Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0965
         (750 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4RZJ1 Cluster: Chromosome undetermined SCAF14820, whol...    34   3.3  
UniRef50_A7ALZ3 Cluster: Putative uncharacterized protein; n=4; ...    34   3.3  
UniRef50_A6Q1X0 Cluster: Putative uncharacterized protein; n=1; ...    33   7.5  
UniRef50_Q8WQW9 Cluster: Serine proteinase inhibitor serpin-3; n...    33   9.9  
UniRef50_A2DJ08 Cluster: Putative uncharacterized protein; n=1; ...    33   9.9  

>UniRef50_Q4RZJ1 Cluster: Chromosome undetermined SCAF14820, whole
           genome shotgun sequence; n=2; Tetraodontidae|Rep:
           Chromosome undetermined SCAF14820, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 336

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 20/64 (31%), Positives = 31/64 (48%)
 Frame = -3

Query: 292 DLRGYRETSNKKKTTYPVYLILHALMFIIILSVVRTKQSKTIVKLKKMKSKLFHAIPKSL 113
           DL+G     NK      V+  L  L   ++ SV + K      +LKK++SKL H    S+
Sbjct: 253 DLKGKIVQPNKSDLVKCVFFFLLLLFVELLFSVFKAKSEGQTEELKKIQSKLEHQSQTSV 312

Query: 112 QHIN 101
           Q ++
Sbjct: 313 QELS 316


>UniRef50_A7ALZ3 Cluster: Putative uncharacterized protein; n=4;
           Babesia bovis|Rep: Putative uncharacterized protein -
           Babesia bovis
          Length = 485

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
 Frame = -3

Query: 379 FLHTYEILSIN*TFQIVSEYKSFLMAKR*DLRGYRETSNKKKTTYPVYLILHALMFI-II 203
           F H Y I S+  TFQ +S    + +A++ D++  ++    K+  Y +YL+L   + I I+
Sbjct: 271 FEHRYPIQSLCTTFQAISGISIWCLAEKADMK--KKWEGNKRYYYLLYLLLIPYLGIGIM 328

Query: 202 LSVVRTKQSKTIVKLKKMK 146
             V+      T+ KL  MK
Sbjct: 329 FIVIMHYPLSTVAKLVHMK 347


>UniRef50_A6Q1X0 Cluster: Putative uncharacterized protein; n=1;
           Nitratiruptor sp. SB155-2|Rep: Putative uncharacterized
           protein - Nitratiruptor sp. (strain SB155-2)
          Length = 731

 Score = 33.1 bits (72), Expect = 7.5
 Identities = 19/68 (27%), Positives = 33/68 (48%)
 Frame = +2

Query: 323 FTNDLECLINRKNLISV*KITFEQLSSFPINLSYGSVPVRSAILSGGRHNGKKALSGRGL 502
           F ++ + + +    + + K+  E ++ + I   Y S P   AI+     N KK L  +GL
Sbjct: 75  FVHEADLIYSFLKEVHLEKVDLETIAQYDI---YASYPEHLAIIQAIYKNYKKLLDAKGL 131

Query: 503 SSPLILED 526
             P+ LED
Sbjct: 132 VDPITLED 139


>UniRef50_Q8WQW9 Cluster: Serine proteinase inhibitor serpin-3;
           n=13; Ixodidae|Rep: Serine proteinase inhibitor serpin-3
           - Rhipicephalus appendiculatus (Brown ear tick)
          Length = 398

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 18/49 (36%), Positives = 23/49 (46%)
 Frame = +2

Query: 392 QLSSFPINLSYGSVPVRSAILSGGRHNGKKALSGRGLSSPLILEDTF*K 538
           QL  F ++LSYG VP   AI       G    SG   + PL++ D   K
Sbjct: 288 QLPKFDMSLSYGLVPAMKAIGLNSVFGGSADFSGISEAVPLVISDVLHK 336


>UniRef50_A2DJ08 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 688

 Score = 32.7 bits (71), Expect = 9.9
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
 Frame = -1

Query: 507 EDRPLPDKAFFPLWRPPDNIADRTGTLPYERLIGKLDNCS---NVIFYTLMRFFRLIKHS 337
           E  PL +  F  LWR     AD+    P+E L+ K D  +   +++ YTL +    ++H 
Sbjct: 375 EKEPLVNPKFDTLWREIQTHADQANIEPFEFLMSKRDIYNFPHDLLEYTLKKSIEALEHD 434

Query: 336 KSL 328
            +L
Sbjct: 435 ATL 437


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 664,226,254
Number of Sequences: 1657284
Number of extensions: 13062824
Number of successful extensions: 27300
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26467
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27292
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61734884250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)