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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0967
         (750 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80223-1|CAB02319.1|  640|Caenorhabditis elegans Hypothetical pr...   246   1e-65
M18540-1|AAA28078.1|  640|Caenorhabditis elegans protein ( C.ele...   239   1e-63
U56965-1|AAB52671.1|  661|Caenorhabditis elegans Heat shock prot...   215   4e-56
M26604-1|AAA28074.1|  661|Caenorhabditis elegans protein ( C. el...   215   4e-56
Z83108-5|CAB05508.1|  645|Caenorhabditis elegans Hypothetical pr...   210   6e-55
Z83108-4|CAB05507.1|  645|Caenorhabditis elegans Hypothetical pr...   210   6e-55
AF000264-1|AAC71123.1|  657|Caenorhabditis elegans Heat shock pr...   207   7e-54
Z81467-1|CAB03871.1|  643|Caenorhabditis elegans Hypothetical pr...   204   5e-53
U88315-3|AAB42371.1|  657|Caenorhabditis elegans Heat shock prot...   157   1e-38
X07678-1|CAA30525.1|  487|Caenorhabditis elegans hsp6F protein.       153   1e-37
Z81113-10|CAB54300.1|  607|Caenorhabditis elegans Hypothetical p...   121   5e-28
Z81059-7|CAB54217.1|  607|Caenorhabditis elegans Hypothetical pr...   121   5e-28
Z49967-2|CAA90248.2|  450|Caenorhabditis elegans Hypothetical pr...   108   5e-24
L09634-1|AAA27967.1|  776|Caenorhabditis elegans Hypothetical pr...    99   4e-21
Z67884-4|CAH60753.1|  905|Caenorhabditis elegans Hypothetical pr...    70   2e-12
Z67884-3|CAA91809.2|  921|Caenorhabditis elegans Hypothetical pr...    70   2e-12
U28940-6|AAA68352.1|  925|Caenorhabditis elegans Hypothetical pr...    62   3e-10
Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical p...    30   1.5  
AF016428-3|AAO26000.3|  445|Caenorhabditis elegans Ground-like (...    29   4.7  
Z81136-5|CAB03460.2|  733|Caenorhabditis elegans Hypothetical pr...    28   6.2  
U61947-14|ABA29341.1|  413|Caenorhabditis elegans Nuclear hormon...    28   8.1  

>Z80223-1|CAB02319.1|  640|Caenorhabditis elegans Hypothetical
           protein F26D10.3 protein.
          Length = 640

 Score =  246 bits (602), Expect = 1e-65
 Identities = 122/173 (70%), Positives = 141/173 (81%), Gaps = 1/173 (0%)
 Frame = +2

Query: 206 TERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKV 382
           TERLIGDAAKNQVAMNP+NT+FDAKRLIGRKF+D  VQ+DMKHWPF+V+S +G KPK++V
Sbjct: 47  TERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQV 106

Query: 383 AYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTIS 562
            YKGE+K F PEE+SSMVL KMKETAEA+LG TV++AV+TVPAYFNDSQRQATKDAG I+
Sbjct: 107 EYKGENKIFTPEEISSMVLLKMKETAEAFLGTTVKDAVVTVPAYFNDSQRQATKDAGAIA 166

Query: 563 GLNVLRIINEPTAACDCLRS*QKGYWENEMYLSLTSAAVLLDVSXLTSEDGIF 721
           GLNVLRIINEPTAA       +KG+ E  + L         DVS LT EDGIF
Sbjct: 167 GLNVLRIINEPTAAAIAYGLDKKGHGERNV-LIFDLGGGTFDVSILTIEDGIF 218



 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 22/22 (100%), Positives = 22/22 (100%)
 Frame = +1

Query: 136 GKVEIIANDQGNRTTPSYVAFT 201
           GKVEIIANDQGNRTTPSYVAFT
Sbjct: 24  GKVEIIANDQGNRTTPSYVAFT 45



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 17/22 (77%), Positives = 17/22 (77%)
 Frame = +3

Query: 72  KHPQ*XIDLGTTYSCVGVFQHG 137
           KH    IDLGTTYSCVGVF HG
Sbjct: 3   KHNAVGIDLGTTYSCVGVFMHG 24



 Score = 32.7 bits (71), Expect = 0.29
 Identities = 23/48 (47%), Positives = 24/48 (50%)
 Frame = +3

Query: 606 AIAYGLDKKGTGRTKCTYL*PRRRSFWTCPXLHRRMVSFEVKSTAGDT 749
           AIAYGLDKKG G            +F     L      FEVKSTAGDT
Sbjct: 181 AIAYGLDKKGHGERNVLIFDLGGGTF-DVSILTIEDGIFEVKSTAGDT 227


>M18540-1|AAA28078.1|  640|Caenorhabditis elegans protein (
           C.elegans heat shockprotein 70A gene, complete cds. ).
          Length = 640

 Score =  239 bits (586), Expect = 1e-63
 Identities = 119/173 (68%), Positives = 139/173 (80%), Gaps = 1/173 (0%)
 Frame = +2

Query: 206 TERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKV 382
           TERLIGDAAKNQVAMNP+NT+FDAKRLIGRKF+D  VQ+DMKHWPF+V+S +G KPK++V
Sbjct: 47  TERLIGDAAKNQVAMNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQV 106

Query: 383 AYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTIS 562
            YKGE+K F PEE+SSMVL KMK+TAEA+L  TV++AV+TVP YFNDSQRQATKDAG I+
Sbjct: 107 EYKGENKIFTPEEISSMVLLKMKKTAEAFLEPTVKDAVVTVPTYFNDSQRQATKDAGAIA 166

Query: 563 GLNVLRIINEPTAACDCLRS*QKGYWENEMYLSLTSAAVLLDVSXLTSEDGIF 721
           GLNVLRIINEPTAA       +KG+ E  + L         DVS LT EDGIF
Sbjct: 167 GLNVLRIINEPTAAAIAYGLDKKGHGERNV-LIFDLGGGTFDVSILTIEDGIF 218



 Score = 49.6 bits (113), Expect = 2e-06
 Identities = 22/22 (100%), Positives = 22/22 (100%)
 Frame = +1

Query: 136 GKVEIIANDQGNRTTPSYVAFT 201
           GKVEIIANDQGNRTTPSYVAFT
Sbjct: 24  GKVEIIANDQGNRTTPSYVAFT 45



 Score = 39.9 bits (89), Expect = 0.002
 Identities = 17/22 (77%), Positives = 17/22 (77%)
 Frame = +3

Query: 72  KHPQ*XIDLGTTYSCVGVFQHG 137
           KH    IDLGTTYSCVGVF HG
Sbjct: 3   KHNAVGIDLGTTYSCVGVFMHG 24



 Score = 32.7 bits (71), Expect = 0.29
 Identities = 23/48 (47%), Positives = 24/48 (50%)
 Frame = +3

Query: 606 AIAYGLDKKGTGRTKCTYL*PRRRSFWTCPXLHRRMVSFEVKSTAGDT 749
           AIAYGLDKKG G            +F     L      FEVKSTAGDT
Sbjct: 181 AIAYGLDKKGHGERNVLIFDLGGGTF-DVSILTIEDGIFEVKSTAGDT 227


>U56965-1|AAB52671.1|  661|Caenorhabditis elegans Heat shock protein
           protein 3 protein.
          Length = 661

 Score =  215 bits (524), Expect = 4e-56
 Identities = 105/171 (61%), Positives = 128/171 (74%)
 Frame = +2

Query: 209 ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAY 388
           +RLIGDAAKNQ+ +NP NTIFDAKRLIGR + D TVQAD+KHWPF+V+    KP ++V  
Sbjct: 79  DRLIGDAAKNQLTINPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKV 138

Query: 389 KGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGL 568
             ++K F PEEVS+MVL KMKE AE+YLGK V+NAV+TVPAYFND+QRQATKDAGTI+GL
Sbjct: 139 GSDNKQFTPEEVSAMVLVKMKEIAESYLGKEVKNAVVTVPAYFNDAQRQATKDAGTIAGL 198

Query: 569 NVLRIINEPTAACDCLRS*QKGYWENEMYLSLTSAAVLLDVSXLTSEDGIF 721
           NV+RIINEPTAA       +K    N +   L       DVS LT ++G+F
Sbjct: 199 NVVRIINEPTAAAIAYGLDKKDGERNILVFDLGGGT--FDVSMLTIDNGVF 247



 Score = 44.4 bits (100), Expect = 9e-05
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = +1

Query: 136 GKVEIIANDQGNRTTPSYVAFT 201
           G+VEIIANDQGNR TPSYVAF+
Sbjct: 53  GRVEIIANDQGNRITPSYVAFS 74



 Score = 34.3 bits (75), Expect = 0.094
 Identities = 13/16 (81%), Positives = 16/16 (100%)
 Frame = +3

Query: 90  IDLGTTYSCVGVFQHG 137
           IDLGTTYSCVGV+++G
Sbjct: 38  IDLGTTYSCVGVYKNG 53


>M26604-1|AAA28074.1|  661|Caenorhabditis elegans protein ( C.
           elegans BiP (hsp3)gene, complete cds. ).
          Length = 661

 Score =  215 bits (524), Expect = 4e-56
 Identities = 105/171 (61%), Positives = 128/171 (74%)
 Frame = +2

Query: 209 ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAY 388
           +RLIGDAAKNQ+ +NP NTIFDAKRLIGR + D TVQAD+KHWPF+V+    KP ++V  
Sbjct: 79  DRLIGDAAKNQLTINPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKV 138

Query: 389 KGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGL 568
             ++K F PEEVS+MVL KMKE AE+YLGK V+NAV+TVPAYFND+QRQATKDAGTI+GL
Sbjct: 139 GSDNKQFTPEEVSAMVLVKMKEIAESYLGKEVKNAVVTVPAYFNDAQRQATKDAGTIAGL 198

Query: 569 NVLRIINEPTAACDCLRS*QKGYWENEMYLSLTSAAVLLDVSXLTSEDGIF 721
           NV+RIINEPTAA       +K    N +   L       DVS LT ++G+F
Sbjct: 199 NVVRIINEPTAAAIAYGLDKKDGERNILVFDLGGGT--FDVSMLTIDNGVF 247



 Score = 44.4 bits (100), Expect = 9e-05
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = +1

Query: 136 GKVEIIANDQGNRTTPSYVAFT 201
           G+VEIIANDQGNR TPSYVAF+
Sbjct: 53  GRVEIIANDQGNRITPSYVAFS 74



 Score = 34.3 bits (75), Expect = 0.094
 Identities = 13/16 (81%), Positives = 16/16 (100%)
 Frame = +3

Query: 90  IDLGTTYSCVGVFQHG 137
           IDLGTTYSCVGV+++G
Sbjct: 38  IDLGTTYSCVGVYKNG 53


>Z83108-5|CAB05508.1|  645|Caenorhabditis elegans Hypothetical
           protein F44E5.5 protein.
          Length = 645

 Score =  210 bits (514), Expect = 6e-55
 Identities = 105/170 (61%), Positives = 125/170 (73%)
 Frame = +2

Query: 206 TERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVA 385
           TERL+GDAAK+Q A NP NT+FDAKRLIGR+F+++TVQ+D KHWPF V    GKP I+V 
Sbjct: 47  TERLVGDAAKDQAARNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVE 106

Query: 386 YKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISG 565
            KGE + F PEE+S+MVL KMKETAE YLG TV++AVITVPAYFNDSQRQATKDA TI+G
Sbjct: 107 VKGEKRQFNPEEISAMVLQKMKETAETYLGHTVKDAVITVPAYFNDSQRQATKDAATIAG 166

Query: 566 LNVLRIINEPTAACDCLRS*QKGYWENEMYLSLTSAAVLLDVSXLTSEDG 715
           LN +RIINEPTAA        KG  + +  L         DVS L+  +G
Sbjct: 167 LNAIRIINEPTAAA-LAYGLDKGIQDEKNVLIFDLGGGTFDVSILSIAEG 215



 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 18/22 (81%), Positives = 21/22 (95%)
 Frame = +1

Query: 136 GKVEIIANDQGNRTTPSYVAFT 201
           GKVEI+AN +GN+TTPSYVAFT
Sbjct: 24  GKVEILANSEGNKTTPSYVAFT 45



 Score = 35.5 bits (78), Expect = 0.041
 Identities = 13/16 (81%), Positives = 16/16 (100%)
 Frame = +3

Query: 90  IDLGTTYSCVGVFQHG 137
           IDLGTTYSCVG++Q+G
Sbjct: 9   IDLGTTYSCVGIYQNG 24


>Z83108-4|CAB05507.1|  645|Caenorhabditis elegans Hypothetical
           protein F44E5.4 protein.
          Length = 645

 Score =  210 bits (514), Expect = 6e-55
 Identities = 105/170 (61%), Positives = 125/170 (73%)
 Frame = +2

Query: 206 TERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVA 385
           TERL+GDAAK+Q A NP NT+FDAKRLIGR+F+++TVQ+D KHWPF V    GKP I+V 
Sbjct: 47  TERLVGDAAKDQAARNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVE 106

Query: 386 YKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISG 565
            KGE + F PEE+S+MVL KMKETAE YLG TV++AVITVPAYFNDSQRQATKDA TI+G
Sbjct: 107 VKGEKRQFNPEEISAMVLQKMKETAETYLGHTVKDAVITVPAYFNDSQRQATKDAATIAG 166

Query: 566 LNVLRIINEPTAACDCLRS*QKGYWENEMYLSLTSAAVLLDVSXLTSEDG 715
           LN +RIINEPTAA        KG  + +  L         DVS L+  +G
Sbjct: 167 LNAIRIINEPTAAA-LAYGLDKGIQDEKNVLIFDLGGGTFDVSILSIAEG 215



 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 18/22 (81%), Positives = 21/22 (95%)
 Frame = +1

Query: 136 GKVEIIANDQGNRTTPSYVAFT 201
           GKVEI+AN +GN+TTPSYVAFT
Sbjct: 24  GKVEILANSEGNKTTPSYVAFT 45



 Score = 35.5 bits (78), Expect = 0.041
 Identities = 13/16 (81%), Positives = 16/16 (100%)
 Frame = +3

Query: 90  IDLGTTYSCVGVFQHG 137
           IDLGTTYSCVG++Q+G
Sbjct: 9   IDLGTTYSCVGIYQNG 24


>AF000264-1|AAC71123.1|  657|Caenorhabditis elegans Heat shock
           protein protein 4 protein.
          Length = 657

 Score =  207 bits (505), Expect = 7e-54
 Identities = 102/171 (59%), Positives = 125/171 (73%)
 Frame = +2

Query: 209 ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAY 388
           ERLIGDAAKNQ+ +NP NTIFDAKRLIGR + + TVQ D+KHWPF++V    KP ++V  
Sbjct: 76  ERLIGDAAKNQLTINPENTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKV 135

Query: 389 KGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGL 568
             E K F PEEVS+MVLTKMK+ AE+YLG  V+NAV+TVPAYFND+Q+QATKDAG+I+GL
Sbjct: 136 GSETKQFTPEEVSAMVLTKMKQIAESYLGHEVKNAVVTVPAYFNDAQKQATKDAGSIAGL 195

Query: 569 NVLRIINEPTAACDCLRS*QKGYWENEMYLSLTSAAVLLDVSXLTSEDGIF 721
           NV+RIINEPTAA       +K    N +   L       DVS LT + G+F
Sbjct: 196 NVVRIINEPTAAAIAYGLDKKDGERNILVFDLGGGT--FDVSLLTIDSGVF 244



 Score = 44.4 bits (100), Expect = 9e-05
 Identities = 19/22 (86%), Positives = 21/22 (95%)
 Frame = +1

Query: 136 GKVEIIANDQGNRTTPSYVAFT 201
           G+VEIIANDQGNR TPSYVAF+
Sbjct: 50  GRVEIIANDQGNRITPSYVAFS 71



 Score = 35.5 bits (78), Expect = 0.041
 Identities = 14/16 (87%), Positives = 16/16 (100%)
 Frame = +3

Query: 90  IDLGTTYSCVGVFQHG 137
           IDLGTTYSCVGVF++G
Sbjct: 35  IDLGTTYSCVGVFKNG 50


>Z81467-1|CAB03871.1|  643|Caenorhabditis elegans Hypothetical
           protein C12C8.1 protein.
          Length = 643

 Score =  204 bits (498), Expect = 5e-53
 Identities = 102/170 (60%), Positives = 124/170 (72%)
 Frame = +2

Query: 206 TERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVA 385
           TERL+GDAAK+Q A NP NT+FDAKRLIGR+F++ TVQ+D+KHWPF V    GKP ++V 
Sbjct: 47  TERLVGDAAKDQAARNPENTVFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVE 106

Query: 386 YKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISG 565
            KGE + F  EE+S+MVL KMKETAEA LG +V++AVITVPAYFNDSQRQATKDA TI+G
Sbjct: 107 VKGEKREFNAEEISAMVLQKMKETAEAVLGHSVRDAVITVPAYFNDSQRQATKDAATIAG 166

Query: 566 LNVLRIINEPTAACDCLRS*QKGYWENEMYLSLTSAAVLLDVSXLTSEDG 715
           LN +RIINEPTAA        KG  + +  L         DVS L+  +G
Sbjct: 167 LNAIRIINEPTAAA-LAYGLDKGITDEKNILIFDLGGGTFDVSILSIAEG 215



 Score = 44.0 bits (99), Expect = 1e-04
 Identities = 18/22 (81%), Positives = 21/22 (95%)
 Frame = +1

Query: 136 GKVEIIANDQGNRTTPSYVAFT 201
           GKVEI+AN +GN+TTPSYVAFT
Sbjct: 24  GKVEILANSEGNKTTPSYVAFT 45



 Score = 35.5 bits (78), Expect = 0.041
 Identities = 13/16 (81%), Positives = 16/16 (100%)
 Frame = +3

Query: 90  IDLGTTYSCVGVFQHG 137
           IDLGTTYSCVG++Q+G
Sbjct: 9   IDLGTTYSCVGIYQNG 24


>U88315-3|AAB42371.1|  657|Caenorhabditis elegans Heat shock protein
           protein 6 protein.
          Length = 657

 Score =  157 bits (380), Expect = 1e-38
 Identities = 79/133 (59%), Positives = 97/133 (72%), Gaps = 1/133 (0%)
 Frame = +2

Query: 209 ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVA 385
           ERL+G  AK Q   N  NT+F  KRLIGR++ED  VQ D+K  P+++V +  G   ++  
Sbjct: 76  ERLVGAPAKRQAVTNSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVEA- 134

Query: 386 YKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISG 565
              + K + P +V + VL KMKETAE+YLG TV NAV+TVPAYFNDSQRQATKDAG ISG
Sbjct: 135 ---QGKVYSPSQVGAFVLMKMKETAESYLGTTVNNAVVTVPAYFNDSQRQATKDAGQISG 191

Query: 566 LNVLRIINEPTAA 604
           LNVLR+INEPTAA
Sbjct: 192 LNVLRVINEPTAA 204



 Score = 30.3 bits (65), Expect = 1.5
 Identities = 17/32 (53%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = +1

Query: 109 TLALVSSSTGKV-EIIANDQGNRTTPSYVAFT 201
           T + VS   GK  ++I N +G RTTPS VAFT
Sbjct: 41  TNSCVSIMEGKTPKVIENAEGVRTTPSTVAFT 72


>X07678-1|CAA30525.1|  487|Caenorhabditis elegans hsp6F protein.
          Length = 487

 Score =  153 bits (372), Expect = 1e-37
 Identities = 78/133 (58%), Positives = 96/133 (72%), Gaps = 1/133 (0%)
 Frame = +2

Query: 209 ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVA 385
           ERL+G  AK Q   N  NT+F  KRLIGR++ED  VQ D+K  P+++V +  G   ++  
Sbjct: 76  ERLVGAPAKRQAVTNSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVEA- 134

Query: 386 YKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISG 565
              + K + P +V + VL KMKETAE+YLG TV N V+TVPAYFNDSQRQATKDAG ISG
Sbjct: 135 ---QGKEYPPSQVGAFVLMKMKETAESYLGTTVNNPVVTVPAYFNDSQRQATKDAGQISG 191

Query: 566 LNVLRIINEPTAA 604
           LNVLR+INEPTAA
Sbjct: 192 LNVLRVINEPTAA 204



 Score = 30.3 bits (65), Expect = 1.5
 Identities = 17/32 (53%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = +1

Query: 109 TLALVSSSTGKV-EIIANDQGNRTTPSYVAFT 201
           T + VS   GK  ++I N +G RTTPS VAFT
Sbjct: 41  TNSCVSIMEGKTPKVIENAEGVRTTPSTVAFT 72


>Z81113-10|CAB54300.1|  607|Caenorhabditis elegans Hypothetical
           protein F11F1.1 protein.
          Length = 607

 Score =  121 bits (292), Expect = 5e-28
 Identities = 63/131 (48%), Positives = 88/131 (67%), Gaps = 1/131 (0%)
 Frame = +2

Query: 215 LIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSD-GGKPKIKVAYK 391
           LIG  AK+ +     N++FD KR+IGR+++D  +Q DM  WPF+V  D  G P +++   
Sbjct: 47  LIGQHAKDVIG-KATNSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKN 105

Query: 392 GEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLN 571
            +   F    VSS++L  +K  AE  LG  V++AVITVPAYFN +QR+AT++A  I+GL 
Sbjct: 106 EKPLKFSAVTVSSLILRCLKYNAERKLGLEVKSAVITVPAYFNATQRRATEEAAEIAGLK 165

Query: 572 VLRIINEPTAA 604
           VLRI+NEPTAA
Sbjct: 166 VLRILNEPTAA 176



 Score = 29.9 bits (64), Expect = 2.0
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +3

Query: 90  IDLGTTYSCVGVFQHG 137
           IDLGTT+SCV  +Q+G
Sbjct: 5   IDLGTTFSCVAYYQNG 20


>Z81059-7|CAB54217.1|  607|Caenorhabditis elegans Hypothetical
           protein F11F1.1 protein.
          Length = 607

 Score =  121 bits (292), Expect = 5e-28
 Identities = 63/131 (48%), Positives = 88/131 (67%), Gaps = 1/131 (0%)
 Frame = +2

Query: 215 LIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSD-GGKPKIKVAYK 391
           LIG  AK+ +     N++FD KR+IGR+++D  +Q DM  WPF+V  D  G P +++   
Sbjct: 47  LIGQHAKDVIG-KATNSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKN 105

Query: 392 GEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLN 571
            +   F    VSS++L  +K  AE  LG  V++AVITVPAYFN +QR+AT++A  I+GL 
Sbjct: 106 EKPLKFSAVTVSSLILRCLKYNAERKLGLEVKSAVITVPAYFNATQRRATEEAAEIAGLK 165

Query: 572 VLRIINEPTAA 604
           VLRI+NEPTAA
Sbjct: 166 VLRILNEPTAA 176



 Score = 29.9 bits (64), Expect = 2.0
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = +3

Query: 90  IDLGTTYSCVGVFQHG 137
           IDLGTT+SCV  +Q+G
Sbjct: 5   IDLGTTFSCVAYYQNG 20


>Z49967-2|CAA90248.2|  450|Caenorhabditis elegans Hypothetical
           protein F54C9.2 protein.
          Length = 450

 Score =  108 bits (259), Expect = 5e-24
 Identities = 65/172 (37%), Positives = 92/172 (53%), Gaps = 3/172 (1%)
 Frame = +2

Query: 215 LIGDAAKNQVAMNPNNTIFDAKRLIGRKFE--DATVQADMKHWPFEVVSDG-GKPKIKVA 385
           LIG  A  Q   NP  TI+DAKR IGR FE  +    +D K +PF++  D  GK   ++ 
Sbjct: 82  LIGTRATEQQEHNPKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIP 141

Query: 386 YKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISG 565
                K  +PEE+ S+++  +K  A  +LG T+   VI+ PA FN+ QR  T  A  I+ 
Sbjct: 142 LDSGTKNVYPEEIGSLIIGYLKSAAAKHLGVTLGQVVISCPAEFNEKQRNFTAKAAEIAE 201

Query: 566 LNVLRIINEPTAACDCLRS*QKGYWENEMYLSLTSAAVLLDVSXLTSEDGIF 721
           + V R+I+EPTAA       +K   EN + + L      LDVS L  + G+F
Sbjct: 202 MEVRRVISEPTAAALAYGLHKKQGVENVVVVDLGGGT--LDVSVLWLQGGVF 251


>L09634-1|AAA27967.1|  776|Caenorhabditis elegans Hypothetical
           protein C30C11.4 protein.
          Length = 776

 Score = 98.7 bits (235), Expect = 4e-21
 Identities = 56/134 (41%), Positives = 78/134 (58%), Gaps = 3/134 (2%)
 Frame = +2

Query: 209 ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVA 385
           +R +G AA+  V  N  NT+ + K LIGRKF D   Q  +   P +VV        ++V+
Sbjct: 45  DRSMGVAARQAVTTNIKNTVINFKHLIGRKFSDPVAQRFIPFIPCKVVKLPNDDIGVQVS 104

Query: 386 YKGEDKTFFPEEVSSMVLTKMKETAEAYLG--KTVQNAVITVPAYFNDSQRQATKDAGTI 559
           Y GE  TF PE+V + +LTK++   E+ L   K V + V+ VP+YF D QR+A   A   
Sbjct: 105 YLGEPHTFTPEQVLAALLTKLRTIVESQLSDVKKVSDCVLAVPSYFTDVQRRAVLSAIQY 164

Query: 560 SGLNVLRIINEPTA 601
           +GLN LRI+NE TA
Sbjct: 165 AGLNSLRIVNETTA 178


>Z67884-4|CAH60753.1|  905|Caenorhabditis elegans Hypothetical
           protein T14G8.3b protein.
          Length = 905

 Score = 70.1 bits (164), Expect = 2e-12
 Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
 Frame = +2

Query: 209 ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVA 385
           ER   +AA    + +P ++      +I RK  D       K +PF     D  +  +   
Sbjct: 55  ERFFAEAAAAMSSSHPQSSYNFLLSMIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFP 114

Query: 386 YKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISG 565
           YK E+K +  E + +M+L   K+  EAY  +TV++ VITVP + N ++R+A   A  I+G
Sbjct: 115 YK-EEK-YNVETLLAMILWNAKKVTEAYADQTVKDVVITVPIFLNQAERRAIASAAEIAG 172

Query: 566 LNVLRIINEPTAA 604
           LN+L+++N+ +AA
Sbjct: 173 LNLLQLLNDGSAA 185


>Z67884-3|CAA91809.2|  921|Caenorhabditis elegans Hypothetical
           protein T14G8.3a protein.
          Length = 921

 Score = 70.1 bits (164), Expect = 2e-12
 Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 1/133 (0%)
 Frame = +2

Query: 209 ERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVA 385
           ER   +AA    + +P ++      +I RK  D       K +PF     D  +  +   
Sbjct: 71  ERFFAEAAAAMSSSHPQSSYNFLLSMIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFP 130

Query: 386 YKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISG 565
           YK E+K +  E + +M+L   K+  EAY  +TV++ VITVP + N ++R+A   A  I+G
Sbjct: 131 YK-EEK-YNVETLLAMILWNAKKVTEAYADQTVKDVVITVPIFLNQAERRAIASAAEIAG 188

Query: 566 LNVLRIINEPTAA 604
           LN+L+++N+ +AA
Sbjct: 189 LNLLQLLNDGSAA 201


>U28940-6|AAA68352.1|  925|Caenorhabditis elegans Hypothetical
           protein T24H7.2 protein.
          Length = 925

 Score = 62.5 bits (145), Expect = 3e-10
 Identities = 38/136 (27%), Positives = 66/136 (48%), Gaps = 1/136 (0%)
 Frame = +2

Query: 200 QXTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIK 379
           Q   R   DAA       P+        L+G+  +  + +   +   F  V D  K    
Sbjct: 66  QDGHRTFADAAIGMQVRYPHLVHGQLNDLVGKSTQHPSFELFKRRNTFFEVDDAPKNASS 125

Query: 380 VAYKGEDKTFFPEEVSSMVLTKMKETAEAYL-GKTVQNAVITVPAYFNDSQRQATKDAGT 556
           + +K   +++  E +++M+L   K+  E Y     +++ VITVP YF  ++R A + A  
Sbjct: 126 INFKLGGESYTVEALTAMILANAKKFTEEYAQAAEIKDVVITVPVYFTPAERLAVERAAQ 185

Query: 557 ISGLNVLRIINEPTAA 604
           ++GL VL++IN+ TAA
Sbjct: 186 MAGLTVLQLINDGTAA 201


>Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical
           protein F54E12.2 protein.
          Length = 1091

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +1

Query: 148 IIANDQGNRTTPSYVAFTXHRASHRRCRQEPGGDE 252
           I+A+D G   T S ++   H+ + RR R+E G D+
Sbjct: 494 ILADDMGLGKTLSMISLIAHQKAARRARREDGNDD 528


>Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical
           protein F54E12.2 protein.
          Length = 1091

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = +1

Query: 148 IIANDQGNRTTPSYVAFTXHRASHRRCRQEPGGDE 252
           I+A+D G   T S ++   H+ + RR R+E G D+
Sbjct: 494 ILADDMGLGKTLSMISLIAHQKAARRARREDGNDD 528


>AF016428-3|AAO26000.3|  445|Caenorhabditis elegans Ground-like (grd
           related) protein18 protein.
          Length = 445

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/22 (50%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
 Frame = -3

Query: 145 PPXPCWKTPTQEYVV-PRSIXY 83
           PP PC++ PTQ Y   P S+ Y
Sbjct: 52  PPMPCYQQPTQNYYTQPPSVIY 73


>Z81136-5|CAB03460.2|  733|Caenorhabditis elegans Hypothetical
           protein W02B8.4 protein.
          Length = 733

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 20/76 (26%), Positives = 38/76 (50%)
 Frame = +2

Query: 263 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 442
           T+  AKR I R  E  T+++D    PF +++      +K A K +D+     +   ++L 
Sbjct: 205 TVRRAKRSIIRNAESYTLKSDFDKSPFSIITKHLTNSVK-ALKKKDRI---SKWQDIILR 260

Query: 443 KMKETAEAYLGKTVQN 490
             KE+++    K ++N
Sbjct: 261 IQKESSQLRKRKEIEN 276


>U61947-14|ABA29341.1|  413|Caenorhabditis elegans Nuclear hormone
           receptor familyprotein 105, isoform b protein.
          Length = 413

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 11/38 (28%), Positives = 17/38 (44%)
 Frame = -3

Query: 745 SPAVDFTSKDTILRCKXGHVQKDRRRGQR*VHFVLPVP 632
           +P    T  DT +R +  H+  +   G   +HF  P P
Sbjct: 140 TPLSTITDMDTDIRTRTAHILGEPANGNEQIHFYSPTP 177


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,009,318
Number of Sequences: 27780
Number of extensions: 386909
Number of successful extensions: 1078
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 973
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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