Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0967
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 246 1e-65
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 239 1e-63
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 215 4e-56
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 215 4e-56
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 210 6e-55
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 210 6e-55
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 207 7e-54
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 204 5e-53
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 157 1e-38
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 153 1e-37
Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical p... 121 5e-28
Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical pr... 121 5e-28
Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical pr... 108 5e-24
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 99 4e-21
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 70 2e-12
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 62 3e-10
Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical p... 30 1.5
AF016428-3|AAO26000.3| 445|Caenorhabditis elegans Ground-like (... 29 4.7
Z81136-5|CAB03460.2| 733|Caenorhabditis elegans Hypothetical pr... 28 6.2
U61947-14|ABA29341.1| 413|Caenorhabditis elegans Nuclear hormon... 28 8.1
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 246 bits (602), Expect = 1e-65
Identities = 122/173 (70%), Positives = 141/173 (81%), Gaps = 1/173 (0%)
Frame = +2
Query: 206 TERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKV 382
TERLIGDAAKNQVAMNP+NT+FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G KPK++V
Sbjct: 47 TERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQV 106
Query: 383 AYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTIS 562
YKGE+K F PEE+SSMVL KMKETAEA+LG TV++AV+TVPAYFNDSQRQATKDAG I+
Sbjct: 107 EYKGENKIFTPEEISSMVLLKMKETAEAFLGTTVKDAVVTVPAYFNDSQRQATKDAGAIA 166
Query: 563 GLNVLRIINEPTAACDCLRS*QKGYWENEMYLSLTSAAVLLDVSXLTSEDGIF 721
GLNVLRIINEPTAA +KG+ E + L DVS LT EDGIF
Sbjct: 167 GLNVLRIINEPTAAAIAYGLDKKGHGERNV-LIFDLGGGTFDVSILTIEDGIF 218
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +1
Query: 136 GKVEIIANDQGNRTTPSYVAFT 201
GKVEIIANDQGNRTTPSYVAFT
Sbjct: 24 GKVEIIANDQGNRTTPSYVAFT 45
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = +3
Query: 72 KHPQ*XIDLGTTYSCVGVFQHG 137
KH IDLGTTYSCVGVF HG
Sbjct: 3 KHNAVGIDLGTTYSCVGVFMHG 24
Score = 32.7 bits (71), Expect = 0.29
Identities = 23/48 (47%), Positives = 24/48 (50%)
Frame = +3
Query: 606 AIAYGLDKKGTGRTKCTYL*PRRRSFWTCPXLHRRMVSFEVKSTAGDT 749
AIAYGLDKKG G +F L FEVKSTAGDT
Sbjct: 181 AIAYGLDKKGHGERNVLIFDLGGGTF-DVSILTIEDGIFEVKSTAGDT 227
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 239 bits (586), Expect = 1e-63
Identities = 119/173 (68%), Positives = 139/173 (80%), Gaps = 1/173 (0%)
Frame = +2
Query: 206 TERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKV 382
TERLIGDAAKNQVAMNP+NT+FDAKRLIGRKF+D VQ+DMKHWPF+V+S +G KPK++V
Sbjct: 47 TERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQV 106
Query: 383 AYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTIS 562
YKGE+K F PEE+SSMVL KMK+TAEA+L TV++AV+TVP YFNDSQRQATKDAG I+
Sbjct: 107 EYKGENKIFTPEEISSMVLLKMKKTAEAFLEPTVKDAVVTVPTYFNDSQRQATKDAGAIA 166
Query: 563 GLNVLRIINEPTAACDCLRS*QKGYWENEMYLSLTSAAVLLDVSXLTSEDGIF 721
GLNVLRIINEPTAA +KG+ E + L DVS LT EDGIF
Sbjct: 167 GLNVLRIINEPTAAAIAYGLDKKGHGERNV-LIFDLGGGTFDVSILTIEDGIF 218
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/22 (100%), Positives = 22/22 (100%)
Frame = +1
Query: 136 GKVEIIANDQGNRTTPSYVAFT 201
GKVEIIANDQGNRTTPSYVAFT
Sbjct: 24 GKVEIIANDQGNRTTPSYVAFT 45
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/22 (77%), Positives = 17/22 (77%)
Frame = +3
Query: 72 KHPQ*XIDLGTTYSCVGVFQHG 137
KH IDLGTTYSCVGVF HG
Sbjct: 3 KHNAVGIDLGTTYSCVGVFMHG 24
Score = 32.7 bits (71), Expect = 0.29
Identities = 23/48 (47%), Positives = 24/48 (50%)
Frame = +3
Query: 606 AIAYGLDKKGTGRTKCTYL*PRRRSFWTCPXLHRRMVSFEVKSTAGDT 749
AIAYGLDKKG G +F L FEVKSTAGDT
Sbjct: 181 AIAYGLDKKGHGERNVLIFDLGGGTF-DVSILTIEDGIFEVKSTAGDT 227
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 215 bits (524), Expect = 4e-56
Identities = 105/171 (61%), Positives = 128/171 (74%)
Frame = +2
Query: 209 ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAY 388
+RLIGDAAKNQ+ +NP NTIFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V
Sbjct: 79 DRLIGDAAKNQLTINPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKV 138
Query: 389 KGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGL 568
++K F PEEVS+MVL KMKE AE+YLGK V+NAV+TVPAYFND+QRQATKDAGTI+GL
Sbjct: 139 GSDNKQFTPEEVSAMVLVKMKEIAESYLGKEVKNAVVTVPAYFNDAQRQATKDAGTIAGL 198
Query: 569 NVLRIINEPTAACDCLRS*QKGYWENEMYLSLTSAAVLLDVSXLTSEDGIF 721
NV+RIINEPTAA +K N + L DVS LT ++G+F
Sbjct: 199 NVVRIINEPTAAAIAYGLDKKDGERNILVFDLGGGT--FDVSMLTIDNGVF 247
Score = 44.4 bits (100), Expect = 9e-05
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +1
Query: 136 GKVEIIANDQGNRTTPSYVAFT 201
G+VEIIANDQGNR TPSYVAF+
Sbjct: 53 GRVEIIANDQGNRITPSYVAFS 74
Score = 34.3 bits (75), Expect = 0.094
Identities = 13/16 (81%), Positives = 16/16 (100%)
Frame = +3
Query: 90 IDLGTTYSCVGVFQHG 137
IDLGTTYSCVGV+++G
Sbjct: 38 IDLGTTYSCVGVYKNG 53
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 215 bits (524), Expect = 4e-56
Identities = 105/171 (61%), Positives = 128/171 (74%)
Frame = +2
Query: 209 ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAY 388
+RLIGDAAKNQ+ +NP NTIFDAKRLIGR + D TVQAD+KHWPF+V+ KP ++V
Sbjct: 79 DRLIGDAAKNQLTINPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKV 138
Query: 389 KGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGL 568
++K F PEEVS+MVL KMKE AE+YLGK V+NAV+TVPAYFND+QRQATKDAGTI+GL
Sbjct: 139 GSDNKQFTPEEVSAMVLVKMKEIAESYLGKEVKNAVVTVPAYFNDAQRQATKDAGTIAGL 198
Query: 569 NVLRIINEPTAACDCLRS*QKGYWENEMYLSLTSAAVLLDVSXLTSEDGIF 721
NV+RIINEPTAA +K N + L DVS LT ++G+F
Sbjct: 199 NVVRIINEPTAAAIAYGLDKKDGERNILVFDLGGGT--FDVSMLTIDNGVF 247
Score = 44.4 bits (100), Expect = 9e-05
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +1
Query: 136 GKVEIIANDQGNRTTPSYVAFT 201
G+VEIIANDQGNR TPSYVAF+
Sbjct: 53 GRVEIIANDQGNRITPSYVAFS 74
Score = 34.3 bits (75), Expect = 0.094
Identities = 13/16 (81%), Positives = 16/16 (100%)
Frame = +3
Query: 90 IDLGTTYSCVGVFQHG 137
IDLGTTYSCVGV+++G
Sbjct: 38 IDLGTTYSCVGVYKNG 53
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 210 bits (514), Expect = 6e-55
Identities = 105/170 (61%), Positives = 125/170 (73%)
Frame = +2
Query: 206 TERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVA 385
TERL+GDAAK+Q A NP NT+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V
Sbjct: 47 TERLVGDAAKDQAARNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVE 106
Query: 386 YKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISG 565
KGE + F PEE+S+MVL KMKETAE YLG TV++AVITVPAYFNDSQRQATKDA TI+G
Sbjct: 107 VKGEKRQFNPEEISAMVLQKMKETAETYLGHTVKDAVITVPAYFNDSQRQATKDAATIAG 166
Query: 566 LNVLRIINEPTAACDCLRS*QKGYWENEMYLSLTSAAVLLDVSXLTSEDG 715
LN +RIINEPTAA KG + + L DVS L+ +G
Sbjct: 167 LNAIRIINEPTAAA-LAYGLDKGIQDEKNVLIFDLGGGTFDVSILSIAEG 215
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +1
Query: 136 GKVEIIANDQGNRTTPSYVAFT 201
GKVEI+AN +GN+TTPSYVAFT
Sbjct: 24 GKVEILANSEGNKTTPSYVAFT 45
Score = 35.5 bits (78), Expect = 0.041
Identities = 13/16 (81%), Positives = 16/16 (100%)
Frame = +3
Query: 90 IDLGTTYSCVGVFQHG 137
IDLGTTYSCVG++Q+G
Sbjct: 9 IDLGTTYSCVGIYQNG 24
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 210 bits (514), Expect = 6e-55
Identities = 105/170 (61%), Positives = 125/170 (73%)
Frame = +2
Query: 206 TERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVA 385
TERL+GDAAK+Q A NP NT+FDAKRLIGR+F+++TVQ+D KHWPF V GKP I+V
Sbjct: 47 TERLVGDAAKDQAARNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVE 106
Query: 386 YKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISG 565
KGE + F PEE+S+MVL KMKETAE YLG TV++AVITVPAYFNDSQRQATKDA TI+G
Sbjct: 107 VKGEKRQFNPEEISAMVLQKMKETAETYLGHTVKDAVITVPAYFNDSQRQATKDAATIAG 166
Query: 566 LNVLRIINEPTAACDCLRS*QKGYWENEMYLSLTSAAVLLDVSXLTSEDG 715
LN +RIINEPTAA KG + + L DVS L+ +G
Sbjct: 167 LNAIRIINEPTAAA-LAYGLDKGIQDEKNVLIFDLGGGTFDVSILSIAEG 215
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +1
Query: 136 GKVEIIANDQGNRTTPSYVAFT 201
GKVEI+AN +GN+TTPSYVAFT
Sbjct: 24 GKVEILANSEGNKTTPSYVAFT 45
Score = 35.5 bits (78), Expect = 0.041
Identities = 13/16 (81%), Positives = 16/16 (100%)
Frame = +3
Query: 90 IDLGTTYSCVGVFQHG 137
IDLGTTYSCVG++Q+G
Sbjct: 9 IDLGTTYSCVGIYQNG 24
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 207 bits (505), Expect = 7e-54
Identities = 102/171 (59%), Positives = 125/171 (73%)
Frame = +2
Query: 209 ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAY 388
ERLIGDAAKNQ+ +NP NTIFDAKRLIGR + + TVQ D+KHWPF++V KP ++V
Sbjct: 76 ERLIGDAAKNQLTINPENTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKV 135
Query: 389 KGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGL 568
E K F PEEVS+MVLTKMK+ AE+YLG V+NAV+TVPAYFND+Q+QATKDAG+I+GL
Sbjct: 136 GSETKQFTPEEVSAMVLTKMKQIAESYLGHEVKNAVVTVPAYFNDAQKQATKDAGSIAGL 195
Query: 569 NVLRIINEPTAACDCLRS*QKGYWENEMYLSLTSAAVLLDVSXLTSEDGIF 721
NV+RIINEPTAA +K N + L DVS LT + G+F
Sbjct: 196 NVVRIINEPTAAAIAYGLDKKDGERNILVFDLGGGT--FDVSLLTIDSGVF 244
Score = 44.4 bits (100), Expect = 9e-05
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +1
Query: 136 GKVEIIANDQGNRTTPSYVAFT 201
G+VEIIANDQGNR TPSYVAF+
Sbjct: 50 GRVEIIANDQGNRITPSYVAFS 71
Score = 35.5 bits (78), Expect = 0.041
Identities = 14/16 (87%), Positives = 16/16 (100%)
Frame = +3
Query: 90 IDLGTTYSCVGVFQHG 137
IDLGTTYSCVGVF++G
Sbjct: 35 IDLGTTYSCVGVFKNG 50
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 204 bits (498), Expect = 5e-53
Identities = 102/170 (60%), Positives = 124/170 (72%)
Frame = +2
Query: 206 TERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVA 385
TERL+GDAAK+Q A NP NT+FDAKRLIGR+F++ TVQ+D+KHWPF V GKP ++V
Sbjct: 47 TERLVGDAAKDQAARNPENTVFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVE 106
Query: 386 YKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISG 565
KGE + F EE+S+MVL KMKETAEA LG +V++AVITVPAYFNDSQRQATKDA TI+G
Sbjct: 107 VKGEKREFNAEEISAMVLQKMKETAEAVLGHSVRDAVITVPAYFNDSQRQATKDAATIAG 166
Query: 566 LNVLRIINEPTAACDCLRS*QKGYWENEMYLSLTSAAVLLDVSXLTSEDG 715
LN +RIINEPTAA KG + + L DVS L+ +G
Sbjct: 167 LNAIRIINEPTAAA-LAYGLDKGITDEKNILIFDLGGGTFDVSILSIAEG 215
Score = 44.0 bits (99), Expect = 1e-04
Identities = 18/22 (81%), Positives = 21/22 (95%)
Frame = +1
Query: 136 GKVEIIANDQGNRTTPSYVAFT 201
GKVEI+AN +GN+TTPSYVAFT
Sbjct: 24 GKVEILANSEGNKTTPSYVAFT 45
Score = 35.5 bits (78), Expect = 0.041
Identities = 13/16 (81%), Positives = 16/16 (100%)
Frame = +3
Query: 90 IDLGTTYSCVGVFQHG 137
IDLGTTYSCVG++Q+G
Sbjct: 9 IDLGTTYSCVGIYQNG 24
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 157 bits (380), Expect = 1e-38
Identities = 79/133 (59%), Positives = 97/133 (72%), Gaps = 1/133 (0%)
Frame = +2
Query: 209 ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVA 385
ERL+G AK Q N NT+F KRLIGR++ED VQ D+K P+++V + G ++
Sbjct: 76 ERLVGAPAKRQAVTNSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVEA- 134
Query: 386 YKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISG 565
+ K + P +V + VL KMKETAE+YLG TV NAV+TVPAYFNDSQRQATKDAG ISG
Sbjct: 135 ---QGKVYSPSQVGAFVLMKMKETAESYLGTTVNNAVVTVPAYFNDSQRQATKDAGQISG 191
Query: 566 LNVLRIINEPTAA 604
LNVLR+INEPTAA
Sbjct: 192 LNVLRVINEPTAA 204
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/32 (53%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +1
Query: 109 TLALVSSSTGKV-EIIANDQGNRTTPSYVAFT 201
T + VS GK ++I N +G RTTPS VAFT
Sbjct: 41 TNSCVSIMEGKTPKVIENAEGVRTTPSTVAFT 72
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 153 bits (372), Expect = 1e-37
Identities = 78/133 (58%), Positives = 96/133 (72%), Gaps = 1/133 (0%)
Frame = +2
Query: 209 ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVA 385
ERL+G AK Q N NT+F KRLIGR++ED VQ D+K P+++V + G ++
Sbjct: 76 ERLVGAPAKRQAVTNSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVEA- 134
Query: 386 YKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISG 565
+ K + P +V + VL KMKETAE+YLG TV N V+TVPAYFNDSQRQATKDAG ISG
Sbjct: 135 ---QGKEYPPSQVGAFVLMKMKETAESYLGTTVNNPVVTVPAYFNDSQRQATKDAGQISG 191
Query: 566 LNVLRIINEPTAA 604
LNVLR+INEPTAA
Sbjct: 192 LNVLRVINEPTAA 204
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/32 (53%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Frame = +1
Query: 109 TLALVSSSTGKV-EIIANDQGNRTTPSYVAFT 201
T + VS GK ++I N +G RTTPS VAFT
Sbjct: 41 TNSCVSIMEGKTPKVIENAEGVRTTPSTVAFT 72
>Z81113-10|CAB54300.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 121 bits (292), Expect = 5e-28
Identities = 63/131 (48%), Positives = 88/131 (67%), Gaps = 1/131 (0%)
Frame = +2
Query: 215 LIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSD-GGKPKIKVAYK 391
LIG AK+ + N++FD KR+IGR+++D +Q DM WPF+V D G P +++
Sbjct: 47 LIGQHAKDVIG-KATNSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKN 105
Query: 392 GEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLN 571
+ F VSS++L +K AE LG V++AVITVPAYFN +QR+AT++A I+GL
Sbjct: 106 EKPLKFSAVTVSSLILRCLKYNAERKLGLEVKSAVITVPAYFNATQRRATEEAAEIAGLK 165
Query: 572 VLRIINEPTAA 604
VLRI+NEPTAA
Sbjct: 166 VLRILNEPTAA 176
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3
Query: 90 IDLGTTYSCVGVFQHG 137
IDLGTT+SCV +Q+G
Sbjct: 5 IDLGTTFSCVAYYQNG 20
>Z81059-7|CAB54217.1| 607|Caenorhabditis elegans Hypothetical
protein F11F1.1 protein.
Length = 607
Score = 121 bits (292), Expect = 5e-28
Identities = 63/131 (48%), Positives = 88/131 (67%), Gaps = 1/131 (0%)
Frame = +2
Query: 215 LIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSD-GGKPKIKVAYK 391
LIG AK+ + N++FD KR+IGR+++D +Q DM WPF+V D G P +++
Sbjct: 47 LIGQHAKDVIG-KATNSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKN 105
Query: 392 GEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLN 571
+ F VSS++L +K AE LG V++AVITVPAYFN +QR+AT++A I+GL
Sbjct: 106 EKPLKFSAVTVSSLILRCLKYNAERKLGLEVKSAVITVPAYFNATQRRATEEAAEIAGLK 165
Query: 572 VLRIINEPTAA 604
VLRI+NEPTAA
Sbjct: 166 VLRILNEPTAA 176
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3
Query: 90 IDLGTTYSCVGVFQHG 137
IDLGTT+SCV +Q+G
Sbjct: 5 IDLGTTFSCVAYYQNG 20
>Z49967-2|CAA90248.2| 450|Caenorhabditis elegans Hypothetical
protein F54C9.2 protein.
Length = 450
Score = 108 bits (259), Expect = 5e-24
Identities = 65/172 (37%), Positives = 92/172 (53%), Gaps = 3/172 (1%)
Frame = +2
Query: 215 LIGDAAKNQVAMNPNNTIFDAKRLIGRKFE--DATVQADMKHWPFEVVSDG-GKPKIKVA 385
LIG A Q NP TI+DAKR IGR FE + +D K +PF++ D GK ++
Sbjct: 82 LIGTRATEQQEHNPKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIP 141
Query: 386 YKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISG 565
K +PEE+ S+++ +K A +LG T+ VI+ PA FN+ QR T A I+
Sbjct: 142 LDSGTKNVYPEEIGSLIIGYLKSAAAKHLGVTLGQVVISCPAEFNEKQRNFTAKAAEIAE 201
Query: 566 LNVLRIINEPTAACDCLRS*QKGYWENEMYLSLTSAAVLLDVSXLTSEDGIF 721
+ V R+I+EPTAA +K EN + + L LDVS L + G+F
Sbjct: 202 MEVRRVISEPTAAALAYGLHKKQGVENVVVVDLGGGT--LDVSVLWLQGGVF 251
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 98.7 bits (235), Expect = 4e-21
Identities = 56/134 (41%), Positives = 78/134 (58%), Gaps = 3/134 (2%)
Frame = +2
Query: 209 ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVA 385
+R +G AA+ V N NT+ + K LIGRKF D Q + P +VV ++V+
Sbjct: 45 DRSMGVAARQAVTTNIKNTVINFKHLIGRKFSDPVAQRFIPFIPCKVVKLPNDDIGVQVS 104
Query: 386 YKGEDKTFFPEEVSSMVLTKMKETAEAYLG--KTVQNAVITVPAYFNDSQRQATKDAGTI 559
Y GE TF PE+V + +LTK++ E+ L K V + V+ VP+YF D QR+A A
Sbjct: 105 YLGEPHTFTPEQVLAALLTKLRTIVESQLSDVKKVSDCVLAVPSYFTDVQRRAVLSAIQY 164
Query: 560 SGLNVLRIINEPTA 601
+GLN LRI+NE TA
Sbjct: 165 AGLNSLRIVNETTA 178
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 70.1 bits (164), Expect = 2e-12
Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
Frame = +2
Query: 209 ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVA 385
ER +AA + +P ++ +I RK D K +PF D + +
Sbjct: 55 ERFFAEAAAAMSSSHPQSSYNFLLSMIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFP 114
Query: 386 YKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISG 565
YK E+K + E + +M+L K+ EAY +TV++ VITVP + N ++R+A A I+G
Sbjct: 115 YK-EEK-YNVETLLAMILWNAKKVTEAYADQTVKDVVITVPIFLNQAERRAIASAAEIAG 172
Query: 566 LNVLRIINEPTAA 604
LN+L+++N+ +AA
Sbjct: 173 LNLLQLLNDGSAA 185
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 70.1 bits (164), Expect = 2e-12
Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
Frame = +2
Query: 209 ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVA 385
ER +AA + +P ++ +I RK D K +PF D + +
Sbjct: 71 ERFFAEAAAAMSSSHPQSSYNFLLSMIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFP 130
Query: 386 YKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISG 565
YK E+K + E + +M+L K+ EAY +TV++ VITVP + N ++R+A A I+G
Sbjct: 131 YK-EEK-YNVETLLAMILWNAKKVTEAYADQTVKDVVITVPIFLNQAERRAIASAAEIAG 188
Query: 566 LNVLRIINEPTAA 604
LN+L+++N+ +AA
Sbjct: 189 LNLLQLLNDGSAA 201
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 62.5 bits (145), Expect = 3e-10
Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 1/136 (0%)
Frame = +2
Query: 200 QXTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIK 379
Q R DAA P+ L+G+ + + + + F V D K
Sbjct: 66 QDGHRTFADAAIGMQVRYPHLVHGQLNDLVGKSTQHPSFELFKRRNTFFEVDDAPKNASS 125
Query: 380 VAYKGEDKTFFPEEVSSMVLTKMKETAEAYL-GKTVQNAVITVPAYFNDSQRQATKDAGT 556
+ +K +++ E +++M+L K+ E Y +++ VITVP YF ++R A + A
Sbjct: 126 INFKLGGESYTVEALTAMILANAKKFTEEYAQAAEIKDVVITVPVYFTPAERLAVERAAQ 185
Query: 557 ISGLNVLRIINEPTAA 604
++GL VL++IN+ TAA
Sbjct: 186 MAGLTVLQLINDGTAA 201
>Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical
protein F54E12.2 protein.
Length = 1091
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 148 IIANDQGNRTTPSYVAFTXHRASHRRCRQEPGGDE 252
I+A+D G T S ++ H+ + RR R+E G D+
Sbjct: 494 ILADDMGLGKTLSMISLIAHQKAARRARREDGNDD 528
>Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical
protein F54E12.2 protein.
Length = 1091
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 148 IIANDQGNRTTPSYVAFTXHRASHRRCRQEPGGDE 252
I+A+D G T S ++ H+ + RR R+E G D+
Sbjct: 494 ILADDMGLGKTLSMISLIAHQKAARRARREDGNDD 528
>AF016428-3|AAO26000.3| 445|Caenorhabditis elegans Ground-like (grd
related) protein18 protein.
Length = 445
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = -3
Query: 145 PPXPCWKTPTQEYVV-PRSIXY 83
PP PC++ PTQ Y P S+ Y
Sbjct: 52 PPMPCYQQPTQNYYTQPPSVIY 73
>Z81136-5|CAB03460.2| 733|Caenorhabditis elegans Hypothetical
protein W02B8.4 protein.
Length = 733
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/76 (26%), Positives = 38/76 (50%)
Frame = +2
Query: 263 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 442
T+ AKR I R E T+++D PF +++ +K A K +D+ + ++L
Sbjct: 205 TVRRAKRSIIRNAESYTLKSDFDKSPFSIITKHLTNSVK-ALKKKDRI---SKWQDIILR 260
Query: 443 KMKETAEAYLGKTVQN 490
KE+++ K ++N
Sbjct: 261 IQKESSQLRKRKEIEN 276
>U61947-14|ABA29341.1| 413|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 105, isoform b protein.
Length = 413
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = -3
Query: 745 SPAVDFTSKDTILRCKXGHVQKDRRRGQR*VHFVLPVP 632
+P T DT +R + H+ + G +HF P P
Sbjct: 140 TPLSTITDMDTDIRTRTAHILGEPANGNEQIHFYSPTP 177
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,009,318
Number of Sequences: 27780
Number of extensions: 386909
Number of successful extensions: 1078
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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