Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0964
         (769 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    24   1.5  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   2.0  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   2.7  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   4.7  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 15/66 (22%), Positives = 28/66 (42%)
 Frame = +1

Query: 55  NFYPPFSIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGF 234
           +F P  S+  + +  +  D + K+ V N G N        +  ++    N W+ RN    
Sbjct: 463 DFQPRGSVFVRFTHLQNQDFTYKITVNNSGNNRMGTCRIFLAPQFDERGNPWLFRNQKDM 522

Query: 235 AFVEFE 252
            F+E +
Sbjct: 523 -FIELD 527


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
 Frame = +2

Query: 515 WRSYADFXRTM*KTY-SFKR 571
           WR Y DF R   +TY S KR
Sbjct: 203 WRGYEDFRRDFLRTYWSAKR 222


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
 Frame = -3

Query: 227 GGFRATHTLRMLPYLENIFSISYLD--ALVPKLPTYTLQ 117
           G F+A + L  L  L N+ S  Y D  AL P L    L+
Sbjct: 206 GAFKAENLLVTLTVLPNVNSTVYYDPRALSPNLEFVVLE 244


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 397 SMIGGGDYDCVTC 359
           S++  G+Y CVTC
Sbjct: 864 SIVSLGEYKCVTC 876


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,864
Number of Sequences: 336
Number of extensions: 2802
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)