BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0939 (515 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 24 0.81 AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 24 1.1 AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 24 1.1 AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 23 1.9 AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 23 2.5 AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 22 3.3 AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 22 3.3 DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 21 7.5 DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 21 7.5 DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 21 10.0 >U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin protein. Length = 377 Score = 24.2 bits (50), Expect = 0.81 Identities = 11/48 (22%), Positives = 24/48 (50%) Frame = -3 Query: 252 GILYCLGFDMIVIIFSTSSSVHSPARLSRSMSAFLRTMLEYLRPTPLI 109 G + +G M+V IF ++ S+ +P+ L A ++ + P++ Sbjct: 63 GFVSAMGNGMVVYIFLSTKSLRTPSNLFVINLAISNFLMMFCMSPPMV 110 >AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule AbsCAM-Ig7B protein. Length = 1923 Score = 23.8 bits (49), Expect = 1.1 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +2 Query: 272 QKDIVDGKYSQLTSSNLDSKLREDLERLKKIRA 370 + D + QLTSS +S + D +LK IRA Sbjct: 1781 ESDESESDPDQLTSSRTESSNQLDAGKLKHIRA 1813 Score = 21.4 bits (43), Expect = 5.7 Identities = 9/20 (45%), Positives = 12/20 (60%) Frame = -3 Query: 138 LEYLRPTPLIAVIANITLRL 79 L Y+R P + +A TLRL Sbjct: 519 LPYIRLIPKVTAVAGETLRL 538 >AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member AbsCAM-Ig7A protein. Length = 1919 Score = 23.8 bits (49), Expect = 1.1 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = +2 Query: 272 QKDIVDGKYSQLTSSNLDSKLREDLERLKKIRA 370 + D + QLTSS +S + D +LK IRA Sbjct: 1777 ESDESESDPDQLTSSRTESSNQLDAGKLKHIRA 1809 Score = 21.4 bits (43), Expect = 5.7 Identities = 9/20 (45%), Positives = 12/20 (60%) Frame = -3 Query: 138 LEYLRPTPLIAVIANITLRL 79 L Y+R P + +A TLRL Sbjct: 519 LPYIRLIPKVTAVAGETLRL 538 >AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodopsin protein. Length = 152 Score = 23.0 bits (47), Expect = 1.9 Identities = 9/27 (33%), Positives = 17/27 (62%) Frame = -3 Query: 252 GILYCLGFDMIVIIFSTSSSVHSPARL 172 G + +G M+V IF ++ S+ +P+ L Sbjct: 29 GFVSVMGNGMVVYIFLSTKSLRTPSNL 55 >AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter Am-EAAT protein. Length = 543 Score = 22.6 bits (46), Expect = 2.5 Identities = 12/35 (34%), Positives = 17/35 (48%) Frame = +2 Query: 119 VGRRYSNIVLKKADIDLDKRAGECTEEEVEKIITI 223 +G+R S V K A T +E+EKI T+ Sbjct: 3 LGQRISGAVAVLRGTSEVKEAQTSTSDEIEKITTV 37 >AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter transporter-1B protein. Length = 593 Score = 22.2 bits (45), Expect = 3.3 Identities = 14/54 (25%), Positives = 25/54 (46%) Frame = -3 Query: 246 LYCLGFDMIVIIFSTSSSVHSPARLSRSMSAFLRTMLEYLRPTPLIAVIANITL 85 + C+ MI I F+TS ++ R + + T+ L PT ++ A+ L Sbjct: 540 MLCIPGYMIYIWFTTSGTISEKFRKLIRIEDDVATLRMKLNPTKAASINADFEL 593 >AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter transporter-1B protein. Length = 646 Score = 22.2 bits (45), Expect = 3.3 Identities = 14/54 (25%), Positives = 25/54 (46%) Frame = -3 Query: 246 LYCLGFDMIVIIFSTSSSVHSPARLSRSMSAFLRTMLEYLRPTPLIAVIANITL 85 + C+ MI I F+TS ++ R + + T+ L PT ++ A+ L Sbjct: 593 MLCIPGYMIYIWFTTSGTISEKFRKLIRIEDNVATLRMKLNPTKAASINADFEL 646 >DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase isoform B protein. Length = 931 Score = 21.0 bits (42), Expect = 7.5 Identities = 7/12 (58%), Positives = 8/12 (66%) Frame = -1 Query: 167 DQCRLF*EQCWS 132 D+C EQCWS Sbjct: 829 DECWRLMEQCWS 840 >DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase isoform A protein. Length = 969 Score = 21.0 bits (42), Expect = 7.5 Identities = 7/12 (58%), Positives = 8/12 (66%) Frame = -1 Query: 167 DQCRLF*EQCWS 132 D+C EQCWS Sbjct: 867 DECWRLMEQCWS 878 >DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine receptor beta2subunit protein. Length = 427 Score = 20.6 bits (41), Expect = 10.0 Identities = 6/13 (46%), Positives = 9/13 (69%) Frame = +1 Query: 40 STYSSYHEYEHRW 78 +TY+ EY+H W Sbjct: 153 TTYTPVCEYDHTW 165 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 133,022 Number of Sequences: 438 Number of extensions: 2889 Number of successful extensions: 12 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 12 length of database: 146,343 effective HSP length: 54 effective length of database: 122,691 effective search space used: 14354847 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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