BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0964 (769 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.) 106 2e-23 SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) 105 4e-23 SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23) 105 5e-23 SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) 78 9e-15 SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) 62 5e-10 SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35) 55 7e-08 SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 7e-07 SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) 50 2e-06 SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 5e-06 SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06 SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05 SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15) 45 6e-05 SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) 45 8e-05 SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04 SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04 SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) 44 2e-04 SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) 43 3e-04 SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04 SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) 42 7e-04 SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) 40 0.002 SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002 SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11) 39 0.004 SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005 SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007 SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009 SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16) 38 0.012 SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.012 SB_16504| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.021 SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.027 SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) 36 0.036 SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.048 SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.048 SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) 35 0.063 SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) 35 0.063 SB_32274| Best HMM Match : RRM_1 (HMM E-Value=0.0026) 34 0.11 SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) 34 0.15 SB_46575| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15 SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) 34 0.15 SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) 33 0.25 SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25 SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25 SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15) 32 0.44 SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13) 31 0.77 SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77 SB_34470| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.77 SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0 SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) 31 1.0 SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) 31 1.4 SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33) 31 1.4 SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035) 30 1.8 SB_13046| Best HMM Match : La (HMM E-Value=5e-23) 30 1.8 SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) 30 2.4 SB_34115| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 3.1 SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1 SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1 SB_46001| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1 SB_14110| Best HMM Match : DUF858 (HMM E-Value=2) 29 4.1 SB_22450| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2 SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) 28 9.5 >SB_11683| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 204 Score = 106 bits (254), Expect = 2e-23 Identities = 47/73 (64%), Positives = 57/73 (78%) Frame = +1 Query: 121 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTR 300 +VY+GN+G NASK EIE+ F +G +R+VWVARNPPGFAF FED RDAED+VR LDG Sbjct: 3 RVYIGNIGDNASKREIEREFETFGPLRDVWVARNPPGFAFCVFEDRRDAEDAVRELDGRY 62 Query: 301 CCGTRIRVEMSNG 339 CG R RVE++ G Sbjct: 63 ICGQRARVELAKG 75 >SB_11682| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 184 Score = 105 bits (252), Expect = 4e-23 Identities = 47/73 (64%), Positives = 57/73 (78%) Frame = +1 Query: 121 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTR 300 KVY+G+LG NASK EIE F YG +++VWVARNPPGFAF F+D RDAED+VR LDG Sbjct: 33 KVYIGSLGDNASKREIENEFGYYGPLKDVWVARNPPGFAFCIFDDRRDAEDAVRELDGRY 92 Query: 301 CCGTRIRVEMSNG 339 CG R+RVE++ G Sbjct: 93 ICGQRVRVELAKG 105 >SB_59562| Best HMM Match : RRM_1 (HMM E-Value=6.1e-23) Length = 201 Score = 105 bits (251), Expect = 5e-23 Identities = 46/75 (61%), Positives = 56/75 (74%) Frame = +1 Query: 112 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLD 291 ++ K+YVGNLG NA E+E+ F K+G + VWVARNPPGFAFVE+ED RDAE++VR LD Sbjct: 2 MTTKLYVGNLGRNADSSELERAFEKFGRLSKVWVARNPPGFAFVEYEDYRDAEEAVRELD 61 Query: 292 GTRCCGTRIRVEMSN 336 G C IRVE SN Sbjct: 62 GANVCDRTIRVEFSN 76 >SB_40573| Best HMM Match : RRM_1 (HMM E-Value=1.8e-39) Length = 507 Score = 77.8 bits (183), Expect = 9e-15 Identities = 40/77 (51%), Positives = 50/77 (64%), Gaps = 3/77 (3%) Frame = +1 Query: 118 CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP---PGFAFVEFEDPRDAEDSVRGL 288 C+VYVGNL + + ++ IF KYG+I +V + P FAFVEFEDPRDAED+V+G Sbjct: 261 CRVYVGNLPQDVREKDLHDIFYKYGHIADVDLKNRRGAGPPFAFVEFEDPRDAEDAVKGR 320 Query: 289 DGTRCCGTRIRVEMSNG 339 DG G RIRVE G Sbjct: 321 DGHEFDGYRIRVEFPRG 337 >SB_41412| Best HMM Match : RRM_1 (HMM E-Value=2.9e-35) Length = 1118 Score = 62.1 bits (144), Expect = 5e-10 Identities = 29/76 (38%), Positives = 46/76 (60%) Frame = +1 Query: 112 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLD 291 ++C+VY+G L ++ ++ + F YG +R++ + N + FVEFED RDA+D+V + Sbjct: 1 MNCRVYLGRLPYGTTEDDVRRFFRSYGRLRDINLKNN---YGFVEFEDDRDADDAVYECN 57 Query: 292 GTRCCGTRIRVEMSNG 339 G G RI VE S G Sbjct: 58 GKEMLGERILVEHSRG 73 Score = 30.3 bits (65), Expect = 1.8 Identities = 16/68 (23%), Positives = 33/68 (48%) Frame = +1 Query: 121 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTR 300 ++ + NL + S +++ + G++ + G +EF RD + +++ LDG Sbjct: 98 RMTIENLSSRVSWQDLKDFCRQVGDVTYGDAHKQRQGEGVIEFSCKRDLKRALKKLDGEE 157 Query: 301 CCGTRIRV 324 G RIR+ Sbjct: 158 LNGKRIRL 165 >SB_44114| Best HMM Match : RRM_1 (HMM E-Value=9.9e-35) Length = 929 Score = 54.8 bits (126), Expect = 7e-08 Identities = 27/59 (45%), Positives = 37/59 (62%) Frame = +1 Query: 163 EIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 339 ++EK YG IR++ + R G+ FVEF+D RDAED+V L+G G R+ VE S G Sbjct: 704 DVEKFLRGYGKIRDISLKR---GYGFVEFDDHRDAEDAVHDLNGRDLIGERVVVEFSKG 759 Score = 40.7 bits (91), Expect = 0.001 Identities = 23/67 (34%), Positives = 31/67 (46%) Frame = +1 Query: 124 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRC 303 V V NL + S +++ F KYG + + G VEFE D ++ LD T Sbjct: 800 VIVENLSSRTSWQDLKDYFRKYGKVTYADAHKKRIGEGVVEFESKDDLNTAIEKLDDTEL 859 Query: 304 CGTRIRV 324 G RIRV Sbjct: 860 GGRRIRV 866 >SB_39475| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 333 Score = 51.6 bits (118), Expect = 7e-07 Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 4/75 (5%) Frame = +1 Query: 124 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN----PPGFAFVEFEDPRDAEDSVRGLD 291 ++V NL +A + EIE++FSK+G ++ V + N P G+ +VE+E A +V LD Sbjct: 173 LFVSNLPFDAKESEIEELFSKHGVVKQVRLVTNRAGKPKGYGYVEYEQESSASTAVLTLD 232 Query: 292 GTRCCGTRIRVEMSN 336 T G I V +SN Sbjct: 233 KTEVKGRTISVALSN 247 >SB_3033| Best HMM Match : RRM_1 (HMM E-Value=2.3e-20) Length = 1313 Score = 50.4 bits (115), Expect = 2e-06 Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 5/74 (6%) Frame = +1 Query: 121 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPP-----GFAFVEFEDPRDAEDSVRG 285 K+YV +L N +K +++IFS YG ++ V + + GFA+VE+ DP + E +++ Sbjct: 1158 KLYVAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKALKH 1217 Query: 286 LDGTRCCGTRIRVE 327 +DG + G I V+ Sbjct: 1218 MDGGQIDGQEIAVQ 1231 >SB_28089| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 254 Score = 48.8 bits (111), Expect = 5e-06 Identities = 25/67 (37%), Positives = 37/67 (55%) Frame = +1 Query: 115 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDG 294 S +VY G L + + ++EK YG +R + + G+ FVEF+D RDA+D V L+G Sbjct: 4 STRVYFGRLPRDCRERDLEKFVRGYGRVREISMKL---GYGFVEFDDYRDADDCVYDLNG 60 Query: 295 TRCCGTR 315 G R Sbjct: 61 RNLLGER 67 Score = 30.3 bits (65), Expect = 1.8 Identities = 15/59 (25%), Positives = 29/59 (49%) Frame = +1 Query: 163 EIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 339 ++++ K G + + G VEF D + +++ LD T G RIR+++ +G Sbjct: 127 DLKEYMGKVGEVTFADAHKRRQGEGVVEFATKDDMKTALKKLDDTEFFGKRIRLKIKDG 185 >SB_23532| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 364 Score = 48.0 bits (109), Expect = 8e-06 Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 9/93 (9%) Frame = +1 Query: 82 TKMSRYREWDLS----CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWV-----ARNPPGF 234 +++ +Y +DL CK Y+GNL ++ +++ FS+Y ++ +V V + P GF Sbjct: 214 SRLLKYSYFDLKMGEECKCYIGNLDFKVNEADLQDRFSRY-DVVDVQVISDRETQRPRGF 272 Query: 235 AFVEFEDPRDAEDSVRGLDGTRCCGTRIRVEMS 333 AFV F ++ ED++ LDG G ++V + Sbjct: 273 AFVTFGSKKNMEDAINELDGQEFDGRSMKVNQA 305 >SB_51896| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 179 Score = 45.6 bits (103), Expect = 4e-05 Identities = 22/69 (31%), Positives = 39/69 (56%) Frame = +1 Query: 121 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTR 300 +++VG L ++E +F YG + + + F+E+EDPRDAE+++R + + Sbjct: 7 QLFVGRLSKETKLRDLENVFYLYGKLLRCDLKT---AYGFIEYEDPRDAEEAMRRENNRK 63 Query: 301 CCGTRIRVE 327 G+RI VE Sbjct: 64 LFGSRIVVE 72 >SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15) Length = 876 Score = 45.2 bits (102), Expect = 6e-05 Identities = 23/74 (31%), Positives = 44/74 (59%), Gaps = 1/74 (1%) Frame = +1 Query: 118 CKVYVGNLGTNA-SKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDG 294 C++++GNL T+ ++ ++E+IFS++G + + N F FV+FE + A+++V G Sbjct: 46 CRIFIGNLATDKIARQDLEEIFSRHGKVLGCSLHAN---FGFVQFETEKGADEAVAKEHG 102 Query: 295 TRCCGTRIRVEMSN 336 G +I V + N Sbjct: 103 RIINGKKIDVRIVN 116 >SB_2700| Best HMM Match : RRM_1 (HMM E-Value=0) Length = 593 Score = 44.8 bits (101), Expect = 8e-05 Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 5/89 (5%) Frame = +1 Query: 73 SIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP-----PGFA 237 +++T + R L C+VYVG++ + I F +G I + ++ +P GFA Sbjct: 87 ALQTAAQKQRALALMCRVYVGSINFELREEHIRTAFHPFGPINKIDLSWDPLNMKHKGFA 146 Query: 238 FVEFEDPRDAEDSVRGLDGTRCCGTRIRV 324 FVE++ P A+ ++ ++G G I+V Sbjct: 147 FVEYDLPEAAQLALEQMNGVLLGGRNIKV 175 >SB_43251| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 204 Score = 44.4 bits (100), Expect = 1e-04 Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 5/70 (7%) Frame = +1 Query: 103 EWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRDA 267 E D + V NL + +++++F KYG++ ++++ R+ GFAFV F + RDA Sbjct: 11 EIDGMTSLKVDNLTYRTTVEDLKQVFKKYGDLGDIYIPRDRNTHESRGFAFVRFYEKRDA 70 Query: 268 EDSVRGLDGT 297 ED++ +D T Sbjct: 71 EDAMDCMDAT 80 >SB_7937| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 618 Score = 44.0 bits (99), Expect = 1e-04 Identities = 23/78 (29%), Positives = 43/78 (55%) Frame = +1 Query: 100 REWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSV 279 R++ C+++VGNL + + E++++F KYG + V++ + GF F+ + AE + Sbjct: 47 RKFTGRCRLFVGNL-IDCDEEEMKEMFKKYGEVAEVFINKEK-GFGFIRLDTRLHAEAAK 104 Query: 280 RGLDGTRCCGTRIRVEMS 333 GLD G +RV + Sbjct: 105 AGLDMATRKGRTLRVRFA 122 >SB_41866| Best HMM Match : RRM_1 (HMM E-Value=0) Length = 718 Score = 43.6 bits (98), Expect = 2e-04 Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 4/69 (5%) Frame = +1 Query: 124 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP----PGFAFVEFEDPRDAEDSVRGLD 291 VYV N G + ++++I ++ G I ++ V +P GF FV FE P +AE++V L+ Sbjct: 111 VYVKNFGDDMDDEQMKEICAEAGKIVSLKVMTDPEGKSKGFGFVSFETPEEAEEAVNVLN 170 Query: 292 GTRCCGTRI 318 G G R+ Sbjct: 171 GKEIGGRRL 179 >SB_47990| Best HMM Match : RRM_1 (HMM E-Value=7.8e-28) Length = 440 Score = 42.7 bits (96), Expect = 3e-04 Identities = 22/72 (30%), Positives = 41/72 (56%) Frame = +1 Query: 112 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLD 291 +S KVY G L A++ ++E + +G +R V G+A+V F++ +DA+ +V L+ Sbjct: 1 MSGKVYCGRLPATATEKDLENLVKVFGKVREVDFKE---GYAYVVFKENKDADRAVAALN 57 Query: 292 GTRCCGTRIRVE 327 + G +I +E Sbjct: 58 NSEFHGAKILME 69 Score = 37.1 bits (82), Expect = 0.016 Identities = 21/68 (30%), Positives = 31/68 (45%) Frame = +1 Query: 121 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTR 300 +V V NL T A E+++ + G + R PG VEF D + ++ LD Sbjct: 103 RVIVENLSTRAKWLELKEFMNNAGEVCYADTHRRRPGEGVVEFTTEEDMKRAIASLDKCE 162 Query: 301 CCGTRIRV 324 G RIR+ Sbjct: 163 FYGKRIRL 170 >SB_1585| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 721 Score = 41.9 bits (94), Expect = 5e-04 Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 5/73 (6%) Frame = +1 Query: 124 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP-----PGFAFVEFEDPRDAEDSVRGL 288 ++V N+ A + +I ++FS YG I+N+ V + G+A VE+E ++A+ ++ L Sbjct: 295 LFVTNIHEEAQEDDIHELFSDYGEIKNLHVNLDRRTGFIKGYALVEYETFKEAQSALEAL 354 Query: 289 DGTRCCGTRIRVE 327 +G G I V+ Sbjct: 355 NGAEMLGQNISVD 367 >SB_46050| Best HMM Match : RRM_1 (HMM E-Value=1.7e-33) Length = 392 Score = 41.5 bits (93), Expect = 7e-04 Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 5/73 (6%) Frame = +1 Query: 124 VYVGNLGTNASKYEIEKIFSKYG---NIRNVW--VARNPPGFAFVEFEDPRDAEDSVRGL 288 V+VGN+ AS+ ++++IFS+ G + R V+ P G+ F E++D A ++R L Sbjct: 27 VFVGNIPYEASEEQLKEIFSEVGPVISFRLVFDRETGKPKGYGFCEYKDQETALSAMRNL 86 Query: 289 DGTRCCGTRIRVE 327 +G G +RV+ Sbjct: 87 NGYELNGRALRVD 99 >SB_8450| Best HMM Match : RRM_1 (HMM E-Value=1.7e-36) Length = 328 Score = 39.9 bits (89), Expect = 0.002 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 5/77 (6%) Frame = +1 Query: 55 NFYPPFSIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN---- 222 N Y S+ + +R + D K++VG L +K +++ FSKYG + V + + Sbjct: 8 NGYIGTSLDSNKTRMTKDDDIGKLFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTG 67 Query: 223 -PPGFAFVEFEDPRDAE 270 P GFAFV+F+ +A+ Sbjct: 68 RPRGFAFVQFKHQSEAD 84 >SB_2543| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 215 Score = 39.9 bits (89), Expect = 0.002 Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 5/71 (7%) Frame = +1 Query: 124 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPP-----GFAFVEFEDPRDAEDSVRGL 288 VYVGNL + + ++ K+F +YG + V + R+ G AF+ F D + A+++V + Sbjct: 12 VYVGNLPYSLTNSDLHKVFERYGKVVKVTILRDKETRESRGVAFILFIDRQSAQNAVAAV 71 Query: 289 DGTRCCGTRIR 321 + + G I+ Sbjct: 72 NKKQMFGRTIK 82 >SB_11106| Best HMM Match : RRM_1 (HMM E-Value=1.8e-11) Length = 67 Score = 39.1 bits (87), Expect = 0.004 Identities = 21/66 (31%), Positives = 35/66 (53%) Frame = +1 Query: 112 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLD 291 +S +VY+G L + +++K F YG + + G+ FVEF+ DAED+V + Sbjct: 1 MSNRVYLGRLPYGTREDDVKKFFYTYGRFKIREIILKD-GYGFVEFDYSDDAEDAVYECN 59 Query: 292 GTRCCG 309 G + G Sbjct: 60 GKKMLG 65 >SB_46435| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 558 Score = 38.7 bits (86), Expect = 0.005 Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 8/65 (12%) Frame = +1 Query: 121 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN--------PPGFAFVEFEDPRDAEDS 276 K+++GNL S++ I KI ++G I + + P G+ FVEF+ DA + Sbjct: 388 KLWIGNLDKRLSEFNILKILQQFGEIEHFQFLFHGNGPNRGEPRGYCFVEFKKKEDARKA 447 Query: 277 VRGLD 291 +RGL+ Sbjct: 448 LRGLN 452 >SB_8823| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1309 Score = 38.3 bits (85), Expect = 0.007 Identities = 18/44 (40%), Positives = 29/44 (65%) Frame = +1 Query: 112 LSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFV 243 L+ VYVGNL + YE++++FS+YG+I V + G+AF+ Sbjct: 613 LNTTVYVGNLPPDVKDYELQQMFSQYGSILETKVFAD-KGYAFI 655 Score = 32.7 bits (71), Expect = 0.34 Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 3/81 (3%) Frame = +1 Query: 91 SRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPG---FAFVEFEDPR 261 +RY + + +YVGNL ++ I IF+K + + +P + FVEFE Sbjct: 360 ARYFPEEENRSLYVGNLDPKCTQELICSIFNKIAKVVRCKMINSPTDKGPYCFVEFETHA 419 Query: 262 DAEDSVRGLDGTRCCGTRIRV 324 DA+++ +D +++V Sbjct: 420 DAQEAKFRMDQRTVMDKKLKV 440 >SB_51113| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 871 Score = 37.9 bits (84), Expect = 0.009 Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 5/58 (8%) Frame = +1 Query: 166 IEKIFSKYGNIRNVWVARNPP-----GFAFVEFEDPRDAEDSVRGLDGTRCCGTRIRV 324 I+++FS+ GN+ VA NP GFAFV++ +AE R +G + G+ IRV Sbjct: 222 IKELFSQTGNVTFAQVAINPANGGSRGFAFVDYATAEEAEKGQRAHNGRQVEGSNIRV 279 Score = 29.1 bits (62), Expect = 4.1 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 5/63 (7%) Frame = +1 Query: 124 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVAR-----NPPGFAFVEFEDPRDAEDSVRGL 288 ++VGNL ++ + + S YGNI +++ R + G+ FVE+ +A + + L Sbjct: 115 LFVGNLPFEFTETQFGDLMSPYGNIERLFLVRSEVTGDSKGYGFVEYATRENAMQAKQQL 174 Query: 289 DGT 297 T Sbjct: 175 LNT 177 >SB_52333| Best HMM Match : RRM_1 (HMM E-Value=2.3e-16) Length = 76 Score = 37.5 bits (83), Expect = 0.012 Identities = 19/70 (27%), Positives = 37/70 (52%) Frame = +1 Query: 124 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRC 303 +YV N+ S+ +++ +F+KYG I V R+ + FV F A ++ G++G Sbjct: 4 IYVRNVPLPMSETQLKAVFTKYGQIEKVRKIRD---YGFVYFAKRESAVQAIDGINGAYI 60 Query: 304 CGTRIRVEMS 333 G ++ V ++ Sbjct: 61 DGCKLEVSLA 70 >SB_37378| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 781 Score = 37.5 bits (83), Expect = 0.012 Identities = 13/54 (24%), Positives = 34/54 (62%) Frame = +1 Query: 166 IEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRCCGTRIRVE 327 ++ +FS++GN+ +VW+ + F + +F + A+ +++GL G G +++++ Sbjct: 354 LKDVFSRFGNLIDVWMMKE-RNFGYAKFAAKQSADAAIQGLHGHDVLGMKLKID 406 >SB_16504| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 252 Score = 36.7 bits (81), Expect = 0.021 Identities = 16/42 (38%), Positives = 24/42 (57%) Frame = +1 Query: 214 ARNPPGFAFVEFEDPRDAEDSVRGLDGTRCCGTRIRVEMSNG 339 A P G+AF+E+E RD + + DG + G RI V++ G Sbjct: 43 ASKPRGYAFIEYEHERDMHAAYKHADGKKIDGRRIVVDVERG 84 >SB_23537| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 371 Score = 36.3 bits (80), Expect = 0.027 Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 13/84 (15%) Frame = +1 Query: 121 KVYVGNLGTNASKYEIEKIFSKYG-NIRNVWVARNPP------------GFAFVEFEDPR 261 KVY GNL ++ E++ +F + +V + + P GF FV F +P Sbjct: 51 KVYAGNLPFKLTQDELKAVFEAESLTVTDVLIVKEPRNEFYQQQEPRSRGFGFVTFANPE 110 Query: 262 DAEDSVRGLDGTRCCGTRIRVEMS 333 DA+ +V+ L+G G +++ S Sbjct: 111 DAQTAVKSLNGKEVQGRTLKIAPS 134 >SB_28139| Best HMM Match : RRM_1 (HMM E-Value=3.7e-28) Length = 419 Score = 35.9 bits (79), Expect = 0.036 Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 4/73 (5%) Frame = +1 Query: 76 IKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVAR----NPPGFAFV 243 I+ +M++ +E D + +Y+ NL N + +E +FSKYG + + + R N G F Sbjct: 166 IQAQMAKQQEQDPT-NLYIQNLPQNCDEAMLENMFSKYGKVISTRILRDKDTNSKGVGFA 224 Query: 244 EFEDPRDAEDSVR 282 E E ++ Sbjct: 225 RMESAEKCEQVIK 237 Score = 28.3 bits (60), Expect = 7.2 Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 5/60 (8%) Frame = +1 Query: 124 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPP-----GFAFVEFEDPRDAEDSVRGL 288 +Y+ L N + ++ ++ KYG I + + G+ FV+FE P A+ +V L Sbjct: 102 LYIRGLKANTTDDDLVRLCHKYGTIISTKAILDKDTNLCKGYGFVDFESPISAQKAVAAL 161 >SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 732 Score = 35.5 bits (78), Expect = 0.048 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 3/74 (4%) Frame = +1 Query: 124 VYVGNLGTNASKYEIEKIFSKYG---NIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDG 294 V++GNL +A + + F + G R + GF + +F D ++ L+G Sbjct: 182 VFLGNLSFDADEETLAAFFEEKGLSATCRVITQEGRSRGFGYADFTSKEDYNKALE-LNG 240 Query: 295 TRCCGTRIRVEMSN 336 CCG IR+ +N Sbjct: 241 EDCCGREIRINPAN 254 >SB_33676| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 828 Score = 35.5 bits (78), Expect = 0.048 Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 5/74 (6%) Frame = +1 Query: 124 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPGFAFVEFEDPRDAEDSVRGL 288 +YV N+ + E K F YGNI N + R+ P G FV ++ +A+ ++ L Sbjct: 135 LYVCNIPKQLPEAEFRKAFEAYGNIVNCRLLRDKSTGLPKGCGFVLYDKKAEAQAAISSL 194 Query: 289 DGTRCCGTRIRVEM 330 GT G+ + +++ Sbjct: 195 SGTFFPGSTMGLQI 208 Score = 35.5 bits (78), Expect = 0.048 Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 5/64 (7%) Frame = +1 Query: 118 CKVYVGNLGTNASKYEIEKIFSKYGNIRNV-----WVARNPPGFAFVEFEDPRDAEDSVR 282 C +YV N+G +A++ I +F + G + V W + GF FV +A+++++ Sbjct: 275 CTLYVYNIGYDANQEGITALFGQCGIVNKVDIMWDWQRQQCKGFCFVTMATQEEAQNAIQ 334 Query: 283 GLDG 294 L+G Sbjct: 335 TLNG 338 >SB_29861| Best HMM Match : RRM_1 (HMM E-Value=1.10002e-42) Length = 1531 Score = 35.1 bits (77), Expect = 0.063 Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 4/78 (5%) Frame = +1 Query: 103 EWDLSCK--VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPG--FAFVEFEDPRDAE 270 E+D C ++VGN+ + ++++ F +YG + +V + + P +AFV+F + A Sbjct: 242 EFDPGCTRTLFVGNIEKTTTYGDLKEAFERYGEVIDVDIKKQPGNNPYAFVQFAELSSAI 301 Query: 271 DSVRGLDGTRCCGTRIRV 324 + R +D R++V Sbjct: 302 QARRKMDREYVGRNRVKV 319 Score = 32.3 bits (70), Expect = 0.44 Identities = 18/68 (26%), Positives = 32/68 (47%) Frame = +1 Query: 124 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRC 303 ++VG + + S+ ++E+ F +YG + V V A V F+ A + + G Sbjct: 330 IWVGGVTNSLSEQQVERHFGRYGRVTKV-VINRVTNQALVSFDSVDSATIAHAQMKGRTM 388 Query: 304 CGTRIRVE 327 R+RVE Sbjct: 389 FSRRVRVE 396 Score = 31.9 bits (69), Expect = 0.59 Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 4/52 (7%) Frame = +1 Query: 124 VYVGNLGTNASKYEIEKIFSKYGNIRNVWV--ARNPPG--FAFVEFEDPRDA 267 ++VGNL N + +I K F++YG + +V + R+ G +FV+F D R A Sbjct: 8 LWVGNLPENIREEDIVKHFTRYGRVESVKILPKRSAEGGRASFVDFVDIRSA 59 >SB_18756| Best HMM Match : Sterol_desat (HMM E-Value=0) Length = 672 Score = 35.1 bits (77), Expect = 0.063 Identities = 17/69 (24%), Positives = 37/69 (53%), Gaps = 6/69 (8%) Frame = +1 Query: 103 EWDLS-CKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPP-----GFAFVEFEDPRD 264 +WD + +++ G+LG+ + + + F+KY + + R+ G+ FV F+DP D Sbjct: 211 QWDPNDFRIFCGDLGSEVTDESLTRAFAKYTSFLKAKIVRDKKSNKSKGYGFVSFKDPND 270 Query: 265 AEDSVRGLD 291 ++R ++ Sbjct: 271 FIKAMREMN 279 >SB_32274| Best HMM Match : RRM_1 (HMM E-Value=0.0026) Length = 284 Score = 34.3 bits (75), Expect = 0.11 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 3/64 (4%) Frame = +1 Query: 142 GTNASKYEIEKIFS---KYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRCCGT 312 G N K E+IF+ YGN+ V N PG V+ D +E +R L G Sbjct: 220 GLNHEKMNCERIFNLFCLYGNVIKVKFLTNKPGACMVQMSDKIASEMIIRNLSGATIFDN 279 Query: 313 RIRV 324 +I + Sbjct: 280 KINI 283 >SB_48466| Best HMM Match : Pro_isomerase (HMM E-Value=0) Length = 298 Score = 33.9 bits (74), Expect = 0.15 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 5/74 (6%) Frame = +1 Query: 127 YVGNLGTNASKYEIEKIFSKYGNIRNV-----WVARNPPGFAFVEFEDPRDAEDSVRGLD 291 YVG L + + F +G+I +V + GF FVEFE D ++ ++ Sbjct: 8 YVGGLAEEVDEKVLHAAFIPFGDITDVQIPMDYTTSKHRGFGFVEFEFAEDTAAAIDNMN 67 Query: 292 GTRCCGTRIRVEMS 333 + G IRV ++ Sbjct: 68 ESELFGRTIRVNLA 81 >SB_46575| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 241 Score = 33.9 bits (74), Expect = 0.15 Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 6/78 (7%) Frame = +1 Query: 124 VYVGNLGTNASKYEIEK----IFSKYGNIRNVWVARNPP--GFAFVEFEDPRDAEDSVRG 285 +Y+ NL K E++K IFS++G I ++ + G AFV F+D A +++R Sbjct: 9 IYIKNLNEKIKKEELKKSLYAIFSQFGPILDIVALKTLKMRGQAFVVFKDIGSATNALRS 68 Query: 286 LDGTRCCGTRIRVEMSNG 339 + G +R++ + G Sbjct: 69 MQGFPFYDKPMRIQYAKG 86 >SB_38796| Best HMM Match : RRM_1 (HMM E-Value=0) Length = 382 Score = 33.9 bits (74), Expect = 0.15 Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 5/76 (6%) Frame = +1 Query: 124 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNP-----PGFAFVEFEDPRDAEDSVRGL 288 +YVG L S+ I ++F + G + NV + ++ G+ FVEF DA+ +++ + Sbjct: 15 IYVGGLDEKVSEALIWELFLQSGPVVNVHMPKDRITQLHQGYGFVEFLGEEDADYAIKVM 74 Query: 289 DGTRCCGTRIRVEMSN 336 + + G IRV ++ Sbjct: 75 NMIKVYGKPIRVNKAS 90 >SB_27480| Best HMM Match : RRM_1 (HMM E-Value=3.7e-18) Length = 209 Score = 33.1 bits (72), Expect = 0.25 Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 5/75 (6%) Frame = +1 Query: 124 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPG-----FAFVEFEDPRDAEDSVRGL 288 ++V L + ++E IFS++G I + V R+ +AF+EFE D E + + Sbjct: 122 LFVCKLNPVTTDEDLEIIFSRFGTILSCEVIRDQKTGESLQYAFIEFEKDEDCERAYFKM 181 Query: 289 DGTRCCGTRIRVEMS 333 D RI V+ S Sbjct: 182 DNVLIDDRRIHVDFS 196 >SB_47831| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 138 Score = 33.1 bits (72), Expect = 0.25 Identities = 12/41 (29%), Positives = 23/41 (56%) Frame = +1 Query: 76 IKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNI 198 + +S+Y+ CKV+VGN+G E++ F +G++ Sbjct: 65 VSKDISKYKVVSNKCKVFVGNIGFKVRARELKDFFGYFGDV 105 >SB_46162| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 291 Score = 33.1 bits (72), Expect = 0.25 Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 5/76 (6%) Frame = +1 Query: 121 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPP-----GFAFVEFEDPRDAEDSVRG 285 K+Y+GNL N+ + EIE+ F ++G + V + R+ GF FV + ++ Sbjct: 10 KLYIGNLNFNSDEGEIEQAFEEFG-VEKVDILRDKESGRSRGFGFVLLQSADQIAPAIEK 68 Query: 286 LDGTRCCGTRIRVEMS 333 ++ + G I V ++ Sbjct: 69 MNQSSVGGRNITVALA 84 >SB_877| Best HMM Match : RRM_1 (HMM E-Value=1e-15) Length = 145 Score = 32.3 bits (70), Expect = 0.44 Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 4/79 (5%) Frame = +1 Query: 73 SIKTKMSRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVAR----NPPGFAF 240 SI+ +S E D +Y+ + + K +E +F YG I ++ + R GF + Sbjct: 49 SIQELLSHKEEHDQRT-IYIRDFRPDIRKSSLESVFGPYGAIEDLSIIRTQTGKSKGFGY 107 Query: 241 VEFEDPRDAEDSVRGLDGT 297 V +E +AE + R L GT Sbjct: 108 VTYE---NAESAQRALAGT 123 >SB_57434| Best HMM Match : LRR_1 (HMM E-Value=3.9e-13) Length = 337 Score = 31.5 bits (68), Expect = 0.77 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = +1 Query: 124 VYVGNLGTNASKYEIEKIFSKYGNIRNV 207 V+VGNL K ++K FSKYG + +V Sbjct: 23 VFVGNLPLTLKKKALKKYFSKYGEVESV 50 >SB_31414| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 610 Score = 31.5 bits (68), Expect = 0.77 Identities = 17/70 (24%), Positives = 37/70 (52%) Frame = +1 Query: 124 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTRC 303 VY+ NL + ++ ++++ +S+YG + V ++ +AFV F + A ++ DG Sbjct: 331 VYLRNLSPSITEEKLKEEYSQYGAVDRVKKLKD---YAFVHFTERDHALKAIEETDGKEM 387 Query: 304 CGTRIRVEMS 333 G +I ++ Sbjct: 388 DGLKIEASLA 397 >SB_34470| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 435 Score = 31.5 bits (68), Expect = 0.77 Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%) Frame = +1 Query: 121 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTR 300 ++ V NL T A +++ + G + ++ G +F + D +++ LDGT Sbjct: 344 RLIVENLSTRAGWQDLKDYMRQAGEVTFTQCHKDRVGEGVCDFSNESDMLYALKKLDGTE 403 Query: 301 CCGTRIR-VEMS 333 G RIR VE+S Sbjct: 404 LFGKRIRLVEIS 415 >SB_971| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 783 Score = 31.1 bits (67), Expect = 1.0 Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 4/66 (6%) Frame = +1 Query: 124 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPG----FAFVEFEDPRDAEDSVRGLD 291 ++VGNL T S ++ F K+G + +V + R G +AFV+F D A + + Sbjct: 239 LFVGNLETGISCQDLRLSFEKFGVVLDVDIKRPARGQGNTYAFVKFADLDVAAKAKCAMQ 298 Query: 292 GTRCCG 309 G +C G Sbjct: 299 G-QCIG 303 Score = 30.7 bits (66), Expect = 1.4 Identities = 18/72 (25%), Positives = 38/72 (52%) Frame = +1 Query: 121 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGTR 300 +++VG LG S E+E+ F ++G IR + R A++ ++ A + R + G + Sbjct: 319 RLWVGGLGPWISIPELEREFDRFGAIRRI-DYRKGGDHAYILYDSLDAASVAAREMRGFQ 377 Query: 301 CCGTRIRVEMSN 336 R+R++ ++ Sbjct: 378 MGDRRLRIDFAD 389 >SB_53534| Best HMM Match : RRM_1 (HMM E-Value=1e-18) Length = 268 Score = 31.1 bits (67), Expect = 1.0 Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 7/68 (10%) Frame = +1 Query: 109 DLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN----PPGFAFVEFEDPRDAEDS 276 D+S +++V ++ E+ F +YG ++ + R+ G+AF+ FE ++ D Sbjct: 5 DISKRIFVKGFNRETTESELRAFFEEYGVVKESKIVRDKHGVSKGYAFITFES-QEVADG 63 Query: 277 VR---GLD 291 +R GLD Sbjct: 64 LRDNKGLD 71 >SB_57433| Best HMM Match : RRM_1 (HMM E-Value=4.5e-24) Length = 407 Score = 30.7 bits (66), Expect = 1.4 Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 6/91 (6%) Frame = +1 Query: 70 FSIKTKM-SRYREWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARN-----PPG 231 F I+ + S + D V++GNL + + + ++F+ GN+ +V + R+ G Sbjct: 39 FHIRVDLASNDKAHDHQRSVFIGNLPFDIEEEPLRELFTTCGNVESVRLIRDRKTGIGKG 98 Query: 232 FAFVEFEDPRDAEDSVRGLDGTRCCGTRIRV 324 F +V FE +DA ++ G +IRV Sbjct: 99 FGYVLFES-KDAVVFALKMNNAEFKGRKIRV 128 >SB_27005| Best HMM Match : NTF2 (HMM E-Value=1.1e-33) Length = 662 Score = 30.7 bits (66), Expect = 1.4 Identities = 11/31 (35%), Positives = 20/31 (64%) Frame = +1 Query: 115 SCKVYVGNLGTNASKYEIEKIFSKYGNIRNV 207 S +V++GNL + ++ ++FSKYG I + Sbjct: 356 SHQVFIGNLPSGVKDADVNEVFSKYGTILEI 386 >SB_28396| Best HMM Match : RRM_1 (HMM E-Value=0.00035) Length = 258 Score = 30.3 bits (65), Expect = 1.8 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = +1 Query: 229 GFAFVEFEDPRDAEDSVRGLDGTRCCGTRIRV 324 GF FV E+ D ED R DG G R++V Sbjct: 84 GFGFVTLENQEDLEDVTRKFDGFEYEGRRLKV 115 >SB_13046| Best HMM Match : La (HMM E-Value=5e-23) Length = 442 Score = 30.3 bits (65), Expect = 1.8 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 5/44 (11%) Frame = +1 Query: 166 IEKIFSKYGNIRNVWVAR-----NPPGFAFVEFEDPRDAEDSVR 282 ++K+FS++G + V + R GFAF+EFE + AE V+ Sbjct: 104 LKKVFSEFGKVLYVSLPRFKHNGEIKGFAFIEFESKQQAEHVVQ 147 >SB_463| Best HMM Match : RRM_1 (HMM E-Value=3.3e-16) Length = 842 Score = 29.9 bits (64), Expect = 2.4 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 9/69 (13%) Frame = +1 Query: 145 TNASKYEIEKIFSKYGNIRNVWVARNP-----PGFAFVEFEDPRDAE----DSVRGLDGT 297 T AS + + F K+G ++ V R+P GF F+ F+DP+ + + LDG Sbjct: 117 TQASAEGLRQHFEKFGELKECVVMRDPVTKRSRGFGFLTFKDPKAVDVVLNSGAQELDGK 176 Query: 298 RCCGTRIRV 324 + T ++ Sbjct: 177 KMVTTTKKI 185 >SB_34115| Best HMM Match : F5_F8_type_C (HMM E-Value=0) Length = 1572 Score = 29.5 bits (63), Expect = 3.1 Identities = 15/54 (27%), Positives = 28/54 (51%) Frame = +1 Query: 133 GNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDG 294 G L + I ++FS YG + V V ++FV ++ +A +++R L+G Sbjct: 55 GGLMCGVDRESITRVFSLYGTLERV-VMLPQRSYSFVSYKSHNNALNAMRNLNG 107 >SB_1873| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 389 Score = 29.5 bits (63), Expect = 3.1 Identities = 17/58 (29%), Positives = 31/58 (53%) Frame = +1 Query: 124 VYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEFEDPRDAEDSVRGLDGT 297 ++V L A+ + K+FS YG I N+ + + G+ FV + +A ++ L+GT Sbjct: 274 IFVYGLPQEATPLFLYKLFSPYGAITNIEL-KLDKGYGFVNMSNYEEACHAICCLNGT 330 >SB_34757| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 435 Score = 29.1 bits (62), Expect = 4.1 Identities = 12/49 (24%), Positives = 29/49 (59%) Frame = +1 Query: 103 EWDLSCKVYVGNLGTNASKYEIEKIFSKYGNIRNVWVARNPPGFAFVEF 249 E ++ K++VG L + ++ + + F+++G + +V++ + F FV F Sbjct: 194 ELNVPKKLFVGRLPESTTEKTLMEYFAQFGEVTDVYIPKPFRHFGFVTF 242 >SB_46001| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 91 Score = 29.1 bits (62), Expect = 4.1 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -1 Query: 406 GRESMIGGGDYDCVTCCGLSLCDHLT 329 GR+ I GDYD V C G+ H+T Sbjct: 30 GRKLNISDGDYDAVACVGVFTKGHVT 55 >SB_14110| Best HMM Match : DUF858 (HMM E-Value=2) Length = 207 Score = 29.1 bits (62), Expect = 4.1 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -1 Query: 406 GRESMIGGGDYDCVTCCGLSLCDHLT 329 GR+ I GDYD V C G+ H+T Sbjct: 122 GRKLNISDGDYDAVACVGVFTKGHVT 147 >SB_22450| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2806 Score = 28.3 bits (60), Expect = 7.2 Identities = 23/78 (29%), Positives = 35/78 (44%), Gaps = 4/78 (5%) Frame = +1 Query: 49 VNNFYPPFSIKTKMSRYREWDLSCKVYVGNLG----TNASKYEIEKIFSKYGNIRNVWVA 216 VN F P FS+KT++ E S VY LG S +I+++ GN+ + Sbjct: 1415 VNQFSPEFSVKTQLQNVSE-GTSGIVY-ATLGIIDKDKGSNGDIDRVEITSGNLDGAFSI 1472 Query: 217 RNPPGFAFVEFEDPRDAE 270 ++ P V+ P D E Sbjct: 1473 KSSPNDYAVQVIKPLDRE 1490 >SB_3536| Best HMM Match : RRM_1 (HMM E-Value=0) Length = 1026 Score = 27.9 bits (59), Expect = 9.5 Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 7/76 (9%) Frame = +1 Query: 121 KVYVGNLGTNASKYEIEKIFSKYGNIRNVWVA------RNPP-GFAFVEFEDPRDAEDSV 279 ++ + NL N ++ +++ FS +G + V RN GF FV+F + DA ++ Sbjct: 248 RLIIRNLAFNCTEAILKETFSAFGEVSEASVPQKKVGRRNRKMGFGFVQFTNVFDAAKAL 307 Query: 280 RGLDGTRCCGTRIRVE 327 ++ + G + V+ Sbjct: 308 EEMNAKKILGRPVAVD 323 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,626,008 Number of Sequences: 59808 Number of extensions: 343924 Number of successful extensions: 984 Number of sequences better than 10.0: 59 Number of HSP's better than 10.0 without gapping: 860 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 966 length of database: 16,821,457 effective HSP length: 81 effective length of database: 11,977,009 effective search space used: 2083999566 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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