Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0966
(750 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 290 6e-79
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 290 6e-79
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 290 6e-79
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 290 6e-79
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 129 2e-30
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 116 1e-26
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 77 2e-14
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 66 2e-11
At2g31060.1 68415.m03790 elongation factor family protein contai... 38 0.005
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 31 0.82
At5g46180.1 68418.m05680 ornithine aminotransferase, putative / ... 31 1.1
At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)... 31 1.1
At4g29900.1 68417.m04254 calcium-transporting ATPase, plasma mem... 29 4.4
At2g39560.1 68415.m04853 expressed protein 29 4.4
At1g47840.1 68414.m05325 hexokinase, putative similar to hexokin... 29 4.4
At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containi... 28 5.8
At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein s... 28 5.8
At3g18370.1 68416.m02336 C2 domain-containing protein contains P... 28 5.8
At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5) M... 28 7.6
At5g19490.1 68418.m02322 repressor protein-related similar to re... 28 7.6
At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase fa... 28 7.6
At1g18900.2 68414.m02353 pentatricopeptide (PPR) repeat-containi... 28 7.6
At1g18900.1 68414.m02352 pentatricopeptide (PPR) repeat-containi... 28 7.6
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 290 bits (712), Expect = 6e-79
Identities = 146/238 (61%), Positives = 175/238 (73%)
Frame = +1
Query: 7 TSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEP 186
TSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+
Sbjct: 106 TSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKA 165
Query: 187 RFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADG 366
R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K G
Sbjct: 166 RYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK------------G 213
Query: 367 KCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANI 546
L+EALD I P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP +
Sbjct: 214 PTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGL 273
Query: 547 TTEVKSVEMHHEALQEAVPGDXXXXXXXXXXXXELRSWVMLAGDSKNNPP*GCCRFYS 720
TTEVKSVEMHHE+L EA+PGD +L+ +A +SK++P G F S
Sbjct: 274 TTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRG-YVASNSKDDPAKGAANFTS 330
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +2
Query: 698 KGAADFTAQVIGLNHXG 748
KGAA+FT+QVI +NH G
Sbjct: 323 KGAANFTSQVIIMNHPG 339
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 290 bits (712), Expect = 6e-79
Identities = 146/238 (61%), Positives = 175/238 (73%)
Frame = +1
Query: 7 TSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEP 186
TSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+
Sbjct: 106 TSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKA 165
Query: 187 RFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADG 366
R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K G
Sbjct: 166 RYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK------------G 213
Query: 367 KCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANI 546
L+EALD I P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP +
Sbjct: 214 PTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGL 273
Query: 547 TTEVKSVEMHHEALQEAVPGDXXXXXXXXXXXXELRSWVMLAGDSKNNPP*GCCRFYS 720
TTEVKSVEMHHE+L EA+PGD +L+ +A +SK++P G F S
Sbjct: 274 TTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRG-YVASNSKDDPAKGAANFTS 330
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +2
Query: 698 KGAADFTAQVIGLNHXG 748
KGAA+FT+QVI +NH G
Sbjct: 323 KGAANFTSQVIIMNHPG 339
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 290 bits (712), Expect = 6e-79
Identities = 146/238 (61%), Positives = 175/238 (73%)
Frame = +1
Query: 7 TSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEP 186
TSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+
Sbjct: 106 TSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKA 165
Query: 187 RFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADG 366
R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K G
Sbjct: 166 RYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK------------G 213
Query: 367 KCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANI 546
L+EALD I P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP +
Sbjct: 214 PTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGL 273
Query: 547 TTEVKSVEMHHEALQEAVPGDXXXXXXXXXXXXELRSWVMLAGDSKNNPP*GCCRFYS 720
TTEVKSVEMHHE+L EA+PGD +L+ +A +SK++P G F S
Sbjct: 274 TTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRG-YVASNSKDDPAKGAANFTS 330
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +2
Query: 698 KGAADFTAQVIGLNHXG 748
KGAA+FT+QVI +NH G
Sbjct: 323 KGAANFTSQVIIMNHPG 339
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 290 bits (712), Expect = 6e-79
Identities = 146/238 (61%), Positives = 175/238 (73%)
Frame = +1
Query: 7 TSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEP 186
TSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS+
Sbjct: 106 TSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKA 165
Query: 187 RFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADG 366
R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K G
Sbjct: 166 RYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK------------G 213
Query: 367 KCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPANI 546
L+EALD I P RP+DKPLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V FAP +
Sbjct: 214 PTLLEALDQINEPKRPSDKPLRLPLQDVYKIGGIGTVPVGRVETGMIKPGMVVTFAPTGL 273
Query: 547 TTEVKSVEMHHEALQEAVPGDXXXXXXXXXXXXELRSWVMLAGDSKNNPP*GCCRFYS 720
TTEVKSVEMHHE+L EA+PGD +L+ +A +SK++P G F S
Sbjct: 274 TTEVKSVEMHHESLLEALPGDNVGFNVKNVAVKDLKRG-YVASNSKDDPAKGAANFTS 330
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = +2
Query: 698 KGAADFTAQVIGLNHXG 748
KGAA+FT+QVI +NH G
Sbjct: 323 KGAANFTSQVIIMNHPG 339
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 129 bits (311), Expect = 2e-30
Identities = 78/203 (38%), Positives = 115/203 (56%), Gaps = 3/203 (1%)
Frame = +1
Query: 10 SQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPR 189
SQAD VL+++A GEFE G + GQTREH LA TLGV +LIV VNKMD +S+ R
Sbjct: 201 SQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLIVVVNKMDDPTVNWSKER 260
Query: 190 FEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNMLEPSTK--MPWFKGWQVERKEGKA 360
++EI++++ ++K GYN V F+PISG G NM + + PW W
Sbjct: 261 YDEIEQKMVPFLKASGYNTKKDVVFLPISGLMGKNMDQRMGQEICPW---W--------- 308
Query: 361 DGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPA 540
G E LD+I P R + P R+P+ D +K +GTV +G+VE+G ++ G +V P
Sbjct: 309 SGPSFFEVLDSIEIPPRDPNGPFRMPIIDKFK--DMGTVVMGKVESGSIREGDSLVVMPN 366
Query: 541 NITTEVKSVEMHHEALQEAVPGD 609
+V ++ + ++ A PG+
Sbjct: 367 KEQVKVVAIYCDEDKVKRAGPGE 389
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 116 bits (280), Expect = 1e-26
Identities = 68/203 (33%), Positives = 110/203 (54%), Gaps = 3/203 (1%)
Frame = +1
Query: 10 SQADCAVLIVAAGTGEFEAGISK-NGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEP 186
+QAD A+L++ A G FEAG GQTREHA + GV+Q+IV +NKMD YS+
Sbjct: 339 TQADAAILVIDASVGAFEAGFDNLKGQTREHARVLRGFGVEQVIVAINKMDIV--GYSKE 396
Query: 187 RFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNML-EPSTKMPWFKGWQVERKEGKAD 363
RF+ IK+ V S+++ + +++ ++P+S N++ PS W
Sbjct: 397 RFDLIKQHVGSFLQSCRFKDSSLTWIPLSAMENQNLVAAPSDNR--LSSWY--------Q 446
Query: 364 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPV-GRVETGVLKPGTIVVFAPA 540
G CL++A+D++ P R KPL +P+ D + G V G++E G ++PG+ V+ P+
Sbjct: 447 GPCLLDAVDSVKSPDRDVSKPLLMPICDAVRSTSQGQVSACGKLEAGAVRPGSKVMVMPS 506
Query: 541 NITTEVKSVEMHHEALQEAVPGD 609
++S+E +A A GD
Sbjct: 507 GDQGTIRSLERDSQACTIARAGD 529
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 76.6 bits (180), Expect = 2e-14
Identities = 69/233 (29%), Positives = 105/233 (45%), Gaps = 5/233 (2%)
Frame = +1
Query: 10 SQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPR 189
+Q D A+L+V+ G QT+EH LLA +GV ++V +NK D +
Sbjct: 164 AQMDGAILVVSGADGPMP-------QTKEHILLAKQVGVPDMVVFLNKEDQVD---DAEL 213
Query: 190 FEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGK 369
E ++ EV + +N + PI +E T+ P +V+R + K K
Sbjct: 214 LELVELEVRELLSSYEFNGDDI---PIISGSALLAVETLTENP-----KVKRGDNKWVDK 265
Query: 370 C--LIEALDAILP-PARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVFAPA 540
L++A+D +P P R T+ P L ++DV+ I G GTV GRVE G +K G V
Sbjct: 266 IYELMDAVDDYIPIPQRQTELPFLLAVEDVFSITGRGTVATGRVERGTVKVGETVDLVGL 325
Query: 541 NITTE--VKSVEMHHEALQEAVPGDXXXXXXXXXXXXELRSWVMLAGDSKNNP 693
T V VEM + L EA+ GD +++ ++LA P
Sbjct: 326 RETRSYTVTGVEMFQKILDEALAGDNVGLLLRGIQKADIQRGMVLAKPGSITP 378
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 66.5 bits (155), Expect = 2e-11
Identities = 60/206 (29%), Positives = 91/206 (44%), Gaps = 6/206 (2%)
Frame = +1
Query: 10 SQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPR 189
+Q D +L+V+ G QT+EH LLA +GV L+ +NK+D + P
Sbjct: 152 AQMDGGILVVSGPDGPMP-------QTKEHILLARQVGVPSLVCFLNKVDVVDDPELLEL 204
Query: 190 FEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGK 369
E +E+ S+ K G + + +S G N + G+
Sbjct: 205 VEMELRELLSFYKFPGDDIPIIRGSALSALQGTN-----------------DEIGRQAIL 247
Query: 370 CLIEALDAILP-PARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIVVF----- 531
L++A+D +P P R DKP +P++DV+ I G GTV GR+E GV+K G V
Sbjct: 248 KLMDAVDEYIPDPVRVLDKPFLMPIEDVFSIQGRGTVATGRIEQGVIKVGEEVEILGLRE 307
Query: 532 APANITTEVKSVEMHHEALQEAVPGD 609
+ + V VEM + L GD
Sbjct: 308 GGVPLKSTVTGVEMFKKILDNGQAGD 333
>At2g31060.1 68415.m03790 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain, PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 527
Score = 38.3 bits (85), Expect = 0.005
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 4/168 (2%)
Frame = +1
Query: 25 AVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIK 204
A+L+V AG G QT+ A G++ +++ +NK+D P +E R +E++
Sbjct: 5 AILVVDAGEGPL-------AQTKFVLAKALKYGLRPILL-LNKVD--RPSVTEERCDEVE 54
Query: 205 KEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEA 384
V G + F P+ L S K W K+ D K + +
Sbjct: 55 SLVFDLFANCGATEEQLDF-PV--------LYASAKEGWASSTYT--KDPPVDAKNMADL 103
Query: 385 LDAIL----PPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 516
LDA++ PP D+P + + + K +G + GRV +GV++ G
Sbjct: 104 LDAVVRHVQPPKANLDEPFLMLVSMMEKDFYLGRILTGRVTSGVVRVG 151
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 31.1 bits (67), Expect = 0.82
Identities = 25/84 (29%), Positives = 36/84 (42%)
Frame = +1
Query: 337 VERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 516
V K G L ++ I PP ++ PLR+ L D + G + V G+L G
Sbjct: 225 VSAKTGLGLEHVLPAVIERIPPPPGISESPLRMLLFDSFFNEYKGVICYVSVVDGMLSKG 284
Query: 517 TIVVFAPANITTEVKSVEMHHEAL 588
V FA + + EV V + H L
Sbjct: 285 DKVSFAASGQSYEVLDVGIMHPEL 308
>At5g46180.1 68418.m05680 ornithine aminotransferase, putative /
ornithine--oxo-acid aminotransferase, putative similar
to SP|Q92413 Ornithine aminotransferase (EC 2.6.1.13)
(Ornithine--oxo-acid aminotransferase) [Aspergillus
nidulans] {Emericella nidulans}; contains Pfam profile
PF00202: aminotransferase, class III
Length = 475
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +1
Query: 115 TLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISG 276
T GV++ G+ + +S PP S R E++ E S++ Y+P V F +G
Sbjct: 18 TAGVRRSYGGLPQSNSKSPPSSSQRLMELESEFSAH----NYHPVPVVFSRANG 67
>At2g46830.1 68415.m05843 myb-related transcription factor (CCA1)
identical to myb-related transcription factor (CCA1)
GI:4090569 from [Arabidopsis thaliana]
Length = 608
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +1
Query: 346 KEGKADGKCLIEALDAILPPARPTDKP 426
KE +A G + +ALD +PP RP KP
Sbjct: 74 KEAEAKGVAMGQALDIAIPPPRPKRKP 100
>At4g29900.1 68417.m04254 calcium-transporting ATPase, plasma
membrane-type, putative / Ca2+-ATPase, putative (ACA10)
identical to SP|Q9SZR1 Potential calcium-transporting
ATPase 10, plasma membrane-type (EC 3.6.3.8)
(Ca(2+)-ATPase isoform 10) {Arabidopsis thaliana};
similar to SP|Q9LF79 Calcium-transporting ATPase 8,
plasma membrane-type (EC 3.6.3.8) (Ca(2+)-ATPase isoform
8) {Arabidopsis thaliana}
Length = 1069
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -2
Query: 602 GTASWRASWCISTDLTSVVMLAGAKTTMVPGFNT 501
G + WR W S DLT ++++ A ++ G T
Sbjct: 178 GRSFWRFVWEASQDLTLIILIVAAVASLALGIKT 211
>At2g39560.1 68415.m04853 expressed protein
Length = 233
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 521 MVPGFNTPVSTLPTGTVPIPPILYTSCRGRRRGLS 417
+ P + TP ++ T P+ P+L SC GR+ +S
Sbjct: 144 ITPPYLTPRASPSLFTPPLTPLLMESCNGRKEEIS 178
>At1g47840.1 68414.m05325 hexokinase, putative similar to hexokinase
1 [Arabidopsis thaliana] Swiss-Prot:Q42525
Length = 493
Score = 28.7 bits (61), Expect = 4.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 295 LEPSTKMPWFKGWQVERKEGKADGKCLIEALDA 393
++ T W KG++V EGK CL EA++A
Sbjct: 189 IDSGTLSKWTKGFKVSGMEGKNVVACLNEAMEA 221
>At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 747
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 231 DWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGM 332
DW+ C AHF RR +GAF A G+
Sbjct: 687 DWVNCGSCGEWAHFGCDRRPGLGAFKDYAKTDGL 720
>At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein
similar to 1,4-alpha-glucan branching enzyme [Solanum
tuberosum] GI:1621012, 1,4-alpha-glucan branching enzyme
(EC 2.4.1.18) from [Homo sapiens] SP|Q04446, {Solanum
tuberosum} SP|P30924; contains Pfam profiles: PF00128
Alpha amylase catalytic domain, PF02922 Isoamylase
N-terminal domain
Length = 777
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +1
Query: 178 SEPR---FEEIKKEVSSYIKKIGYNPAAVAFVP 267
SEP+ FEE K+V ++K+ GYN + VP
Sbjct: 257 SEPKVSTFEEFTKKVLPHVKRAGYNAIQLIGVP 289
>At3g18370.1 68416.m02336 C2 domain-containing protein contains Pfam
profile: PF00168 C2 domain
Length = 815
Score = 28.3 bits (60), Expect = 5.8
Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Frame = +2
Query: 203 RRKYPHTSRRLATTQLLSLS---CPFLDGTETTCWSLQPKCLGSR-DGRWSVRKAKLTEN 370
+R SR + QLL S CP L G TCWS + R D W +
Sbjct: 127 KRLRQRRSRLIENIQLLEFSLGSCPPLLGLHGTCWSKSGEQKIMRLDFNWDTTDLSILLQ 186
Query: 371 ASLKLSMP 394
A KLSMP
Sbjct: 187 A--KLSMP 192
>At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5)
Monovalent cation:proton antiporter family 2 (CPA2
family) member, PMID:11500563; related to
glutathione-regulated potassium-efflux system protein
[Escherichia coli] GP|606284|gb|AAA58147
Length = 568
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 184 PRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNM 294
PRF ++ ++SS ++ Y AAVAF +S W D +
Sbjct: 354 PRFLKLMIQLSSQTNEL-YQLAAVAFCLLSAWCSDKL 389
>At5g19490.1 68418.m02322 repressor protein-related similar to
repressor protein [Oryza sativa] GI:18481624
Length = 236
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 476 TVPIPPILYTSCRGRRRGLSVGRAGGRMASRASMR 372
T + + +TSC RRG GR+ GR S S++
Sbjct: 92 TTQMHEVKHTSCGRGRRGRGRGRSSGRTGSGLSLK 126
>At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase
family protein similar to Potential
phospholipid-transporting ATPase (EC 3.6.3.1) from Homo
sapiens [SP|Q9Y2Q0, SP|O43520], Mus musculus [SP|P98200,
SP|P70704], {Bos taurus} SP|Q29449; contains InterPro
accession IPR005834: Haloacid dehalogenase-like
hydrolase
Length = 1184
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +1
Query: 61 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 219
E+G +TR+H G++ LI+ ++D E R E K VS+
Sbjct: 629 ESGRKYEKETRDHVNEYADAGLRTLILAYRELDENEYEVFTERISEAKNSVSA 681
>At1g18900.2 68414.m02353 pentatricopeptide (PPR) repeat-containing
protein low similarity to 67kD chloroplastic RNA-binding
protein, P67 [Arabidopsis thaliana] GI:9755842; contains
Pfam profile PF01535: PPR repeat
Length = 860
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +2
Query: 269 FLDGTETTCWSLQPKCLGSRDGRWSVRKAKLTENASLKLSMPSCHLPAPLTSPCVFPCKT 448
FL+G+ T+ C+ S D ++ +L + A PS LP P C+ P +
Sbjct: 18 FLNGSRTSVTDGN-SCVYSDDENCVSKRQQLRKEAGQTEKRPSSILPKPSVVGCILPGEV 76
Query: 449 YTKSVV 466
TK VV
Sbjct: 77 -TKPVV 81
>At1g18900.1 68414.m02352 pentatricopeptide (PPR) repeat-containing
protein low similarity to 67kD chloroplastic RNA-binding
protein, P67 [Arabidopsis thaliana] GI:9755842; contains
Pfam profile PF01535: PPR repeat
Length = 860
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/66 (30%), Positives = 30/66 (45%)
Frame = +2
Query: 269 FLDGTETTCWSLQPKCLGSRDGRWSVRKAKLTENASLKLSMPSCHLPAPLTSPCVFPCKT 448
FL+G+ T+ C+ S D ++ +L + A PS LP P C+ P +
Sbjct: 18 FLNGSRTSVTDGN-SCVYSDDENCVSKRQQLRKEAGQTEKRPSSILPKPSVVGCILPGEV 76
Query: 449 YTKSVV 466
TK VV
Sbjct: 77 -TKPVV 81
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,734,833
Number of Sequences: 28952
Number of extensions: 401430
Number of successful extensions: 1349
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1338
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1663169840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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