Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0950
         (350 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   2.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    20   6.4  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    20   8.5  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 2.8
 Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +1

Query: 16  CRYLYLPTVFLDFISVYVCR-FKSSQQI*KYLDYTST 123
           C ++YL TV+  + SV+          + K++ +TST
Sbjct: 148 CYFIYLFTVYYIYYSVHEASIINFGYTLAKFMIFTST 184


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 20.2 bits (40), Expect = 6.4
 Identities = 6/22 (27%), Positives = 13/22 (59%)
 Frame = -2

Query: 154 VNATSTDNLIMYLCSLSIFKFV 89
           +N     N+ M+LC++S+   +
Sbjct: 268 INGQGQFNIEMFLCNMSLLTVI 289


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 19.8 bits (39), Expect = 8.5
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +1

Query: 40  VFLDFISVYVCRFKSSQQI 96
           +FL+    + CRFK S  +
Sbjct: 67  LFLEMTLAHHCRFKFSSSV 85


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,274
Number of Sequences: 336
Number of extensions: 984
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6981810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)