Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0945
(689 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 24 1.6
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 24 1.6
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 24 1.6
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 24 1.6
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 24 1.6
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 24 1.6
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 2.7
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 2.7
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 2.7
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 2.7
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 22 6.3
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 22 6.3
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 21 8.4
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 21 8.4
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 21 8.4
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 21 8.4
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 8.4
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 8.4
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 581 SRGRTSARDRVAEPPMMKRKINKTLNXXNY 670
SR RT R+R EP ++ N T++ NY
Sbjct: 66 SRDRTE-RERSREPKIISSLSNNTIHNNNY 94
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 581 SRGRTSARDRVAEPPMMKRKINKTLNXXNY 670
SR RT R+R EP ++ N T++ NY
Sbjct: 67 SRDRTE-RERSREPKIISSLSNNTIHNNNY 95
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 581 SRGRTSARDRVAEPPMMKRKINKTLNXXNY 670
SR RT R+R EP ++ N T++ NY
Sbjct: 67 SRDRTE-RERSREPKIISSLSNNTIHNNNY 95
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 581 SRGRTSARDRVAEPPMMKRKINKTLNXXNY 670
SR RT R+R EP ++ N T++ NY
Sbjct: 67 SRDRTE-RERSREPKIISSLSNNTIHNNNY 95
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.8 bits (49), Expect = 1.6
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 581 SRGRTSARDRVAEPPMMKRKINKTLNXXNY 670
SR RT R+R EP ++ N T++ NY
Sbjct: 67 SRDRTE-RERSREPKIISSLSNNTIHNNNY 95
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.8 bits (49), Expect = 1.6
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 581 SRGRTSARDRVAEPPMMKRKINKTLNXXNY*KK 679
SR R R+R EP ++ N T++ NY KK
Sbjct: 300 SRDRIE-RERSREPKIISSLSNNTIHNNNYNKK 331
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 23.0 bits (47), Expect = 2.7
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -1
Query: 146 SWSRRAFSKGRRGVTYVFENTDGTL 72
S++ + S + +TYV++N +GTL
Sbjct: 201 SFAIESISYEQTAITYVWKNDEGTL 225
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 23.0 bits (47), Expect = 2.7
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -1
Query: 146 SWSRRAFSKGRRGVTYVFENTDGTL 72
S++ + S + +TYV++N +GTL
Sbjct: 201 SFAIESISYEQTAITYVWKNDEGTL 225
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 23.0 bits (47), Expect = 2.7
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -1
Query: 146 SWSRRAFSKGRRGVTYVFENTDGTL 72
S++ + S + +TYV++N +GTL
Sbjct: 252 SFAIESISYEQTAITYVWKNDEGTL 276
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 23.0 bits (47), Expect = 2.7
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = -1
Query: 146 SWSRRAFSKGRRGVTYVFENTDGTL 72
S++ + S + +TYV++N +GTL
Sbjct: 201 SFAIESISYEQTAITYVWKNDEGTL 225
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 6.3
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +2
Query: 581 SRGRTSARDRVAEPPMMKRKINKTLNXXNY 670
SR R R+R EP ++ N T++ NY
Sbjct: 66 SRDRAE-RERSREPKIISSLSNNTIHNNNY 94
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 21.8 bits (44), Expect = 6.3
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = -3
Query: 609 LSLAEVLPLDTSRTTSTEW 553
LSL V+ LDT++ EW
Sbjct: 10 LSLVSVVLLDTTQEEKLEW 28
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 8.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 581 SRGRTSARDRVAEPPMMKRKINKTLNXXNY*KKK 682
SR R R+R EP ++ NKT++ N KK
Sbjct: 67 SRDRKE-RERSKEPKIISSLSNKTIHNNNNNYKK 99
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 8.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 581 SRGRTSARDRVAEPPMMKRKINKTLNXXNY*KKK 682
SR R R+R EP ++ NKT++ N KK
Sbjct: 67 SRDRKE-RERSKEPKIISSLSNKTIHNNNNNYKK 99
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 21.4 bits (43), Expect = 8.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 581 SRGRTSARDRVAEPPMMKRKINKTLNXXNY*KKK 682
SR R R+R EP ++ NKT++ N KK
Sbjct: 67 SRDRKE-RERSKEPKIISSLSNKTIHNNNNNYKK 99
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 21.4 bits (43), Expect = 8.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 581 SRGRTSARDRVAEPPMMKRKINKTLNXXNY*KKK 682
SR R R+R EP ++ NKT++ N KK
Sbjct: 67 SRDRKE-RERSKEPKIISSLSNKTIHNNNNNYKK 99
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.4 bits (43), Expect = 8.4
Identities = 9/27 (33%), Positives = 15/27 (55%)
Frame = -3
Query: 384 LQEVLNLQTKHIIEFHLFFIQYSNTNQ 304
++ V N+ K + F L F+Q N N+
Sbjct: 42 IRPVQNMTEKVHVNFGLAFVQLINVNE 68
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.4 bits (43), Expect = 8.4
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 581 SRGRTSARDRVAEPPMMKRKINKTLNXXNY*KKK 682
SR R R+R EP ++ NKT++ N KK
Sbjct: 300 SRDRKE-RERSKEPKIISSLSNKTIHNNNNNYKK 332
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,108
Number of Sequences: 438
Number of extensions: 3807
Number of successful extensions: 21
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21073995
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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