Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0949
(350 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 22 1.6
AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase ... 21 4.8
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 21 4.8
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 21 4.8
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 21 4.8
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 20 6.4
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 20 6.4
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 20 6.4
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 20 6.4
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 20 6.4
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 20 6.4
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 20 6.4
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 20 6.4
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 20 6.4
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 20 6.4
EF592539-1|ABQ95985.1| 630|Tribolium castaneum beta-N-acetylglu... 20 8.5
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 22.2 bits (45), Expect = 1.6
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = -2
Query: 316 VDKAAHLKDASPVLDHAICKSYPDSSKLTTSXARP 212
+D + H SP +DH C S D + L+ P
Sbjct: 1 MDSSDHFDRESPNIDHNSCSS--DDTVLSVGNENP 33
>AY362544-1|AAQ63456.1| 268|Tribolium castaneum chitin synthase
protein.
Length = 268
Score = 20.6 bits (41), Expect = 4.8
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -2
Query: 328 LPSKVDKAAHLKDASPV 278
LP K AHLKD +
Sbjct: 101 LPGKTKMIAHLKDKKKI 117
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 20.6 bits (41), Expect = 4.8
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -2
Query: 328 LPSKVDKAAHLKDASPV 278
LP K AHLKD +
Sbjct: 415 LPGKTKMIAHLKDKKKI 431
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 20.6 bits (41), Expect = 4.8
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -2
Query: 328 LPSKVDKAAHLKDASPV 278
LP K AHLKD +
Sbjct: 648 LPGKTKMIAHLKDKKKI 664
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 20.6 bits (41), Expect = 4.8
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = -2
Query: 328 LPSKVDKAAHLKDASPV 278
LP K AHLKD +
Sbjct: 648 LPGKTKMIAHLKDKKKI 664
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 20.2 bits (40), Expect = 6.4
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +1
Query: 1 LYACLKX*AMHVSVQAVLRRYREWLNISVLVP*ILLS 111
+YAC + V+ +RR + +++VP +L+S
Sbjct: 190 VYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 20.2 bits (40), Expect = 6.4
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +1
Query: 1 LYACLKX*AMHVSVQAVLRRYREWLNISVLVP*ILLS 111
+YAC + V+ +RR + +++VP +L+S
Sbjct: 190 VYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 20.2 bits (40), Expect = 6.4
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +1
Query: 1 LYACLKX*AMHVSVQAVLRRYREWLNISVLVP*ILLS 111
+YAC + V+ +RR + +++VP +L+S
Sbjct: 190 VYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 20.2 bits (40), Expect = 6.4
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +1
Query: 1 LYACLKX*AMHVSVQAVLRRYREWLNISVLVP*ILLS 111
+YAC + V+ +RR + +++VP +L+S
Sbjct: 190 VYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 20.2 bits (40), Expect = 6.4
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +1
Query: 1 LYACLKX*AMHVSVQAVLRRYREWLNISVLVP*ILLS 111
+YAC + V+ +RR + +++VP +L+S
Sbjct: 190 VYACCPEPYVDVTFTIKIRRRTLYYFFNLIVPCVLIS 226
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 20.2 bits (40), Expect = 6.4
Identities = 10/41 (24%), Positives = 17/41 (41%)
Frame = +2
Query: 89 WFLRSYSVTWITVVILELIHAIRTLTSDGMSAFIRSKPIDG 211
WF + T IT ++H ++ T+ M + DG
Sbjct: 1146 WFDENTKDTKITAASETILHGLKKYTNYSMEVLAYTSGGDG 1186
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 20.2 bits (40), Expect = 6.4
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 328 LPSKVDKAAHLKD 290
LP K AHLKD
Sbjct: 676 LPGKTKMIAHLKD 688
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 20.2 bits (40), Expect = 6.4
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 328 LPSKVDKAAHLKD 290
LP K AHLKD
Sbjct: 676 LPGKTKMIAHLKD 688
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 20.2 bits (40), Expect = 6.4
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 328 LPSKVDKAAHLKD 290
LP K AHLKD
Sbjct: 676 LPGKTKMIAHLKD 688
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 20.2 bits (40), Expect = 6.4
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = -2
Query: 328 LPSKVDKAAHLKD 290
LP K AHLKD
Sbjct: 676 LPGKTKMIAHLKD 688
>EF592539-1|ABQ95985.1| 630|Tribolium castaneum
beta-N-acetylglucosaminidase FDL protein.
Length = 630
Score = 19.8 bits (39), Expect = 8.5
Identities = 9/30 (30%), Positives = 14/30 (46%)
Frame = -2
Query: 301 HLKDASPVLDHAICKSYPDSSKLTTSXARP 212
H+K A PV+ + C S++L P
Sbjct: 69 HIKGAIPVVSLSTCSMLCGSTQLWPQPTGP 98
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,956
Number of Sequences: 336
Number of extensions: 1348
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used: 6981810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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