Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0940
         (520 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein.        32   1.4  
AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc fi...    32   1.4  
AL590425-1|CAH69964.1|  463|Homo sapiens WD repeat domain 40B pr...    31   3.2  
AK125843-1|BAC86314.1|  288|Homo sapiens protein ( Homo sapiens ...    30   5.6  
AK090428-1|BAC03409.1|  339|Homo sapiens FLJ00345 protein protein.     30   5.6  
AL118506-14|CAI21905.1|  106|Homo sapiens sterile alpha motif do...    29   7.4  
AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain...    29   9.8  
AK131399-1|BAD18546.1|  907|Homo sapiens protein ( Homo sapiens ...    29   9.8  
AK125190-1|BAC86077.1|  188|Homo sapiens protein ( Homo sapiens ...    29   9.8  
AB083343-1|BAE96598.1| 3599|Homo sapiens zinc-finger homeodomain...    29   9.8  

>Y18448-1|CAA77176.1| 3851|Homo sapiens Bassoon protein protein.
          Length = 3851

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 5/37 (13%)
 Frame = +2

Query: 149  GSEVRNLPEFP-----ADQAARKDPSAAADGEGPTVQ 244
            GS+  +LP+ P     A +AAR+ P +A+DGEG T Q
Sbjct: 1354 GSQTEDLPQAPSGLAAAGRAAREKPLSASDGEGGTPQ 1390


>AF052224-1|AAC83555.1| 3926|Homo sapiens neuronal double zinc finger
            protein protein.
          Length = 3926

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 5/37 (13%)
 Frame = +2

Query: 149  GSEVRNLPEFP-----ADQAARKDPSAAADGEGPTVQ 244
            GS+  +LP+ P     A +AAR+ P +A+DGEG T Q
Sbjct: 1429 GSQTEDLPQAPSGLAAAGRAAREKPLSASDGEGGTPQ 1465


>AL590425-1|CAH69964.1|  463|Homo sapiens WD repeat domain 40B
           protein.
          Length = 463

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 20/45 (44%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = +2

Query: 149 GSEVRNLPEFPADQAARKDPS---AAADGEGPTVQIREPGSSTFR 274
           GS  R  P   AD  A   PS   AAADGEGP +  R+   +T+R
Sbjct: 7   GSRKRKAPAVEAD--AESSPSQGLAAADGEGPLLLKRQRRPATYR 49


>AK125843-1|BAC86314.1|  288|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43855 fis, clone TESTI4007163, highly  similar
           to Sodium- and chloride-dependent creatine transporter
           2. ).
          Length = 288

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = -1

Query: 403 ARTSRMNPDSRTAHNMFCSSCLNHL-VSRSLWMATEDPKRVF 281
           A TSR+  D+  A  +FC + L H+ +SR +     DPK+ F
Sbjct: 222 APTSRLKADALPAPPVFCVAALTHVCLSRPVPRRLSDPKKGF 263


>AK090428-1|BAC03409.1|  339|Homo sapiens FLJ00345 protein protein.
          Length = 339

 Score = 29.9 bits (64), Expect = 5.6
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = +1

Query: 250 GARLKHFSPPRRHVLDLRWPST--NSARPSGLSTMNRTYYALFWNQDSS 390
           G  L H  PP    L L WP T    +  SG   + R+ Y L W++ S+
Sbjct: 9   GCSLPHLPPPPACALLLPWPRTWVFPSPASGWRWLTRSRYPLTWSRTST 57


>AL118506-14|CAI21905.1|  106|Homo sapiens sterile alpha motif
           domain containing 10 protein.
          Length = 106

 Score = 29.5 bits (63), Expect = 7.4
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -1

Query: 385 NPDSRTAHNMFCSSCLNHLVS 323
           +PDS TAH  FC + L H VS
Sbjct: 66  SPDSATAHFSFCRTLLEHTVS 86


>AY260762-1|AAP20225.1| 3567|Homo sapiens zinc finger homeodomain 4
            protein protein.
          Length = 3567

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
 Frame = +2

Query: 170  PEFPADQAARKDPSAAADGEGPTVQIRE-----PGSSTFRPQ 280
            PE+PA++  + DPS  + G  P + +       P +ST +PQ
Sbjct: 2361 PEYPAEKPKQSDPSPPSQGTKPALPLASTSSDPPQASTAQPQ 2402


>AK131399-1|BAD18546.1|  907|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16492 fis, clone CTONG2028758, highly  similar
           to Mus musculus zfh-4 mRNA for zinc-finger homeodomain
           protein 4. ).
          Length = 907

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
 Frame = +2

Query: 170 PEFPADQAARKDPSAAADGEGPTVQIRE-----PGSSTFRPQ 280
           PE+PA++  + DPS  + G  P + +       P +ST +PQ
Sbjct: 97  PEYPAEKPKQSDPSPPSQGTKPALPLASTSSDPPQASTAQPQ 138


>AK125190-1|BAC86077.1|  188|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43200 fis, clone FEBRA2007793. ).
          Length = 188

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -2

Query: 333 TWSRGVCGWPPKIQNVSSWGRKVLEPGSRIWTVGP 229
           TW  G C WP  + N + W R+ L     +W   P
Sbjct: 80  TWPGGQCPWP--LANRTLWNRRNLGSCPALWPASP 112


>AB083343-1|BAE96598.1| 3599|Homo sapiens zinc-finger homeodomain
            protein 4 protein.
          Length = 3599

 Score = 29.1 bits (62), Expect = 9.8
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
 Frame = +2

Query: 170  PEFPADQAARKDPSAAADGEGPTVQIRE-----PGSSTFRPQ 280
            PE+PA++  + DPS  + G  P + +       P +ST +PQ
Sbjct: 2389 PEYPAEKPKQSDPSPPSQGTKPALPLASTSSDPPQASTAQPQ 2430


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,755,198
Number of Sequences: 237096
Number of extensions: 1951091
Number of successful extensions: 5123
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5123
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4933413474
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)