFNDSQRQATKDAATIAG 166 Query: 566 LNVLRIINEPTAACDCLRS*QKGYWENEMYLSLTSAAVLLDVSXLTSEDG 715 LN +RIINEPTAA KG + + L DVS L+ +G Sbjct: 167 LNAIRIINEPTAAA-LAYGLDKGIQDEKNVLIFDLGGGTFDVSILSIAEG 215 Score = 44.0 bits (99), Expect = 1e-04 Identities = 18/22 (81%), Positives = 21/22 (95%) Frame = +1 Query: 136 GKVEIIANDQGNRTTPSYVAFT 201 GKVEI+AN +GN+TTPSYVAFT Sbjct: 24 GKVEILANSEGNKTTPSYVAFT 45 Score = 35.5 bits (78), Expect = 0.041 Identities = 13/16 (81%), Positives = 16/16 (100%) Frame = +3 Query: 90 IDLGTTYSCVGVFQHG 137 IDLGTTYSCVG++Q+G Sbjct: 9 IDLGTTYSCVGIYQNG 24 >AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock protein protein 4 protein. Length = 657 Score = 207 bits (505), Expect = 7e-54 Identities = 102/171 (59%), Positives = 125/171 (73%) Frame = +2 Query: 209 ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAY 388 ERLIGDAAKNQ+ +NP NTIFDAKRLIGR + + TVQ D+KHWPF++V KP ++V Sbjct: 76 ERLIGDAAKNQLTINPENTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKV 135 Query: 389 KGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGL 568 E K F PEEVS+MVLTKMK+ AE+YLG V+NAV+TVPAYFND+Q+QATKDAG+I+GL Sbjct: 136 GSETKQFTPEEVSAMVLTKMKQIAESYLGHEVKNAVVTVPAYFNDAQKQATKDAGSIAGL 195 Query: 569 NVLRIINEPTAACDCLRS*QKGYWENEMYLSLTSAAVLLDVSXLTSEDGIF 721 NV+RIINEPTAA +K N + L DVS LT + G+F Sbjct: 196 NVVRIINEPTAAAIAYGLDKKDGERNILVFDLGGGT--FDVSLLTIDSGVF 244 Score = 44.4 bits (100), Expect = 9e-05 Identities = 19/22 (86%), Positives = 21/22 (95%) Frame = +1 Query: 136 GKVEIIANDQGNRTTPSYVAFT 201 G+VEIIANDQGNR TPSYVAF+ Sbjct: 50 GRVEIIANDQGNRITPSYVAFS 71 Score = 35.5 bits (78), Expect = 0.041 Identities = 14/16 (87%), Positives = 16/16 (100%) Frame = +3 Query: 90 IDLGTTYSCVGVFQHG 137 IDLGTTYSCVGVF++G Sbjct: 35 IDLGTTYSCVGVFKNG 50 >Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical protein C12C8.1 protein. Length = 643 Score = 204 bits (498), Expect = 5e-53 Identities = 102/170 (60%), Positives = 124/170 (72%) Frame = +2 Query: 206 TERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVA 385 TERL+GDAAK+Q A NP NT+FDAKRLIGR+F++ TVQ+D+KHWPF V GKP ++V Sbjct: 47 TERLVGDAAKDQAARNPENTVFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVE 106 Query: 386 YKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISG 565 KGE + F EE+S+MVL KMKETAEA LG +V++AVITVPAYFNDSQRQATKDA TI+G Sbjct: 107 VKGEKREFNAEEISAMVLQKMKETAEAVLGHSVRDAVITVPAYFNDSQRQATKDAATIAG 166 Query: 566 LNVLRIINEPTAACDCLRS*QKGYWENEMYLSLTSAAVLLDVSXLTSEDG 715 LN +RIINEPTAA KG + + L DVS L+ +G Sbjct: 167 LNAIRIINEPTAAA-LAYGLDKGITDEKNILIFDLGGGTFDVSILSIAEG 215 Score = 44.0 bits (99), Expect = 1e-04 Identities = 18/22 (81%), Positives = 21/22 (95%) Frame = +1 Query: 136 GKVEIIANDQGNRTTPSYVAFT 201 GKVEI+AN +GN+TTPSYVAFT Sbjct: 24 GKVEILANSEGNKTTPSYVAFT 45 Score = 35.5 bits (78), Expect = 0.041 Identities = 13/16 (81%), Positives = 16/16 (100%) Frame = +3 Query: 90 IDLGTTYSCVGVFQHG 137 IDLGTTYSCVG++Q+G Sbjct: 9 IDLGTTYSCVGIYQNG 24 >U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein protein 6 protein. Length = 657 Score = 157 bits (380), Expect = 1e-38 Identities = 79/133 (59%), Positives = 97/133 (72%), Gaps = 1/133 (0%) Frame = +2 Query: 209 ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVA 385 ERL+G AK Q N NT+F KRLIGR++ED VQ D+K P+++V + G ++ Sbjct: 76 ERLVGAPAKRQAVTNSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVEA- 134 Query: 386 YKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISG 565 + K + P +V + VL KMKETAE+YLG TV NAV+TVPAYFNDSQRQATKDAG ISG Sbjct: 135 ---QGKVYSPSQVGAFVLMKMKETAESYLGTTVNNAVVTVPAYFNDSQRQATKDAGQISG 191 Query: 566 LNVLRIINEPTAA 604 LNVLR+INEPTAA Sbjct: 192 LNVLRVINEPTAA 204 Score = 30.3 bits (65), Expect = 1.5 Identities = 17/32 (53%), Positives = 21/32 (65%), Gaps = 1/32 (3%) Frame = +1 Query: 109 TLALVSSSTGKV-EIIANDQGNRTTPSYVAFT 201 T + VS GK ++I N +G RTTPS VAFT Sbjct: 41 TNSCVSIMEGKTPKVIENAEGVRTTPSTVAFT 72 >X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. Length = 487 Score = 153 bits (372), Expect = 1e-37 Identities = 78/133 (58%), Positives = 96/133 (72%), Gaps = 1/133 (0%) Frame = +2 Query: 209 ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVA 385 ERL+G AK Q N NT+F KRLIGR++ED VQ D+K P+++V + G ++ Sbjct: 76 ERLVGAPAKRQAVTNSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVEA- 134 Query: 386 YKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISG 565 + K + P +V + VL KMKETAE+YLG TV N V+TVPAYFNDSQRQATKDAG ISG Sbjct: 135 ---QGKEYPPSQVGAFVLMKMKETAESYLGTTVNNPVVTVPAYFNDSQRQATKDAGQISG 191 Query: 566 LNVLRIINEPTAA 604 LNVLR+INEPTAA Sbjct: 192 LNVLRVINEPTAA 204 Score = 30.3 bits (65), Expect = 1.5 Identities = 17/32 (53%), Positives = 21/32 (65%), Gaps = 1/32 (3%) Frame = +1 Query: 109 TLALVSSSTGKV-EIIANDQGNRTTPSYVAFT 201 T + VS GK ++I N +G RTTPS VAFT Sbjct: 41 TNSCVSIMEGKTPKVIENAEGVRTTPSTVAFT 72 >Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical protein F11F1.1 protein. Length = 607 Score = 121 bits (292), Expect = 5e-28 Identities = 63/131 (48%), Positives = 88/131 (67%), Gaps = 1/131 (0%) Frame = +2 Query: 215 LIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSD-GGKPKIKVAYK 391 LIG AK+ + N++FD KR+IGR+++D +Q DM WPF+V D G P +++ Sbjct: 47 LIGQHAKDVIG-KATNSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKN 105 Query: 392 GEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLN 571 + F VSS++L +K AE LG V++AVITVPAYFN +QR+AT++A I+GL Sbjct: 106 EKPLKFSAVTVSSLILRCLKYNAERKLGLEVKSAVITVPAYFNATQRRATEEAAEIAGLK 165 Query: 572 VLRIINEPTAA 604 VLRI+NEPTAA Sbjct: 166 VLRILNEPTAA 176 Score = 29.9 bits (64), Expect = 2.0 Identities = 11/16 (68%), Positives = 14/16 (87%) Frame = +3 Query: 90 IDLGTTYSCVGVFQHG 137 IDLGTT+SCV +Q+G Sbjct: 5 IDLGTTFSCVAYYQNG 20 >Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical protein F11F1.1 protein. Length = 607 Score = 121 bits (292), Expect = 5e-28 Identities = 63/131 (48%), Positives = 88/131 (67%), Gaps = 1/131 (0%) Frame = +2 Query: 215 LIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSD-GGKPKIKVAYK 391 LIG AK+ + N++FD KR+IGR+++D +Q DM WPF+V D G P +++ Sbjct: 47 LIGQHAKDVIG-KATNSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKN 105 Query: 392 GEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLN 571 + F VSS++L +K AE LG V++AVITVPAYFN +QR+AT++A I+GL Sbjct: 106 EKPLKFSAVTVSSLILRCLKYNAERKLGLEVKSAVITVPAYFNATQRRATEEAAEIAGLK 165 Query: 572 VLRIINEPTAA 604 VLRI+NEPTAA Sbjct: 166 VLRILNEPTAA 176 Score = 29.9 bits (64), Expect = 2.0 Identities = 11/16 (68%), Positives = 14/16 (87%) Frame = +3 Query: 90 IDLGTTYSCVGVFQHG 137 IDLGTT+SCV +Q+G Sbjct: 5 IDLGTTFSCVAYYQNG 20 >Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical protein F54C9.2 protein. Length = 450 Score = 108 bits (259), Expect = 5e-24 Identities = 65/172 (37%), Positives = 92/172 (53%), Gaps = 3/172 (1%) Frame = +2 Query: 215 LIGDAAKNQVAMNPNNTIFDAKRLIGRKFE--DATVQADMKHWPFEVVSDG-GKPKIKVA 385 LIG A Q NP TI+DAKR IGR FE + +D K +PF++ D GK ++ Sbjct: 82 LIGTRATEQQEHNPKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIP 141 Query: 386 YKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISG 565 K +PEE+ S+++ +K A +LG T+ VI+ PA FN+ QR T A I+ Sbjct: 142 LDSGTKNVYPEEIGSLIIGYLKSAAAKHLGVTLGQVVISCPAEFNEKQRNFTAKAAEIAE 201 Query: 566 LNVLRIINEPTAACDCLRS*QKGYWENEMYLSLTSAAVLLDVSXLTSEDGIF 721 + V R+I+EPTAA +K EN + + L LDVS L + G+F Sbjct: 202 MEVRRVISEPTAAALAYGLHKKQGVENVVVVDLGGGT--LDVSVLWLQGGVF 251 >L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical protein C30C11.4 protein. Length = 776 Score = 98.7 bits (235), Expect = 4e-21 Identities = 56/134 (41%), Positives = 78/134 (58%), Gaps = 3/134 (2%) Frame = +2 Query: 209 ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVA 385 +R +G AA+ V N NT+ + K LIGRKF D Q + P +VV ++V+ Sbjct: 45 DRSMGVAARQAVTTNIKNTVINFKHLIGRKFSDPVAQRFIPFIPCKVVKLPNDDIGVQVS 104 Query: 386 YKGEDKTFFPEEVSSMVLTKMKETAEAYLG--KTVQNAVITVPAYFNDSQRQATKDAGTI 559 Y GE TF PE+V + +LTK++ E+ L K V + V+ VP+YF D QR+A A Sbjct: 105 YLGEPHTFTPEQVLAALLTKLRTIVESQLSDVKKVSDCVLAVPSYFTDVQRRAVLSAIQY 164 Query: 560 SGLNVLRIINEPTA 601 +GLN LRI+NE TA Sbjct: 165 AGLNSLRIVNETTA 178 >Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical protein T14G8.3b protein. Length = 905 Score = 70.1 bits (164), Expect = 2e-12 Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 1/133 (0%) Frame = +2 Query: 209 ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVA 385 ER +AA + +P ++ +I RK D K +PF D + + Sbjct: 55 ERFFAEAAAAMSSSHPQSSYNFLLSMIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFP 114 Query: 386 YKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISG 565 YK E+K + E + +M+L K+ EAY +TV++ VITVP + N ++R+A A I+G Sbjct: 115 YK-EEK-YNVETLLAMILWNAKKVTEAYADQTVKDVVITVPIFLNQAERRAIASAAEIAG 172 Query: 566 LNVLRIINEPTAA 604 LN+L+++N+ +AA Sbjct: 173 LNLLQLLNDGSAA 185 >Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical protein T14G8.3a protein. Length = 921 Score = 70.1 bits (164), Expect = 2e-12 Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 1/133 (0%) Frame = +2 Query: 209 ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVA 385 ER +AA + +P ++ +I RK D K +PF D + + Sbjct: 71 ERFFAEAAAAMSSSHPQSSYNFLLSMIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFP 130 Query: 386 YKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISG 565 YK E+K + E + +M+L K+ EAY +TV++ VITVP + N ++R+A A I+G Sbjct: 131 YK-EEK-YNVETLLAMILWNAKKVTEAYADQTVKDVVITVPIFLNQAERRAIASAAEIAG 188 Query: 566 LNVLRIINEPTAA 604 LN+L+++N+ +AA Sbjct: 189 LNLLQLLNDGSAA 201 >U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical protein T24H7.2 protein. Length = 925 Score = 62.5 bits (145), Expect = 3e-10 Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 1/136 (0%) Frame = +2 Query: 200 QXTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIK 379 Q R DAA P+ L+G+ + + + + F V D K Sbjct: 66 QDGHRTFADAAIGMQVRYPHLVHGQLNDLVGKSTQHPSFELFKRRNTFFEVDDAPKNASS 125 Query: 380 VAYKGEDKTFFPEEVSSMVLTKMKETAEAYL-GKTVQNAVITVPAYFNDSQRQATKDAGT 556 + +K +++ E +++M+L K+ E Y +++ VITVP YF ++R A + A Sbjct: 126 INFKLGGESYTVEALTAMILANAKKFTEEYAQAAEIKDVVITVPVYFTPAERLAVERAAQ 185 Query: 557 ISGLNVLRIINEPTAA 604 ++GL VL++IN+ TAA Sbjct: 186 MAGLTVLQLINDGTAA 201 >Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical protein F54E12.2 protein. Length = 1091 Score = 30.3 bits (65), Expect = 1.5 Identities = 13/35 (37%), Positives = 21/35 (60%) Frame = +1 Query: 148 IIANDQGNRTTPSYVAFTXHRASHRRCRQEPGGDE 252 I+A+D G T S ++ H+ + RR R+E G D+ Sbjct: 494 ILADDMGLGKTLSMISLIAHQKAARRARREDGNDD 528 >Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical protein F54E12.2 protein. Length = 1091 Score = 30.3 bits (65), Expect = 1.5 Identities = 13/35 (37%), Positives = 21/35 (60%) Frame = +1 Query: 148 IIANDQGNRTTPSYVAFTXHRASHRRCRQEPGGDE 252 I+A+D G T S ++ H+ + RR R+E G D+ Sbjct: 494 ILADDMGLGKTLSMISLIAHQKAARRARREDGNDD 528 >AF016428-3|AAO26000.3| 445|Caenorhabditis elegans Ground-like (grd related) protein18 protein. Length = 445 Score = 28.7 bits (61), Expect = 4.7 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%) Frame = -3 Query: 145 PPXPCWKTPTQEYVV-PRSIXY 83 PP PC++ PTQ Y P S+ Y Sbjct: 52 PPMPCYQQPTQNYYTQPPSVIY 73 >Z81136-5|CAB03460.2| 733|Caenorhabditis elegans Hypothetical protein W02B8.4 protein. Length = 733 Score = 28.3 bits (60), Expect = 6.2 Identities = 20/76 (26%), Positives = 38/76 (50%) Frame = +2 Query: 263 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 442 T+ AKR I R E T+++D PF +++ +K A K +D+ + ++L Sbjct: 205 TVRRAKRSIIRNAESYTLKSDFDKSPFSIITKHLTNSVK-ALKKKDRI---SKWQDIILR 260 Query: 443 KMKETAEAYLGKTVQN 490 KE+++ K ++N Sbjct: 261 IQKESSQLRKRKEIEN 276 >U61947-14|ABA29341.1| 413|Caenorhabditis elegans Nuclear hormone receptor familyprotein 105, isoform b protein. Length = 413 Score = 27.9 bits (59), Expect = 8.1 Identities = 11/38 (28%), Positives = 17/38 (44%) Frame = -3 Query: 745 SPAVDFTSKDTILRCKXGHVQKDRRRGQR*VHFVLPVP 632 +P T DT +R + H+ + G +HF P P Sbjct: 140 TPLSTITDMDTDIRTRTAHILGEPANGNEQIHFYSPTP 177 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,009,318 Number of Sequences: 27780 Number of extensions: 386909 Number of successful extensions: 1078 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 973 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1053 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1777507862 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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