Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0934
(650 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 260 7e-70
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 256 9e-69
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 226 1e-59
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 206 9e-54
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 109 1e-24
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 3e-11
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 50 1e-06
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 40 0.002
SB_17136| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.47
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.81
SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88) 29 2.5
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3) 29 2.5
SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37) 29 3.3
SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9) 29 3.3
SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05) 28 7.6
SB_14214| Best HMM Match : AmoC (HMM E-Value=3.2) 28 7.6
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 260 bits (637), Expect = 7e-70
Identities = 134/198 (67%), Positives = 149/198 (75%)
Frame = +1
Query: 55 MAKAPAVGIDLGTTYSCVGVFQHXKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 234
MAK PAVGIDLGTTYSCVGVFQH KVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 235 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 414
MNP NT+FDAKRLIGRKF+D V DM HWPF V+ +G +PKI+V +KGE K+FFPEE+S
Sbjct: 61 MNPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEIS 120
Query: 415 SMVLTKMKETAEAYLGKTVQNAVYHGSRVLQ*LSKTSHKRCRYHLWLERFSESSMNPTAA 594
SMVLTKMKETAEAYLG V +AV + + K L + PTAA
Sbjct: 121 SMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQATKDAGTIAGLNVLRIIN-EPTAA 179
Query: 595 AIAYGX*QKRVLGERNVL 648
AIAYG K+V ERNVL
Sbjct: 180 AIAYGL-DKKVGVERNVL 196
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 256 bits (628), Expect = 9e-69
Identities = 130/198 (65%), Positives = 151/198 (76%)
Frame = +1
Query: 55 MAKAPAVGIDLGTTYSCVGVFQHXKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 234
M KAPA+GIDLGTTYSCVGVFQ+ KVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 235 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 414
+NP NTIFDAKRLIGR+++DATVQ+DMK WPF+++SD KPKI+V YKGE KTF EE+S
Sbjct: 61 LNPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEIS 120
Query: 415 SMVLTKMKETAEAYLGKTVQNAVYHGSRVLQ*LSKTSHKRCRYHLWLERFSESSMNPTAA 594
SMVL KMKETAEAYLG+ V +AV + + K L + PTAA
Sbjct: 121 SMVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQATKDAGTIAGLNVLRVIN-EPTAA 179
Query: 595 AIAYGX*QKRVLGERNVL 648
A+AYG K + GE+NVL
Sbjct: 180 ALAYGL-DKSLSGEKNVL 196
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 226 bits (552), Expect = 1e-59
Identities = 117/168 (69%), Positives = 127/168 (75%), Gaps = 25/168 (14%)
Frame = +1
Query: 55 MAKAPAVGIDLGTTYSCVGVFQHXKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 234
M KAPA+GIDLGTTYSCVGVFQH KVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 235 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEV- 411
MNP NTIFDAKRLIGR+F+D V+ DMKHW FEVV++ G+PK+KV YKGE KTFF EEV
Sbjct: 61 MNPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFEVVNEAGRPKVKVEYKGETKTFFAEEVV 120
Query: 412 ------------------------SSMVLTKMKETAEAYLGKTVQNAV 483
SSMVL KMKETAEAYLG V +AV
Sbjct: 121 NEAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAV 168
Score = 54.4 bits (125), Expect = 8e-08
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +2
Query: 485 ITVPAYFNDSQRQATKDAGTISGLNV 562
+TVPAYFNDSQRQATKDAG ISGLNV
Sbjct: 237 VTVPAYFNDSQRQATKDAGVISGLNV 262
Score = 50.0 bits (114), Expect = 2e-06
Identities = 37/81 (45%), Positives = 44/81 (54%)
Frame = +1
Query: 406 EVSSMVLTKMKETAEAYLGKTVQNAVYHGSRVLQ*LSKTSHKRCRYHLWLERFSESSMNP 585
++SSMVL KMKETAEAYLG V +AV + + K L + P
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAGVISGLNVLRIIN-EP 269
Query: 586 TAAAIAYGX*QKRVLGERNVL 648
TAAAIAYG K+V ERNVL
Sbjct: 270 TAAAIAYGL-DKKVGQERNVL 289
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +2
Query: 485 ITVPAYFNDSQRQATKDAG 541
+TVPAYFNDSQRQATKDAG
Sbjct: 169 VTVPAYFNDSQRQATKDAG 187
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 206 bits (504), Expect = 9e-54
Identities = 111/193 (57%), Positives = 134/193 (69%), Gaps = 1/193 (0%)
Frame = +1
Query: 73 VGIDLGTTYSCVGVFQHXKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAMNPNN 249
+GIDLGTTYSCVGVF++ +VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ NP N
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPEN 763
Query: 250 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 429
T+FDAKRLIGR ++D +VQ D+K +PF+VV KP ++V K E KTF EE+S+MVLT
Sbjct: 764 TVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAMVLT 823
Query: 430 KMKETAEAYLGKTVQNAVYHGSRVLQ*LSKTSHKRCRYHLWLERFSESSMNPTAAAIAYG 609
KMKETAEAYLGK V +AV + + K L PTAAAIAYG
Sbjct: 824 KMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGAIAGL-TVMRIINEPTAAAIAYG 882
Query: 610 X*QKRVLGERNVL 648
+K GE+N+L
Sbjct: 883 MDKKE--GEKNIL 893
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 109 bits (263), Expect = 1e-24
Identities = 70/199 (35%), Positives = 101/199 (50%), Gaps = 3/199 (1%)
Frame = +1
Query: 61 KAPAVGIDLGTTYSCVGVFQ--HXKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 234
K +GIDLGTTYSCVG +Q +++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 235 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSD-GGKPKIKVAYKGEDKTFFPEEV 411
+NP NTI+DAKR IG+ F + K + F V +D G V KG PEE+
Sbjct: 90 INPKNTIYDAKRFIGKTFTKQELLEIGKLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEI 149
Query: 412 SSMVLTKMKETAEAYLGKTVQNAVYHGSRVLQ*LSKTSHKRCRYHLWLERFSESSMNPTA 591
V+ K++ AE L TV AV + + + + + PTA
Sbjct: 150 GGYVIKKLRTMAERNLTTTVTKAVMSVPAEFDIKQRNATVKAASLAGITVLRVIN-EPTA 208
Query: 592 AAIAYGX*QKRVLGERNVL 648
AA+AYG +K G NV+
Sbjct: 209 AALAYGLHKKE--GVANVM 225
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 65.7 bits (153), Expect = 3e-11
Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +1
Query: 238 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVS 414
N NTI KR IGRKF D VQ ++ H P++VV I+V Y G+ + F PE+V
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVM 177
Query: 415 SMVLTKMKETAEAYLGKTVQNAV 483
+M+ T++K TAE L V + V
Sbjct: 178 AMLFTRLKTTAEIALKTKVTDCV 200
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/52 (40%), Positives = 32/52 (61%)
Frame = +1
Query: 73 VGIDLGTTYSCVGVFQHXKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 228
VG D+G + V + +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 485 ITVPAYFNDSQRQATKDAGTISGLN 559
I+VP+Y+ D QR+ DA +GLN
Sbjct: 201 ISVPSYYTDRQRRCMLDASATAGLN 225
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/26 (84%), Positives = 26/26 (100%)
Frame = +2
Query: 485 ITVPAYFNDSQRQATKDAGTISGLNV 562
ITVPA+FND+QRQATKDAGTI+GL+V
Sbjct: 43 ITVPAHFNDAQRQATKDAGTIAGLDV 68
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/41 (46%), Positives = 30/41 (73%)
Frame = +1
Query: 361 IKVAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAV 483
I V GE ++F PE++S++VL ++K AEA+LG+ V+ AV
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAV 42
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/24 (70%), Positives = 21/24 (87%)
Frame = +1
Query: 136 IIANDQGNRTTPSYVAFTDTERLI 207
IIAND G+R TP+ VAF+DTE+LI
Sbjct: 87 IIANDAGDRVTPAMVAFSDTEKLI 110
>SB_17136| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 974
Score = 31.9 bits (69), Expect = 0.47
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = +3
Query: 408 SQFHGAYENEGNCRSLSWQNCAECSLSRFPRTSMTLKDKPQKM 536
S HG Y +GN + N A C + P + TL++ P+K+
Sbjct: 405 SMLHGKYVKDGNLEEVPKGNAAACRDNEDPISRATLRNPPRKV 447
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.81
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +1
Query: 133 EIIANDQGNRTTPSYVAFT-DTERL 204
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_34580| Best HMM Match : Gp-FAR-1 (HMM E-Value=0.88)
Length = 953
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
Frame = +3
Query: 141 RQRPGQQDHSVLCCVHRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASR 311
RQ + +++ H R +R+ ++ GG +EP + R T T C+CA R
Sbjct: 267 RQSAPSRSMAIINKTHGKRHGYRKLSRDCGGRRPNEPYERTARVHTILSTDTETCFCAKR 326
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 29.5 bits (63), Expect = 2.5
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 485 ITVPAYFNDSQRQATKDAGTISGLNV 562
+TVP +FN ++R+A A + GLNV
Sbjct: 110 LTVPPFFNQAERRALLRAAELVGLNV 135
>SB_7560| Best HMM Match : Metallothio_PEC (HMM E-Value=1.3)
Length = 350
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = -2
Query: 241 GSSPPGSWRHLR*DARCL*TQHKTEWSCCPGRW 143
GS PPG W R +AR T +T +SC PG W
Sbjct: 206 GSCPPGFWCRKRREARAA-TDLET-YSCPPGFW 236
>SB_19079| Best HMM Match : LCM (HMM E-Value=6.3e-37)
Length = 420
Score = 29.1 bits (62), Expect = 3.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 259 RILCCWGSSPPGSWRH 212
R++CC G SP WRH
Sbjct: 395 RVVCCQGDSPSPRWRH 410
>SB_58645| Best HMM Match : Kelch_1 (HMM E-Value=1.9)
Length = 340
Score = 29.1 bits (62), Expect = 3.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 259 RILCCWGSSPPGSWRH 212
R++CC G SP WRH
Sbjct: 170 RVVCCQGDSPSPRWRH 185
>SB_24848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1506
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/68 (29%), Positives = 32/68 (47%)
Frame = -1
Query: 449 SAVSFIFVSTMELTSSGKKVLSSPLYATLILGLPPSLTTSKGQCFMSACTVASSNLRPMR 270
S F+F ST + +S +KV+ SPL + + P+ G S C V NL
Sbjct: 1108 SPAKFVFTSTGIVRASTRKVVPSPLRRSKVPPTVPAQRLFNGDRVESICNV--QNLSRCP 1165
Query: 269 RLASNIVL 246
++++ VL
Sbjct: 1166 KISNATVL 1173
>SB_32880| Best HMM Match : rve (HMM E-Value=3.4e-05)
Length = 1264
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/50 (30%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Frame = +3
Query: 186 HRHRASHRRCRQEPGG---DEPQQHNIRCQTSHRT*VRRCYCASRHEALA 326
H R +R+ + GG +EP + R T T C+CA R+ + A
Sbjct: 421 HGERHGYRKLSRVCGGRRPNEPYERTARVHTILSTDTETCFCAKRYGSAA 470
>SB_14214| Best HMM Match : AmoC (HMM E-Value=3.2)
Length = 451
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = -1
Query: 323 QCFMSACTVASSNLRPMRRLASNIVLLGFIATWFLAASPMRRSVSVNAT 177
QCF+S C + S + + R+ L TW + + M S +AT
Sbjct: 169 QCFLSVCDLCCSLMTQIPRMRHTWDFLEHAPTWISSQTSMSFSAITDAT 217
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,545,219
Number of Sequences: 59808
Number of extensions: 476505
Number of successful extensions: 1326
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1316
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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