Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0934
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    28   0.077
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    28   0.077
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    24   0.94 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    23   2.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   2.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   8.8  

>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 27.9 bits (59), Expect = 0.077
 Identities = 15/22 (68%), Positives = 16/22 (72%)
 Frame = +1

Query: 583 PTAAAIAYGX*QKRVLGERNVL 648
           PTAAAIAYG   K+   ERNVL
Sbjct: 4   PTAAAIAYGL-DKKAEKERNVL 24


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 27.9 bits (59), Expect = 0.077
 Identities = 15/22 (68%), Positives = 16/22 (72%)
 Frame = +1

Query: 583 PTAAAIAYGX*QKRVLGERNVL 648
           PTAAAIAYG   K+   ERNVL
Sbjct: 4   PTAAAIAYGL-DKKAERERNVL 24


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +1

Query: 583 PTAAAIAYGX*QKRVLGERNVL 648
           PTAAAIAYG  +K    E+N+L
Sbjct: 4   PTAAAIAYGLDKKG--AEQNIL 23


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 14/42 (33%), Positives = 19/42 (45%)
 Frame = +1

Query: 343 DGGKPKIKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKT 468
           D  KPKI+   + ED+    E+       K K T +  L KT
Sbjct: 241 DKDKPKIEDVGEDEDEDTKKEDKKKKKTIKEKYTEDEELNKT 282


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 567 RIINEPDCCCDCLR 608
           RI NE  CC +C R
Sbjct: 790 RIYNEKQCCKNCAR 803


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -1

Query: 113 TPTQEYVVPRSIPT 72
           TPT + VV R+IP+
Sbjct: 15  TPTDQRVVTRTIPS 28


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,695
Number of Sequences: 336
Number of extensions: 3421
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)