Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0951
(400 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 21 4.5
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 21 4.5
DQ659252-1|ABG47450.1| 377|Tribolium castaneum chitinase 13 pro... 21 5.9
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 5.9
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 20 7.8
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 20 7.8
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 20 7.8
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 20 7.8
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 20 7.8
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 20 7.8
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 20 7.8
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 20 7.8
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 21.0 bits (42), Expect = 4.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 97 KTVRSCLLYQSQCSSIVRGERLFALG 174
K V C L +S + + G R ALG
Sbjct: 496 KVVAECTLKESAAINQILGRRWHALG 521
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 21.0 bits (42), Expect = 4.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = +1
Query: 97 KTVRSCLLYQSQCSSIVRGERLFALG 174
K V C L +S + + G R ALG
Sbjct: 388 KVVAECTLKESAAINQILGRRWHALG 413
>DQ659252-1|ABG47450.1| 377|Tribolium castaneum chitinase 13
protein.
Length = 377
Score = 20.6 bits (41), Expect = 5.9
Identities = 7/16 (43%), Positives = 9/16 (56%)
Frame = +1
Query: 295 PDKHAIVATTTFPGKP 342
P KH + T PG+P
Sbjct: 267 PSKHGLNDATAAPGEP 282
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
protein.
Length = 2700
Score = 20.6 bits (41), Expect = 5.9
Identities = 7/26 (26%), Positives = 14/26 (53%)
Frame = +3
Query: 204 SAIKKKREIFKRAEQYVKEYRIKERD 281
S+ ++RE + A ++K+Y D
Sbjct: 269 SSANRRREFIRSAITFIKQYNFDGMD 294
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 20.2 bits (40), Expect = 7.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 88 KGRKTVRSCLLYQSQCSSIVRGERL 162
K + V C+L C S+ RG+ L
Sbjct: 215 KATEHVIGCVLCSPGCFSLFRGKAL 239
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 20.2 bits (40), Expect = 7.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 88 KGRKTVRSCLLYQSQCSSIVRGERL 162
K + V C+L C S+ RG+ L
Sbjct: 529 KATEHVIGCVLCSPGCFSLFRGKAL 553
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 20.2 bits (40), Expect = 7.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 88 KGRKTVRSCLLYQSQCSSIVRGERL 162
K + V C+L C S+ RG+ L
Sbjct: 789 KATEHVIGCVLCSPGCFSLFRGKAL 813
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 20.2 bits (40), Expect = 7.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 88 KGRKTVRSCLLYQSQCSSIVRGERL 162
K + V C+L C S+ RG+ L
Sbjct: 789 KATEHVIGCVLCSPGCFSLFRGKAL 813
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 20.2 bits (40), Expect = 7.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 88 KGRKTVRSCLLYQSQCSSIVRGERL 162
K + V C+L C S+ RG+ L
Sbjct: 762 KATEHVIGCVLCSPGCFSLFRGKAL 786
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 20.2 bits (40), Expect = 7.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 88 KGRKTVRSCLLYQSQCSSIVRGERL 162
K + V C+L C S+ RG+ L
Sbjct: 762 KATEHVIGCVLCSPGCFSLFRGKAL 786
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 20.2 bits (40), Expect = 7.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 88 KGRKTVRSCLLYQSQCSSIVRGERL 162
K + V C+L C S+ RG+ L
Sbjct: 789 KATEHVIGCVLCSPGCFSLFRGKAL 813
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 20.2 bits (40), Expect = 7.8
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = +1
Query: 88 KGRKTVRSCLLYQSQCSSIVRGERL 162
K + V C+L C S+ RG+ L
Sbjct: 789 KATEHVIGCVLCSPGCFSLFRGKAL 813
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,604
Number of Sequences: 336
Number of extensions: 1330
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used: 8541369
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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