BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0965 (750 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AF172329-1|AAF02618.1| 3579|Drosophila melanogaster starry night... 32 0.96 AE013599-1158|AAF58763.4| 3574|Drosophila melanogaster CG11895-P... 32 0.96 AB028498-1|BAA84069.1| 3575|Drosophila melanogaster Flamingo pro... 32 0.96 >AF172329-1|AAF02618.1| 3579|Drosophila melanogaster starry night protein protein. Length = 3579 Score = 31.9 bits (69), Expect = 0.96 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 4/50 (8%) Frame = -2 Query: 239 LPNITCLNVHHNLIRSPD*TIENNRQTKEDEIETI----SRYPEKFATYK 102 L + + L HHN I P +EN R +E +++ YP+K+ +YK Sbjct: 3309 LTDTSYLQQHHNKINMPPSILENIRDAREGYEDSLYGRRGEYPDKYGSYK 3358 >AE013599-1158|AAF58763.4| 3574|Drosophila melanogaster CG11895-PA protein. Length = 3574 Score = 31.9 bits (69), Expect = 0.96 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 4/50 (8%) Frame = -2 Query: 239 LPNITCLNVHHNLIRSPD*TIENNRQTKEDEIETI----SRYPEKFATYK 102 L + + L HHN I P +EN R +E +++ YP+K+ +YK Sbjct: 3309 LTDTSYLQQHHNKINMPPSILENIRDAREGYEDSLYGRRGEYPDKYGSYK 3358 >AB028498-1|BAA84069.1| 3575|Drosophila melanogaster Flamingo protein. Length = 3575 Score = 31.9 bits (69), Expect = 0.96 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 4/50 (8%) Frame = -2 Query: 239 LPNITCLNVHHNLIRSPD*TIENNRQTKEDEIETI----SRYPEKFATYK 102 L + + L HHN I P +EN R +E +++ YP+K+ +YK Sbjct: 3310 LTDTSYLQQHHNKINMPPSILENIRDAREGYEDSLYGRRGEYPDKYGSYK 3359 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 29,133,169 Number of Sequences: 53049 Number of extensions: 578956 Number of successful extensions: 1218 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1208 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1218 length of database: 24,988,368 effective HSP length: 83 effective length of database: 20,585,301 effective search space used: 3417159966 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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