Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0934
(650 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 241 6e-65
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 230 1e-61
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 204 1e-53
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 195 4e-51
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 142 4e-35
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 80 2e-16
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 58 8e-10
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 36 0.007
SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces... 30 0.25
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 0.77
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 26 5.4
SPAC17G8.02 |||uridine ribohydrolase |Schizosaccharomyces pombe|... 25 9.5
SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces ... 25 9.5
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 241 bits (590), Expect = 6e-65
Identities = 125/193 (64%), Positives = 143/193 (74%)
Frame = +1
Query: 70 AVGIDLGTTYSCVGVFQHXKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 249
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 250 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 429
TIFDAKRLIGRKF+D VQ+DMKHWPF+V+S GKP ++V YKGE KTF PEE+SSMVL
Sbjct: 64 TIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLM 123
Query: 430 KMKETAEAYLGKTVQNAVYHGSRVLQ*LSKTSHKRCRYHLWLERFSESSMNPTAAAIAYG 609
KM+ETAEAYLG V +AV + + K L + PTAAAIAYG
Sbjct: 124 KMRETAEAYLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIIN-EPTAAAIAYG 182
Query: 610 X*QKRVLGERNVL 648
+ GE NVL
Sbjct: 183 L-DRSNQGESNVL 194
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 230 bits (563), Expect = 1e-61
Identities = 116/180 (64%), Positives = 135/180 (75%)
Frame = +1
Query: 70 AVGIDLGTTYSCVGVFQHXKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 249
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP+N
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 250 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 429
TIFDAKRLIGR+F D VQ+DMKHWPF+V+ GKP I+V +KGE KTF PEE+SSMVL
Sbjct: 64 TIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSMVLL 123
Query: 430 KMKETAEAYLGKTVQNAVYHGSRVLQ*LSKTSHKRCRYHLWLERFSESSMNPTAAAIAYG 609
KM+E+AEA+LG V +AV + + K L + PTAAAIAYG
Sbjct: 124 KMRESAEAFLGGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIIN-EPTAAAIAYG 182
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 204 bits (497), Expect = 1e-53
Identities = 103/180 (57%), Positives = 125/180 (69%)
Frame = +1
Query: 70 AVGIDLGTTYSCVGVFQHXKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 249
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ AMNP N
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRN 67
Query: 250 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 429
T+FDAKRLIGR++ED Q D+KHWPF+V+ + G P I+V Y GE K F +E+S+MVLT
Sbjct: 68 TVFDAKRLIGRRYEDPETQKDIKHWPFKVIDNNGIPTIEVNYLGEKKQFTAQEISAMVLT 127
Query: 430 KMKETAEAYLGKTVQNAVYHGSRVLQ*LSKTSHKRCRYHLWLERFSESSMNPTAAAIAYG 609
KMKE +EA L K V+ AV + + K L + PTAAAIAYG
Sbjct: 128 KMKEISEAKLNKRVEKAVITVPAYFSDSQRAATKDAGAIAGLNVLRIIN-EPTAAAIAYG 186
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 195 bits (476), Expect = 4e-51
Identities = 98/179 (54%), Positives = 125/179 (69%)
Frame = +1
Query: 73 VGIDLGTTYSCVGVFQHXKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 252
+GIDLGTTYSCV V ++ +VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ NP NT
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENT 97
Query: 253 IFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLTK 432
IFD KRLIGRKF++ T+ D+K +PF +V+D +P ++V G+ K F PEE+S+M+L+K
Sbjct: 98 IFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAMILSK 157
Query: 433 MKETAEAYLGKTVQNAVYHGSRVLQ*LSKTSHKRCRYHLWLERFSESSMNPTAAAIAYG 609
MK+TAEAYLGK V +AV + + K L + PTAAAIAYG
Sbjct: 158 MKQTAEAYLGKPVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVIRIVN-EPTAAAIAYG 215
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 142 bits (344), Expect = 4e-35
Identities = 82/206 (39%), Positives = 116/206 (56%), Gaps = 1/206 (0%)
Frame = +1
Query: 7 SRVFLRTSNKTD*KYKMAKAPAVGIDLGTTYSCVGVFQHXKVEIIANDQGNRTTPSYVAF 186
SR+ R ++ K+ K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAF
Sbjct: 32 SRMTARWNSNASGNEKV-KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAF 90
Query: 187 T-DTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKI 363
T D ERL+G +AK Q +NP NT F KRLIGR+F++ VQ D+K P+++V
Sbjct: 91 TKDGERLVGVSAKRQAVINPENTFFATKRLIGRRFKEPEVQRDIKEVPYKIVEHSNG--- 147
Query: 364 KVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVYHGSRVLQ*LSKTSHKRCRY 543
+ KT+ P ++ +L+KM+ETA YLGK V+NAV + + K
Sbjct: 148 DAWLEARGKTYSPSQIGGFILSKMRETASTYLGKDVKNAVVTVPAYFNDSQRQATKAAGA 207
Query: 544 HLWLERFSESSMNPTAAAIAYGX*QK 621
L + PTAAA+AYG +K
Sbjct: 208 IAGLNVLRVVN-EPTAAALAYGLDKK 232
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 80.2 bits (189), Expect = 2e-16
Identities = 44/143 (30%), Positives = 77/143 (53%), Gaps = 1/143 (0%)
Frame = +1
Query: 58 AKAPAVGIDLGTTYSCVGVFQHXKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAM 237
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEAS 62
Query: 238 NPNNTIFDAKRLIGRKFEDATVQ-ADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 414
N NT+ KRL GR ++D ++ + ++ G KV Y E+ F ++
Sbjct: 63 NFRNTVGSLKRLAGRTYDDPEIKDIESNFISAKLTEVDGFVGAKVQYLNEETAFSNIQLI 122
Query: 415 SMVLTKMKETAEAYLGKTVQNAV 483
+ TK+K AEA L +V + V
Sbjct: 123 AAYFTKIKAIAEAELIGSVSDVV 145
Score = 32.3 bits (70), Expect = 0.062
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +2
Query: 485 ITVPAYFNDSQRQATKDAGTISGLN 559
I++PA+F D QR+A +A I+GLN
Sbjct: 146 ISIPAWFTDIQRRALLEAANIAGLN 170
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 58.4 bits (135), Expect = 8e-10
Identities = 35/143 (24%), Positives = 70/143 (48%), Gaps = 6/143 (4%)
Frame = +1
Query: 73 VGIDLGTTYSCVGVFQHXKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 252
+GI G S + + K +++AN++GNR PS +++ + G A+ Q+ N +N+
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQLVRNADNS 86
Query: 253 IFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGE------DKTFFPEEVS 414
+ + + L+G+ ++ T+ H+ V+ G+ K+ + + +K E S
Sbjct: 87 VTNFRDLLGKSHDELTLH--HCHYSANPVNVEGQIGFKITVQEDEESDPKEKILTAHEAS 144
Query: 415 SMVLTKMKETAEAYLGKTVQNAV 483
L ++ E+AE +LG V V
Sbjct: 145 VRHLRRLTESAEDFLGTKVNGCV 167
Score = 29.1 bits (62), Expect = 0.58
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 485 ITVPAYFNDSQRQATKDAGTISGLNV 562
++VP YF D+QR+A + A +GL V
Sbjct: 168 MSVPVYFTDAQRKALESAANEAGLPV 193
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 35.5 bits (78), Expect = 0.007
Identities = 30/140 (21%), Positives = 59/140 (42%), Gaps = 3/140 (2%)
Frame = +1
Query: 73 VGIDLGTTYSCVGVFQHX-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 249
+ ID GT ++ + + +EI+ R S VAF ER+ G A N P +
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPAH 84
Query: 250 TIFDAKRLIGRK-FEDATVQADMKHWPFEVVSDGGKPKIKVAYK-GEDKTFFPEEVSSMV 423
+I + K L+ E VQ +P + + + +++ +++ + EE+ +M
Sbjct: 85 SIRNVKELLDTAGLESVLVQKYQSSYPAIQLVENEETTSGISFVISDEENYSLEEIIAMT 144
Query: 424 LTKMKETAEAYLGKTVQNAV 483
+ AE + + + V
Sbjct: 145 MEHYISLAEEMAHEKITDLV 164
>SPBC18A7.01 ||SPBC4F6.19c|X-Pro dipeptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 451
Score = 30.3 bits (65), Expect = 0.25
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = +1
Query: 178 VAFTDTERLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKP 357
+ F+D E GD A + P + AK L+G+ + + D P++V+ D P
Sbjct: 125 IIFSDDEPYPGDVASRIYFLVPKFELPRAKELVGKNIDAKYITWDEDENPYQVLYDRLGP 184
Query: 358 KIKVAYKGEDKTFFPE 405
+K+ G + F +
Sbjct: 185 -LKLMIDGTVRNFIAQ 199
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 0.77
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 65 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 160
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.8 bits (54), Expect = 5.4
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -2
Query: 151 GRWR*SPPSXAGRHQRKSTWYPDRFLLRVLLPFCI 47
G W SP S + H ++++ +F +RVL C+
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCM 310
>SPAC17G8.02 |||uridine ribohydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 330
Score = 25.0 bits (52), Expect = 9.5
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = -3
Query: 381 TLICYLDLRFASITDNLERPVLHVGLHSSIFELTSDETFGI 259
T I L + S+TDN+ER + +G + I +TS F +
Sbjct: 142 TNIALLLATYPSVTDNIER-FIFMGGSTGIGNITSQAEFNV 181
>SPAC6B12.02c |mus7||DNA repair protein Mus7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1888
Score = 25.0 bits (52), Expect = 9.5
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +1
Query: 406 EVSSMVLTKMKETAEAYLGKTVQNAVYHGSRVLQ*LSKTSHKRCRYHL 549
E+SS+ +KE +YLG+ A+++ +L+ LS+T + R +L
Sbjct: 1633 EISSLRKFCVKELLLSYLGEGSLAAMFYSLLLLEGLSRTYNSFRRIYL 1680
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,777,814
Number of Sequences: 5004
Number of extensions: 58286
Number of successful extensions: 179
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 167
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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