Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0953
         (750 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC111564-1|AAI11565.1|  626|Homo sapiens FMNL1 protein protein.        31   4.4  
BC073988-1|AAH73988.1|  682|Homo sapiens FMNL1 protein protein.        31   4.4  
AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein.     31   4.4  
AF432213-1|AAL99920.1|  991|Homo sapiens CLL-associated antigen ...    31   4.4  

>BC111564-1|AAI11565.1|  626|Homo sapiens FMNL1 protein protein.
          Length = 626

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = +3

Query: 588 VAKLKMDEESVDPAREEMYVFIXGSKNITLISRMRRPTKXKYRPTAAPTAPKCI 749
           +AK+   E+ +  AR+E+          T +   RRP + +  P AAPT P  +
Sbjct: 141 MAKIAELEKQLSQARKELETLRERFSESTAMGASRRPPEPEKAPPAAPTRPSAL 194


>BC073988-1|AAH73988.1|  682|Homo sapiens FMNL1 protein protein.
          Length = 682

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = +3

Query: 588 VAKLKMDEESVDPAREEMYVFIXGSKNITLISRMRRPTKXKYRPTAAPTAPKCI 749
           +AK+   E+ +  AR+E+          T +   RRP + +  P AAPT P  +
Sbjct: 5   MAKIAELEKQLSQARKELETLRERFSESTAMGASRRPPEPEKAPPAAPTRPSAL 58


>AY278319-1|AAP32476.1| 1100|Homo sapiens leukocyte formin protein.
          Length = 1100

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = +3

Query: 588 VAKLKMDEESVDPAREEMYVFIXGSKNITLISRMRRPTKXKYRPTAAPTAPKCI 749
           +AK+   E+ +  AR+E+          T +   RRP + +  P AAPT P  +
Sbjct: 423 MAKIAELEKQLSQARKELETLRERFSESTAMGASRRPPEPEKAPPAAPTRPSAL 476


>AF432213-1|AAL99920.1|  991|Homo sapiens CLL-associated antigen
           KW-13 protein.
          Length = 991

 Score = 31.1 bits (67), Expect = 4.4
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = +3

Query: 588 VAKLKMDEESVDPAREEMYVFIXGSKNITLISRMRRPTKXKYRPTAAPTAPKCI 749
           +AK+   E+ +  AR+E+          T +   RRP + +  P AAPT P  +
Sbjct: 314 MAKIAELEKQLSQARKELETLRERFSESTAMGASRRPPEPEKAPPAAPTRPSAL 367


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,631,047
Number of Sequences: 237096
Number of extensions: 2313666
Number of successful extensions: 10372
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10372
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)