Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0958
         (750 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1973|AAF48330.3|  777|Drosophila melanogaster CG32626-P...   123   3e-28
BT011059-1|AAR31130.1|  665|Drosophila melanogaster RE05438p pro...   120   2e-27
AE014298-1972|AAF48329.3|  774|Drosophila melanogaster CG32626-P...   120   2e-27
AY051429-1|AAK92853.1|  707|Drosophila melanogaster GH10492p pro...    75   1e-13
AE014298-1975|AAF48331.2|  652|Drosophila melanogaster CG32626-P...    75   1e-13
AE014298-1974|AAN09337.1|  707|Drosophila melanogaster CG32626-P...    75   1e-13
AE013599-3523|AAF46940.1|  410|Drosophila melanogaster CG9895-PA...    29   8.9  

>AE014298-1973|AAF48330.3|  777|Drosophila melanogaster CG32626-PD,
           isoform D protein.
          Length = 777

 Score =  123 bits (296), Expect = 3e-28
 Identities = 78/179 (43%), Positives = 104/179 (58%), Gaps = 2/179 (1%)
 Frame = +3

Query: 81  D*KLFGEIMSIRGVQDGSRS--PLIITDSFFDDGGSESPTSAVGAEAPRELPNELSAPYE 254
           D +L+G  M  +    G+ S  P I +D   D   ++SP     AEA  E+ NE+SAPYE
Sbjct: 15  DVRLYGGSMGNQLNDKGTASSTPTISSDDLSDL--ADSPVDEK-AEADVEVTNEISAPYE 71

Query: 255 VPQFPIEQIEKKLLIQRQLNVKAAECAQSVRXXXXXXXXXXXXXXXXXRLRVPDDDDDEI 434
           VPQFPIEQIEKKL IQR LN K A   + V                  R      + ++ 
Sbjct: 72  VPQFPIEQIEKKLQIQRHLNEKQATGPRPVATAAVLATNRESSSSTEGRESAVTMERNDA 131

Query: 435 ILPHFQRVAISGEDTXGVPLEDLQQAXSYLVQALEMRKRYMEMSQQSFSPITARFIRSM 611
            + +FQRV+ISGEDT GVPLEDL++A + L++AL +R  YM MS QSF   TARF++++
Sbjct: 132 DI-NFQRVSISGEDTSGVPLEDLERASTLLIEALRLRSHYMAMSDQSFPSTTARFLKTV 189


>BT011059-1|AAR31130.1|  665|Drosophila melanogaster RE05438p
           protein.
          Length = 665

 Score =  120 bits (289), Expect = 2e-27
 Identities = 66/135 (48%), Positives = 85/135 (62%)
 Frame = +3

Query: 207 AEAPRELPNELSAPYEVPQFPIEQIEKKLLIQRQLNVKAAECAQSVRXXXXXXXXXXXXX 386
           AEA  E+ NE+SAPYEVPQFPIEQIEKKL IQR LN K A   + V              
Sbjct: 53  AEADVEVTNEISAPYEVPQFPIEQIEKKLQIQRHLNEKQATGPRPVATAAVLATNRESSS 112

Query: 387 XXXXRLRVPDDDDDEIILPHFQRVAISGEDTXGVPLEDLQQAXSYLVQALEMRKRYMEMS 566
               R      + ++  + +FQRV+ISGEDT GVPLEDL++A + L++AL +R  YM MS
Sbjct: 113 STEGRESAVTMERNDADI-NFQRVSISGEDTSGVPLEDLERASTLLIEALRLRSHYMAMS 171

Query: 567 QQSFSPITARFIRSM 611
            QSF   TARF++++
Sbjct: 172 DQSFPSTTARFLKTV 186


>AE014298-1972|AAF48329.3|  774|Drosophila melanogaster CG32626-PA,
           isoform A protein.
          Length = 774

 Score =  120 bits (289), Expect = 2e-27
 Identities = 66/135 (48%), Positives = 85/135 (62%)
 Frame = +3

Query: 207 AEAPRELPNELSAPYEVPQFPIEQIEKKLLIQRQLNVKAAECAQSVRXXXXXXXXXXXXX 386
           AEA  E+ NE+SAPYEVPQFPIEQIEKKL IQR LN K A   + V              
Sbjct: 53  AEADVEVTNEISAPYEVPQFPIEQIEKKLQIQRHLNEKQATGPRPVATAAVLATNRESSS 112

Query: 387 XXXXRLRVPDDDDDEIILPHFQRVAISGEDTXGVPLEDLQQAXSYLVQALEMRKRYMEMS 566
               R      + ++  + +FQRV+ISGEDT GVPLEDL++A + L++AL +R  YM MS
Sbjct: 113 STEGRESAVTMERNDADI-NFQRVSISGEDTSGVPLEDLERASTLLIEALRLRSHYMAMS 171

Query: 567 QQSFSPITARFIRSM 611
            QSF   TARF++++
Sbjct: 172 DQSFPSTTARFLKTV 186


>AY051429-1|AAK92853.1|  707|Drosophila melanogaster GH10492p
           protein.
          Length = 707

 Score = 74.5 bits (175), Expect = 1e-13
 Identities = 33/56 (58%), Positives = 45/56 (80%)
 Frame = +3

Query: 444 HFQRVAISGEDTXGVPLEDLQQAXSYLVQALEMRKRYMEMSQQSFSPITARFIRSM 611
           +FQRV+ISGEDT GVPLEDL++A + L++AL +R  YM MS QSF   TARF++++
Sbjct: 64  NFQRVSISGEDTSGVPLEDLERASTLLIEALRLRSHYMAMSDQSFPSTTARFLKTV 119


>AE014298-1975|AAF48331.2|  652|Drosophila melanogaster CG32626-PB,
           isoform B protein.
          Length = 652

 Score = 74.5 bits (175), Expect = 1e-13
 Identities = 33/56 (58%), Positives = 45/56 (80%)
 Frame = +3

Query: 444 HFQRVAISGEDTXGVPLEDLQQAXSYLVQALEMRKRYMEMSQQSFSPITARFIRSM 611
           +FQRV+ISGEDT GVPLEDL++A + L++AL +R  YM MS QSF   TARF++++
Sbjct: 9   NFQRVSISGEDTSGVPLEDLERASTLLIEALRLRSHYMAMSDQSFPSTTARFLKTV 64


>AE014298-1974|AAN09337.1|  707|Drosophila melanogaster CG32626-PC,
           isoform C protein.
          Length = 707

 Score = 74.5 bits (175), Expect = 1e-13
 Identities = 33/56 (58%), Positives = 45/56 (80%)
 Frame = +3

Query: 444 HFQRVAISGEDTXGVPLEDLQQAXSYLVQALEMRKRYMEMSQQSFSPITARFIRSM 611
           +FQRV+ISGEDT GVPLEDL++A + L++AL +R  YM MS QSF   TARF++++
Sbjct: 64  NFQRVSISGEDTSGVPLEDLERASTLLIEALRLRSHYMAMSDQSFPSTTARFLKTV 119


>AE013599-3523|AAF46940.1|  410|Drosophila melanogaster CG9895-PA
           protein.
          Length = 410

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 13/24 (54%), Positives = 15/24 (62%)
 Frame = +2

Query: 473 GYXRGTPGGSSTSVLVPGAGSGNA 544
           GY  G PGGSS S    G G+G+A
Sbjct: 105 GYSNGKPGGSSGSSSSSGFGAGSA 128


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,114,639
Number of Sequences: 53049
Number of extensions: 658293
Number of successful extensions: 2340
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2337
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)