Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0962
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF043434-1|AAC05659.1|  232|Anopheles gambiae putative pupal-spe...    27   0.57 
AF043443-1|AAC05668.1|  232|Anopheles gambiae putative pupal-spe...    25   2.3  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       25   2.3  
EF492429-1|ABP35929.1|  155|Anopheles gambiae lysozyme i-2 protein.    23   9.2  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   9.2  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   9.2  

>AF043434-1|AAC05659.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 27.1 bits (57), Expect = 0.57
 Identities = 21/94 (22%), Positives = 34/94 (36%)
 Frame = -3

Query: 569 NHRKMTATTQRRPSLRTRVHLRLRFQSHPLH*KHRFQCR*GQTRASLAPPALGYHHLTTA 390
           +H    A  +R PS     H   +  + P+H             A +A   + +HH    
Sbjct: 140 HHTGFNAVVRREPSAVKIAHPVHKVIAQPVHVS-------SYAHAPVAHATVQHHHAAPI 192

Query: 389 TQSSDH*AWRTC*XGHRHLPVANSSDDLVLRPSH 288
              +   A       H   P+A+S+  +V  PSH
Sbjct: 193 AHYAAPIAHHAAPIAHHAAPIAHSTSSIVHGPSH 226


>AF043443-1|AAC05668.1|  232|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 232

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 13/50 (26%), Positives = 21/50 (42%)
 Frame = -3

Query: 437 ASLAPPALGYHHLTTATQSSDH*AWRTC*XGHRHLPVANSSDDLVLRPSH 288
           A +A   + +HH       +   A       H   P+A+S+  +V  PSH
Sbjct: 177 APVAHATVQHHHAAPIAHYAAPIAHHAAPIAHHAAPIAHSTSSIVHGPSH 226


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 11/23 (47%), Positives = 13/23 (56%)
 Frame = +1

Query: 586 PTHCRSSTTHEDLPGRSRSPCLD 654
           P H  +STT E  PG +R P  D
Sbjct: 445 PNHTTTSTTTEGNPGTTRPPSGD 467


>EF492429-1|ABP35929.1|  155|Anopheles gambiae lysozyme i-2 protein.
          Length = 155

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 12/44 (27%), Positives = 19/44 (43%)
 Frame = +3

Query: 324 CHRKVTMTXSACSPCLMI*RLSCCGQVVIAKSRWSEGGACLTSA 455
           C R +    + CS      R S CG   I+++ W + G  +  A
Sbjct: 29  CFRCICDASTGCSTSTTC-RQSYCGPFSISRAYWMDAGRLVLPA 71


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
           polyprotein protein.
          Length = 1726

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +2

Query: 245 LNDMEKFVKMVNTMDETVLVPSRLMNLPQ 331
           L D E+F K  +   +   +PSRL  L +
Sbjct: 22  LQDFEEFTKSFDATIDAYQIPSRLEQLEE 50


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 12/34 (35%), Positives = 15/34 (44%)
 Frame = -3

Query: 584  GENGANHRKMTATTQRRPSLRTRVHLRLRFQSHP 483
            GEN   HR   +  Q R + R R  +R    S P
Sbjct: 3157 GENHNKHRLQRSRAQSRKTFRNRRGMRSNNFSEP 3190


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 699,208
Number of Sequences: 2352
Number of extensions: 13940
Number of successful extensions: 69
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)