Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0940
         (520 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    23   2.1  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    23   2.1  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    22   3.7  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   5.0  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   8.7  

>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 334 HLVSRSLWMATEDPKRVFLGAKSA 263
           H+V  + W+  +DPK + L  + A
Sbjct: 323 HIVKGNQWLGFDDPKSIQLKVEFA 346


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -1

Query: 334 HLVSRSLWMATEDPKRVFLGAKSA 263
           H+V  + W+  +DPK + L  + A
Sbjct: 323 HIVKGNQWLGFDDPKSIQLKVEFA 346


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -1

Query: 334 HLVSRSLWMATEDPKRV 284
           H+V  + W+  +DPK +
Sbjct: 322 HIVKGNQWLGFDDPKSI 338


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -1

Query: 334 HLVSRSLWMATEDPKRVFLGAKSA 263
           +L   +LW+  ++PK V L A+ A
Sbjct: 315 YLYDDTLWVGFDNPKSVALKAQYA 338


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 395 SASSRPFAARFDSLT 439
           SA SRPF  RF+  T
Sbjct: 479 SAMSRPFEVRFNPHT 493


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,895
Number of Sequences: 336
Number of extensions: 3094
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)