BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0949 (350 letters) Database: fruitfly 53,049 sequences; 24,988,368 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AE014296-1481|AAN12009.1| 804|Drosophila melanogaster CG32353-P... 28 2.9 AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC... 27 5.1 BT028833-1|ABI34214.2| 158|Drosophila melanogaster RT01054p pro... 27 6.7 AE014297-3190|AAF56025.1| 158|Drosophila melanogaster CG5264-PA... 27 6.7 AJ132670-1|CAA10727.1| 158|Drosophila melanogaster homeodomain ... 27 8.9 >AE014296-1481|AAN12009.1| 804|Drosophila melanogaster CG32353-PA protein. Length = 804 Score = 28.3 bits (60), Expect = 2.9 Identities = 12/22 (54%), Positives = 15/22 (68%) Frame = -3 Query: 255 VIQIHQN*RLRTRGPPSIGFDL 190 ++QI N + TR PPSIG DL Sbjct: 353 IVQIRDNIQAETRRPPSIGGDL 374 >AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC protein. Length = 4699 Score = 27.5 bits (58), Expect = 5.1 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = +3 Query: 183 LLLDQNQSTEGLAXEVVNFDESG*LLQIAWSSTGDASFKCAAL 311 +LL+Q Q EGLA ++VN Q+ W+S +A+ + L Sbjct: 2326 VLLEQQQRVEGLAYDIVN-------EQLFWTSNNNATIRSVEL 2361 >BT028833-1|ABI34214.2| 158|Drosophila melanogaster RT01054p protein. Length = 158 Score = 27.1 bits (57), Expect = 6.7 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = -2 Query: 292 DASPVLDHAICKSYPDSSKLTTSXARPSVDWF*SNKS 182 D S V DH+ SY D +KL T+ + D + N++ Sbjct: 31 DCSYVYDHSASSSYADYNKLETNWCNEANDQWLQNEA 67 >AE014297-3190|AAF56025.1| 158|Drosophila melanogaster CG5264-PA protein. Length = 158 Score = 27.1 bits (57), Expect = 6.7 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = -2 Query: 292 DASPVLDHAICKSYPDSSKLTTSXARPSVDWF*SNKS 182 D S V DH+ SY D +KL T+ + D + N++ Sbjct: 31 DCSYVYDHSASSSYADYNKLETNWCNEANDQWLQNEA 67 >AJ132670-1|CAA10727.1| 158|Drosophila melanogaster homeodomain protein protein. Length = 158 Score = 26.6 bits (56), Expect = 8.9 Identities = 13/37 (35%), Positives = 20/37 (54%) Frame = -2 Query: 292 DASPVLDHAICKSYPDSSKLTTSXARPSVDWF*SNKS 182 D S V DH+ SY D +KL T+ + D + N++ Sbjct: 31 DCSYVYDHSASSSYADYNKLETNWCTEANDQWLQNEA 67 Database: fruitfly Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 24,988,368 Number of sequences in database: 53,049 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,550,166 Number of Sequences: 53049 Number of extensions: 246218 Number of successful extensions: 699 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 689 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 699 length of database: 24,988,368 effective HSP length: 76 effective length of database: 20,956,644 effective search space used: 838265760 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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