BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0951 (400 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 08_01_0835 + 8147177-8147359,8147871-8147968,8148045-8148102,814... 85 3e-17 04_04_1075 + 30634141-30634320,30634917-30635014,30635113-306351... 79 1e-15 10_06_0101 + 10736987-10737100,10737263-10737301,10737397-107374... 30 0.77 03_02_0651 + 10183050-10184167,10184350-10184974,10185023-101852... 27 4.1 03_06_0596 + 34964109-34964189,34964286-34964481,34964567-349647... 27 7.2 07_03_0123 - 13688562-13689146,13689233-13689583,13689665-136898... 26 9.5 >08_01_0835 + 8147177-8147359,8147871-8147968,8148045-8148102, 8148192-8148271,8148770-8148872,8148966-8149181 Length = 245 Score = 84.6 bits (200), Expect = 3e-17 Identities = 41/97 (42%), Positives = 59/97 (60%) Frame = +3 Query: 108 KLPAVPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEI 287 K VPESVLK + L + A++ ++ IF RA+QY +EY +E++ + Sbjct: 7 KAAVVPESVLKKRKREEQWAADRKEKALAEKKKAVESRKLIFARAKQYAQEYDAQEKELV 66 Query: 288 RLARQARNRGNYYVPGEAKLAFVIRIRGINQVSPKVR 398 +L R+AR +G +YV EAKL FV+RIRGIN + PK R Sbjct: 67 QLKREARMKGGFYVSPEAKLLFVVRIRGINAMHPKTR 103 >04_04_1075 + 30634141-30634320,30634917-30635014,30635113-30635170, 30635259-30635338,30635686-30635788,30635847-30636080 Length = 250 Score = 79.4 bits (187), Expect = 1e-15 Identities = 37/93 (39%), Positives = 57/93 (61%) Frame = +3 Query: 120 VPESVLKHXXXXXXXXXXXLQVTLKRRSSAIKKKREIFKRAEQYVKEYRIKERDEIRLAR 299 VPESVL+ + + + +I+ ++ IF RA+QY +EY +E++ ++L R Sbjct: 10 VPESVLRKRKREEVWAAASKEKAVAEKKKSIESRKLIFSRAKQYAEEYEAQEKELVQLKR 69 Query: 300 QARNRGNYYVPGEAKLAFVIRIRGINQVSPKVR 398 +AR +G +YV E KL FV+RIRGIN + PK R Sbjct: 70 EARMKGGFYVSPEEKLLFVVRIRGINAMHPKTR 102 >10_06_0101 + 10736987-10737100,10737263-10737301,10737397-10737474, 10737539-10737685,10737781-10737888,10738115-10738449, 10738572-10739544,10739702-10739980 Length = 690 Score = 29.9 bits (64), Expect = 0.77 Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 3/50 (6%) Frame = +3 Query: 186 TLKRRSSAIKKKREIF--KRAEQYVKE-YRIKERDEIRLARQARNRGNYY 326 TL+ R+ IK KRE+F KR E ++E ++ + E+ + A NR + Sbjct: 149 TLETRTDPIKLKREVFRRKRKEHRIQELLQVDKEAELHMRNVATNRSRNF 198 >03_02_0651 + 10183050-10184167,10184350-10184974,10185023-10185208, 10185325-10185660 Length = 754 Score = 27.5 bits (58), Expect = 4.1 Identities = 11/26 (42%), Positives = 14/26 (53%) Frame = +1 Query: 310 IVATTTFPGKPNWHLSSESVVSTKFH 387 +V +P NWHLSS S + K H Sbjct: 573 VVLNDLYPKCSNWHLSSTSYLQAKRH 598 >03_06_0596 + 34964109-34964189,34964286-34964481,34964567-34964775, 34964868-34964970,34965053-34965227,34965617-34965883, 34965966-34966311,34966396-34966533,34966645-34966770, 34966866-34967078,34967171-34967462,34967559-34967755, 34967844-34968194,34968290-34968874 Length = 1092 Score = 26.6 bits (56), Expect = 7.2 Identities = 13/24 (54%), Positives = 14/24 (58%) Frame = +3 Query: 213 KKKREIFKRAEQYVKEYRIKERDE 284 KKKR FKRAE Y + E DE Sbjct: 689 KKKRLFFKRAENQSPAYALGEIDE 712 >07_03_0123 - 13688562-13689146,13689233-13689583,13689665-13689861, 13689954-13690072,13690103-13690245,13690332-13690544, 13690649-13690774,13690891-13691028,13691109-13691454, 13691532-13691798,13691939-13691983,13692148-13692349, 13692405-13692507,13692599-13692810,13692891-13693113, 13693211-13693291 Length = 1116 Score = 26.2 bits (55), Expect = 9.5 Identities = 12/24 (50%), Positives = 14/24 (58%) Frame = +3 Query: 213 KKKREIFKRAEQYVKEYRIKERDE 284 KKKR FKRAE Y + E +E Sbjct: 713 KKKRSFFKRAENQSPAYALGEIEE 736 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 8,926,289 Number of Sequences: 37544 Number of extensions: 148900 Number of successful extensions: 377 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 377 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 377 length of database: 14,793,348 effective HSP length: 75 effective length of database: 11,977,548 effective search space used: 682720236 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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