Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0940
         (520 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    25   2.0  
AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan transpo...    23   6.2  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   6.2  
AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan transpo...    23   6.2  

>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +2

Query: 149 GSEVRNLPEFPADQAARKDPSAAAD-GEGPTVQIREP 256
           G+EV ++PE P+D   + D    AD  E P     +P
Sbjct: 17  GAEVDSVPEVPSDLQQQLDELQLADKPEAPVDDAEQP 53


>AY536865-1|AAT07965.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 309 IHKLRETKWFKHDEQNILCAVLESG 383
           IHK++  KW K  E  + C  L  G
Sbjct: 70  IHKVQRDKWGKDIEFLLSCIALSVG 94


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 13/41 (31%), Positives = 16/41 (39%)
 Frame = +2

Query: 152  SEVRNLPEFPADQAARKDPSAAADGEGPTVQIREPGSSTFR 274
            S +R L E   + A    P    DG    V +   G  TFR
Sbjct: 2186 SPIRELLEMEPETAKFGKPEKLTDGRRVRVTVEVFGKGTFR 2226


>AJ626713-1|CAF25029.1|  650|Anopheles gambiae tryptophan
           transporter protein.
          Length = 650

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 309 IHKLRETKWFKHDEQNILCAVLESG 383
           IHK++  KW K  E  + C  L  G
Sbjct: 70  IHKVQRDKWGKDIEFLLSCIALSVG 94


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 598,723
Number of Sequences: 2352
Number of extensions: 13120
Number of successful extensions: 31
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47360208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)