SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0934
         (650 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z80223-1|CAB02319.1|  640|Caenorhabditis elegans Hypothetical pr...   258   2e-69
M18540-1|AAA28078.1|  640|Caenorhabditis elegans protein ( C.ele...   254   5e-68
Z83108-5|CAB05508.1|  645|Caenorhabditis elegans Hypothetical pr...   226   1e-59
Z83108-4|CAB05507.1|  645|Caenorhabditis elegans Hypothetical pr...   226   1e-59
Z81467-1|CAB03871.1|  643|Caenorhabditis elegans Hypothetical pr...   219   1e-57
U56965-1|AAB52671.1|  661|Caenorhabditis elegans Heat shock prot...   213   9e-56
M26604-1|AAA28074.1|  661|Caenorhabditis elegans protein ( C. el...   213   9e-56
AF000264-1|AAC71123.1|  657|Caenorhabditis elegans Heat shock pr...   209   1e-54
U88315-3|AAB42371.1|  657|Caenorhabditis elegans Heat shock prot...   134   5e-32
X07678-1|CAA30525.1|  487|Caenorhabditis elegans hsp6F protein.       131   5e-31
Z81113-10|CAB54300.1|  607|Caenorhabditis elegans Hypothetical p...   117   8e-27
Z81059-7|CAB54217.1|  607|Caenorhabditis elegans Hypothetical pr...   117   8e-27
Z49967-2|CAA90248.2|  450|Caenorhabditis elegans Hypothetical pr...   101   3e-22
L09634-1|AAA27967.1|  776|Caenorhabditis elegans Hypothetical pr...    88   6e-18
Z67884-4|CAH60753.1|  905|Caenorhabditis elegans Hypothetical pr...    59   3e-09
Z67884-3|CAA91809.2|  921|Caenorhabditis elegans Hypothetical pr...    59   3e-09
U28940-6|AAA68352.1|  925|Caenorhabditis elegans Hypothetical pr...    50   1e-06
Z81136-5|CAB03460.2|  733|Caenorhabditis elegans Hypothetical pr...    30   1.6  
L11247-1|AAA28010.2|  484|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z80220-6|CAB02305.1|  282|Caenorhabditis elegans Hypothetical pr...    29   3.8  
U41007-6|AAA82269.2|  348|Caenorhabditis elegans Hypothetical pr...    28   5.0  
AF024491-2|AAT92081.1|  765|Caenorhabditis elegans Hypothetical ...    27   8.7  
AF024491-1|AAB70312.2|  850|Caenorhabditis elegans Hypothetical ...    27   8.7  

>Z80223-1|CAB02319.1|  640|Caenorhabditis elegans Hypothetical
           protein F26D10.3 protein.
          Length = 640

 Score =  258 bits (633), Expect = 2e-69
 Identities = 134/199 (67%), Positives = 153/199 (76%), Gaps = 1/199 (0%)
 Frame = +1

Query: 55  MAKAPAVGIDLGTTYSCVGVFQHXKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 234
           M+K  AVGIDLGTTYSCVGVF H KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1   MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60

Query: 235 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEV 411
           MNP+NT+FDAKRLIGRKF+D  VQ+DMKHWPF+V+S +G KPK++V YKGE+K F PEE+
Sbjct: 61  MNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEI 120

Query: 412 SSMVLTKMKETAEAYLGKTVQNAVYHGSRVLQ*LSKTSHKRCRYHLWLERFSESSMNPTA 591
           SSMVL KMKETAEA+LG TV++AV           + + K       L      +  PTA
Sbjct: 121 SSMVLLKMKETAEAFLGTTVKDAVVTVPAYFNDSQRQATKDAGAIAGLNVLRIIN-EPTA 179

Query: 592 AAIAYGX*QKRVLGERNVL 648
           AAIAYG   K+  GERNVL
Sbjct: 180 AAIAYGL-DKKGHGERNVL 197


>M18540-1|AAA28078.1|  640|Caenorhabditis elegans protein (
           C.elegans heat shockprotein 70A gene, complete cds. ).
          Length = 640

 Score =  254 bits (621), Expect = 5e-68
 Identities = 132/199 (66%), Positives = 152/199 (76%), Gaps = 1/199 (0%)
 Frame = +1

Query: 55  MAKAPAVGIDLGTTYSCVGVFQHXKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 234
           M+K  AVGIDLGTTYSCVGVF H KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
Sbjct: 1   MSKHNAVGIDLGTTYSCVGVFMHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 60

Query: 235 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEV 411
           MNP+NT+FDAKRLIGRKF+D  VQ+DMKHWPF+V+S +G KPK++V YKGE+K F PEE+
Sbjct: 61  MNPHNTVFDAKRLIGRKFDDPAVQSDMKHWPFKVISAEGAKPKVQVEYKGENKIFTPEEI 120

Query: 412 SSMVLTKMKETAEAYLGKTVQNAVYHGSRVLQ*LSKTSHKRCRYHLWLERFSESSMNPTA 591
           SSMVL KMK+TAEA+L  TV++AV           + + K       L      +  PTA
Sbjct: 121 SSMVLLKMKKTAEAFLEPTVKDAVVTVPTYFNDSQRQATKDAGAIAGLNVLRIIN-EPTA 179

Query: 592 AAIAYGX*QKRVLGERNVL 648
           AAIAYG   K+  GERNVL
Sbjct: 180 AAIAYGL-DKKGHGERNVL 197


>Z83108-5|CAB05508.1|  645|Caenorhabditis elegans Hypothetical
           protein F44E5.5 protein.
          Length = 645

 Score =  226 bits (552), Expect = 1e-59
 Identities = 113/198 (57%), Positives = 141/198 (71%)
 Frame = +1

Query: 55  MAKAPAVGIDLGTTYSCVGVFQHXKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 234
           M+   A+GIDLGTTYSCVG++Q+ KVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1   MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60

Query: 235 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 414
            NP NT+FDAKRLIGR+F+++TVQ+D KHWPF V    GKP I+V  KGE + F PEE+S
Sbjct: 61  RNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEIS 120

Query: 415 SMVLTKMKETAEAYLGKTVQNAVYHGSRVLQ*LSKTSHKRCRYHLWLERFSESSMNPTAA 594
           +MVL KMKETAE YLG TV++AV           + + K       L      +  PTAA
Sbjct: 121 AMVLQKMKETAETYLGHTVKDAVITVPAYFNDSQRQATKDAATIAGLNAIRIIN-EPTAA 179

Query: 595 AIAYGX*QKRVLGERNVL 648
           A+AYG   K +  E+NVL
Sbjct: 180 ALAYGL-DKGIQDEKNVL 196


>Z83108-4|CAB05507.1|  645|Caenorhabditis elegans Hypothetical
           protein F44E5.4 protein.
          Length = 645

 Score =  226 bits (552), Expect = 1e-59
 Identities = 113/198 (57%), Positives = 141/198 (71%)
 Frame = +1

Query: 55  MAKAPAVGIDLGTTYSCVGVFQHXKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 234
           M+   A+GIDLGTTYSCVG++Q+ KVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1   MSSCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60

Query: 235 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 414
            NP NT+FDAKRLIGR+F+++TVQ+D KHWPF V    GKP I+V  KGE + F PEE+S
Sbjct: 61  RNPENTVFDAKRLIGRRFDESTVQSDCKHWPFGVKGKQGKPVIEVEVKGEKRQFNPEEIS 120

Query: 415 SMVLTKMKETAEAYLGKTVQNAVYHGSRVLQ*LSKTSHKRCRYHLWLERFSESSMNPTAA 594
           +MVL KMKETAE YLG TV++AV           + + K       L      +  PTAA
Sbjct: 121 AMVLQKMKETAETYLGHTVKDAVITVPAYFNDSQRQATKDAATIAGLNAIRIIN-EPTAA 179

Query: 595 AIAYGX*QKRVLGERNVL 648
           A+AYG   K +  E+NVL
Sbjct: 180 ALAYGL-DKGIQDEKNVL 196


>Z81467-1|CAB03871.1|  643|Caenorhabditis elegans Hypothetical
           protein C12C8.1 protein.
          Length = 643

 Score =  219 bits (535), Expect = 1e-57
 Identities = 109/198 (55%), Positives = 140/198 (70%)
 Frame = +1

Query: 55  MAKAPAVGIDLGTTYSCVGVFQHXKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 234
           M+   A+GIDLGTTYSCVG++Q+ KVEI+AN +GN+TTPSYVAFTDTERL+GDAAK+Q A
Sbjct: 1   MSTCKAIGIDLGTTYSCVGIYQNGKVEILANSEGNKTTPSYVAFTDTERLVGDAAKDQAA 60

Query: 235 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVS 414
            NP NT+FDAKRLIGR+F++ TVQ+D+KHWPF V    GKP ++V  KGE + F  EE+S
Sbjct: 61  RNPENTVFDAKRLIGRRFDEETVQSDIKHWPFTVKGKQGKPVVEVEVKGEKREFNAEEIS 120

Query: 415 SMVLTKMKETAEAYLGKTVQNAVYHGSRVLQ*LSKTSHKRCRYHLWLERFSESSMNPTAA 594
           +MVL KMKETAEA LG +V++AV           + + K       L      +  PTAA
Sbjct: 121 AMVLQKMKETAEAVLGHSVRDAVITVPAYFNDSQRQATKDAATIAGLNAIRIIN-EPTAA 179

Query: 595 AIAYGX*QKRVLGERNVL 648
           A+AYG   K +  E+N+L
Sbjct: 180 ALAYGL-DKGITDEKNIL 196


>U56965-1|AAB52671.1|  661|Caenorhabditis elegans Heat shock protein
           protein 3 protein.
          Length = 661

 Score =  213 bits (520), Expect = 9e-56
 Identities = 115/214 (53%), Positives = 142/214 (66%), Gaps = 2/214 (0%)
 Frame = +1

Query: 13  VFLRTSNKTD*KYKMAKAPAVGIDLGTTYSCVGVFQHXKVEIIANDQGNRTTPSYVAFTD 192
           V+     KT+ K +      +GIDLGTTYSCVGV+++ +VEIIANDQGNR TPSYVAF+ 
Sbjct: 17  VYCEEEEKTE-KKETKYGTIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSG 75

Query: 193 TE--RLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIK 366
            +  RLIGDAAKNQ+ +NP NTIFDAKRLIGR + D TVQAD+KHWPF+V+    KP ++
Sbjct: 76  DQGDRLIGDAAKNQLTINPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVE 135

Query: 367 VAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVYHGSRVLQ*LSKTSHKRCRYH 546
           V    ++K F PEEVS+MVL KMKE AE+YLGK V+NAV           + + K     
Sbjct: 136 VKVGSDNKQFTPEEVSAMVLVKMKEIAESYLGKEVKNAVVTVPAYFNDAQRQATKDAGTI 195

Query: 547 LWLERFSESSMNPTAAAIAYGX*QKRVLGERNVL 648
             L         PTAAAIAYG  +K   GERN+L
Sbjct: 196 AGL-NVVRIINEPTAAAIAYGLDKKD--GERNIL 226


>M26604-1|AAA28074.1|  661|Caenorhabditis elegans protein ( C.
           elegans BiP (hsp3)gene, complete cds. ).
          Length = 661

 Score =  213 bits (520), Expect = 9e-56
 Identities = 114/214 (53%), Positives = 143/214 (66%), Gaps = 2/214 (0%)
 Frame = +1

Query: 13  VFLRTSNKTD*KYKMAKAPAVGIDLGTTYSCVGVFQHXKVEIIANDQGNRTTPSYVAFTD 192
           ++ +   KT+ K +      +GIDLGTTYSCVGV+++ +VEIIANDQGNR TPSYVAF+ 
Sbjct: 17  IYCKEEEKTE-KKETKYETIIGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSG 75

Query: 193 TE--RLIGDAAKNQVAMNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIK 366
            +  RLIGDAAKNQ+ +NP NTIFDAKRLIGR + D TVQAD+KHWPF+V+    KP ++
Sbjct: 76  DQGDRLIGDAAKNQLTINPENTIFDAKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVE 135

Query: 367 VAYKGEDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVYHGSRVLQ*LSKTSHKRCRYH 546
           V    ++K F PEEVS+MVL KMKE AE+YLGK V+NAV           + + K     
Sbjct: 136 VKVGSDNKQFTPEEVSAMVLVKMKEIAESYLGKEVKNAVVTVPAYFNDAQRQATKDAGTI 195

Query: 547 LWLERFSESSMNPTAAAIAYGX*QKRVLGERNVL 648
             L         PTAAAIAYG  +K   GERN+L
Sbjct: 196 AGL-NVVRIINEPTAAAIAYGLDKKD--GERNIL 226


>AF000264-1|AAC71123.1|  657|Caenorhabditis elegans Heat shock
           protein protein 4 protein.
          Length = 657

 Score =  209 bits (511), Expect = 1e-54
 Identities = 112/194 (57%), Positives = 133/194 (68%), Gaps = 2/194 (1%)
 Frame = +1

Query: 73  VGIDLGTTYSCVGVFQHXKVEIIANDQGNRTTPSYVAFTDT--ERLIGDAAKNQVAMNPN 246
           +GIDLGTTYSCVGVF++ +VEIIANDQGNR TPSYVAF+    ERLIGDAAKNQ+ +NP 
Sbjct: 33  IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINPE 92

Query: 247 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVL 426
           NTIFDAKRLIGR + + TVQ D+KHWPF++V    KP ++V    E K F PEEVS+MVL
Sbjct: 93  NTIFDAKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKVGSETKQFTPEEVSAMVL 152

Query: 427 TKMKETAEAYLGKTVQNAVYHGSRVLQ*LSKTSHKRCRYHLWLERFSESSMNPTAAAIAY 606
           TKMK+ AE+YLG  V+NAV           K + K       L         PTAAAIAY
Sbjct: 153 TKMKQIAESYLGHEVKNAVVTVPAYFNDAQKQATKDAGSIAGL-NVVRIINEPTAAAIAY 211

Query: 607 GX*QKRVLGERNVL 648
           G  +K   GERN+L
Sbjct: 212 GLDKKD--GERNIL 223


>U88315-3|AAB42371.1|  657|Caenorhabditis elegans Heat shock protein
           protein 6 protein.
          Length = 657

 Score =  134 bits (324), Expect = 5e-32
 Identities = 80/185 (43%), Positives = 106/185 (57%), Gaps = 2/185 (1%)
 Frame = +1

Query: 61  KAPAVGIDLGTTYSCVGVFQHXKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 237
           K   +GIDLGTT SCV + +    ++I N +G RTTPS VAFT D ERL+G  AK Q   
Sbjct: 30  KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89

Query: 238 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFPEEVS 414
           N  NT+F  KRLIGR++ED  VQ D+K  P+++V +  G   +    + + K + P +V 
Sbjct: 90  NSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWV----EAQGKVYSPSQVG 145

Query: 415 SMVLTKMKETAEAYLGKTVQNAVYHGSRVLQ*LSKTSHKRCRYHLWLERFSESSMNPTAA 594
           + VL KMKETAE+YLG TV NAV           + + K       L      +  PTAA
Sbjct: 146 AFVLMKMKETAESYLGTTVNNAVVTVPAYFNDSQRQATKDAGQISGLNVLRVIN-EPTAA 204

Query: 595 AIAYG 609
           A+AYG
Sbjct: 205 ALAYG 209


>X07678-1|CAA30525.1|  487|Caenorhabditis elegans hsp6F protein.
          Length = 487

 Score =  131 bits (316), Expect = 5e-31
 Identities = 79/185 (42%), Positives = 105/185 (56%), Gaps = 2/185 (1%)
 Frame = +1

Query: 61  KAPAVGIDLGTTYSCVGVFQHXKVEIIANDQGNRTTPSYVAFT-DTERLIGDAAKNQVAM 237
           K   +GIDLGTT SCV + +    ++I N +G RTTPS VAFT D ERL+G  AK Q   
Sbjct: 30  KGHVIGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVT 89

Query: 238 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVV-SDGGKPKIKVAYKGEDKTFFPEEVS 414
           N  NT+F  KRLIGR++ED  VQ D+K  P+++V +  G   +    + + K + P +V 
Sbjct: 90  NSANTLFATKRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWV----EAQGKEYPPSQVG 145

Query: 415 SMVLTKMKETAEAYLGKTVQNAVYHGSRVLQ*LSKTSHKRCRYHLWLERFSESSMNPTAA 594
           + VL KMKETAE+YLG TV N V           + + K       L      +  PTAA
Sbjct: 146 AFVLMKMKETAESYLGTTVNNPVVTVPAYFNDSQRQATKDAGQISGLNVLRVIN-EPTAA 204

Query: 595 AIAYG 609
           A+AYG
Sbjct: 205 ALAYG 209


>Z81113-10|CAB54300.1|  607|Caenorhabditis elegans Hypothetical
           protein F11F1.1 protein.
          Length = 607

 Score =  117 bits (281), Expect = 8e-27
 Identities = 73/195 (37%), Positives = 108/195 (55%), Gaps = 2/195 (1%)
 Frame = +1

Query: 70  AVGIDLGTTYSCVGVFQHXKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPN 246
           ++GIDLGTT+SCV  +Q+ +V I+ N+ G RTTPS +A   D + LIG  AK+ +     
Sbjct: 2   SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIG-KAT 60

Query: 247 NTIFDAKRLIGRKFEDATVQADMKHWPFEV-VSDGGKPKIKVAYKGEDKTFFPEEVSSMV 423
           N++FD KR+IGR+++D  +Q DM  WPF+V   D G P +++    +   F    VSS++
Sbjct: 61  NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLI 120

Query: 424 LTKMKETAEAYLGKTVQNAVYHGSRVLQ*LSKTSHKRCRYHLWLERFSESSMNPTAAAIA 603
           L  +K  AE  LG  V++AV           + + +       L +       PTAAAIA
Sbjct: 121 LRCLKYNAERKLGLEVKSAVITVPAYFNATQRRATEEAAEIAGL-KVLRILNEPTAAAIA 179

Query: 604 YGX*QKRVLGERNVL 648
           Y    +R L  RN+L
Sbjct: 180 YSLKGQR-LSRRNIL 193


>Z81059-7|CAB54217.1|  607|Caenorhabditis elegans Hypothetical
           protein F11F1.1 protein.
          Length = 607

 Score =  117 bits (281), Expect = 8e-27
 Identities = 73/195 (37%), Positives = 108/195 (55%), Gaps = 2/195 (1%)
 Frame = +1

Query: 70  AVGIDLGTTYSCVGVFQHXKVEIIANDQGNRTTPSYVAF-TDTERLIGDAAKNQVAMNPN 246
           ++GIDLGTT+SCV  +Q+ +V I+ N+ G RTTPS +A   D + LIG  AK+ +     
Sbjct: 2   SIGIDLGTTFSCVAYYQNGQVNILENENGCRTTPSVLAVGEDGDLLIGQHAKDVIG-KAT 60

Query: 247 NTIFDAKRLIGRKFEDATVQADMKHWPFEV-VSDGGKPKIKVAYKGEDKTFFPEEVSSMV 423
           N++FD KR+IGR+++D  +Q DM  WPF+V   D G P +++    +   F    VSS++
Sbjct: 61  NSLFDVKRIIGRRYDDVLLQRDMPLWPFKVEKDDNGIPYLEIHKNEKPLKFSAVTVSSLI 120

Query: 424 LTKMKETAEAYLGKTVQNAVYHGSRVLQ*LSKTSHKRCRYHLWLERFSESSMNPTAAAIA 603
           L  +K  AE  LG  V++AV           + + +       L +       PTAAAIA
Sbjct: 121 LRCLKYNAERKLGLEVKSAVITVPAYFNATQRRATEEAAEIAGL-KVLRILNEPTAAAIA 179

Query: 604 YGX*QKRVLGERNVL 648
           Y    +R L  RN+L
Sbjct: 180 YSLKGQR-LSRRNIL 193


>Z49967-2|CAA90248.2|  450|Caenorhabditis elegans Hypothetical
           protein F54C9.2 protein.
          Length = 450

 Score =  101 bits (243), Expect = 3e-22
 Identities = 73/214 (34%), Positives = 109/214 (50%), Gaps = 13/214 (6%)
 Frame = +1

Query: 46  KYKMAKAPA--VGIDLGTTYSCVGVFQHXKVE--IIANDQGNRTTPSYVAFTDTER-LIG 210
           KY +   P    GIDLGTTYS +G++     E  I+ +D G ++ PS VAF      LIG
Sbjct: 25  KYGLPPPPPKIAGIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIG 84

Query: 211 DAAKNQVAMNPNNTIFDAKRLIGRKFE--DATVQADMKHWPFEVVSDG-GKPKIKVAYKG 381
             A  Q   NP  TI+DAKR IGR FE  +    +D K +PF++  D  GK   ++    
Sbjct: 85  TRATEQQEHNPKRTIYDAKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIPLDS 144

Query: 382 EDKTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVYHGSRVLQ*LSKTSHKRCRYHLWLER 561
             K  +PEE+ S+++  +K  A  +LG T+      G  V+   ++ + K+  +      
Sbjct: 145 GTKNVYPEEIGSLIIGYLKSAAAKHLGVTL------GQVVISCPAEFNEKQRNFTAKAAE 198

Query: 562 FSESSM-----NPTAAAIAYGX*QKRVLGERNVL 648
            +E  +      PTAAA+AYG  +K+  G  NV+
Sbjct: 199 IAEMEVRRVISEPTAAALAYGLHKKQ--GVENVV 230


>L09634-1|AAA27967.1|  776|Caenorhabditis elegans Hypothetical
           protein C30C11.4 protein.
          Length = 776

 Score = 87.8 bits (208), Expect = 6e-18
 Identities = 47/130 (36%), Positives = 71/130 (54%), Gaps = 1/130 (0%)
 Frame = +1

Query: 73  VGIDLGTTYSCVGVFQHXKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNNT 252
           +G D+G     +GV +   +E+I ND     TP+ V+F   +R +G AA+  V  N  NT
Sbjct: 4   LGFDIGNLNCYIGVARQGGIEVITNDYSLHATPACVSFGPKDRSMGVAARQAVTTNIKNT 63

Query: 253 IFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEVSSMVLT 429
           + + K LIGRKF D   Q  +   P +VV        ++V+Y GE  TF PE+V + +LT
Sbjct: 64  VINFKHLIGRKFSDPVAQRFIPFIPCKVVKLPNDDIGVQVSYLGEPHTFTPEQVLAALLT 123

Query: 430 KMKETAEAYL 459
           K++   E+ L
Sbjct: 124 KLRTIVESQL 133



 Score = 27.9 bits (59), Expect = 6.6
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +2

Query: 485 ITVPAYFNDSQRQATKDAGTISGLN 559
           + VP+YF D QR+A   A   +GLN
Sbjct: 144 LAVPSYFTDVQRRAVLSAIQYAGLN 168


>Z67884-4|CAH60753.1|  905|Caenorhabditis elegans Hypothetical
           protein T14G8.3b protein.
          Length = 905

 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 2/144 (1%)
 Frame = +1

Query: 58  AKAPAVGIDLGTTYSCVGVFQHX-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 234
           A   A+ IDLG+ +  +G+ +    ++I+ N +  R TP+ ++F + ER   +AA    +
Sbjct: 8   AALAAMSIDLGSQFIKIGLVKPGVPMDIVLNKESRRKTPNVISFKNDERFFAEAAAAMSS 67

Query: 235 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEV 411
            +P ++      +I RK  D       K +PF     D  +  +   YK E+K +  E +
Sbjct: 68  SHPQSSYNFLLSMIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFPYK-EEK-YNVETL 125

Query: 412 SSMVLTKMKETAEAYLGKTVQNAV 483
            +M+L   K+  EAY  +TV++ V
Sbjct: 126 LAMILWNAKKVTEAYADQTVKDVV 149



 Score = 29.9 bits (64), Expect = 1.6
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +2

Query: 485 ITVPAYFNDSQRQATKDAGTISGLNV 562
           ITVP + N ++R+A   A  I+GLN+
Sbjct: 150 ITVPIFLNQAERRAIASAAEIAGLNL 175


>Z67884-3|CAA91809.2|  921|Caenorhabditis elegans Hypothetical
           protein T14G8.3a protein.
          Length = 921

 Score = 58.8 bits (136), Expect = 3e-09
 Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 2/144 (1%)
 Frame = +1

Query: 58  AKAPAVGIDLGTTYSCVGVFQHX-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 234
           A   A+ IDLG+ +  +G+ +    ++I+ N +  R TP+ ++F + ER   +AA    +
Sbjct: 24  AALAAMSIDLGSQFIKIGLVKPGVPMDIVLNKESRRKTPNVISFKNDERFFAEAAAAMSS 83

Query: 235 MNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEVVS-DGGKPKIKVAYKGEDKTFFPEEV 411
            +P ++      +I RK  D       K +PF     D  +  +   YK E+K +  E +
Sbjct: 84  SHPQSSYNFLLSMIARKEGDDAFVTFQKTFPFTAFEFDEVRKTVVFPYK-EEK-YNVETL 141

Query: 412 SSMVLTKMKETAEAYLGKTVQNAV 483
            +M+L   K+  EAY  +TV++ V
Sbjct: 142 LAMILWNAKKVTEAYADQTVKDVV 165



 Score = 29.9 bits (64), Expect = 1.6
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +2

Query: 485 ITVPAYFNDSQRQATKDAGTISGLNV 562
           ITVP + N ++R+A   A  I+GLN+
Sbjct: 166 ITVPIFLNQAERRAIASAAEIAGLNL 191


>U28940-6|AAA68352.1|  925|Caenorhabditis elegans Hypothetical
           protein T24H7.2 protein.
          Length = 925

 Score = 50.4 bits (115), Expect = 1e-06
 Identities = 42/192 (21%), Positives = 84/192 (43%), Gaps = 2/192 (1%)
 Frame = +1

Query: 70  AVGIDLGTTYSCVGVFQHX-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPN 246
           A+ IDLGT +  +G+ +    ++I  N +  R TP+ V   D  R   DAA       P+
Sbjct: 26  AMTIDLGTQFLKIGIVKPGIPMDIALNTESRRKTPNVVMIQDGHRTFADAAIGMQVRYPH 85

Query: 247 NTIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVL 426
                   L+G+  +  + +   +   F  V D  K    + +K   +++  E +++M+L
Sbjct: 86  LVHGQLNDLVGKSTQHPSFELFKRRNTFFEVDDAPKNASSINFKLGGESYTVEALTAMIL 145

Query: 427 TKMKETAEAYL-GKTVQNAVYHGSRVLQ*LSKTSHKRCRYHLWLERFSESSMNPTAAAIA 603
              K+  E Y     +++ V           + + +R      L    +   + TAAA++
Sbjct: 146 ANAKKFTEEYAQAAEIKDVVITVPVYFTPAERLAVERAAQMAGL-TVLQLINDGTAAALS 204

Query: 604 YGX*QKRVLGER 639
           +G  +++ +GE+
Sbjct: 205 HGIFRRKEIGEK 216



 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 485 ITVPAYFNDSQRQATKDAGTISGLNV 562
           ITVP YF  ++R A + A  ++GL V
Sbjct: 166 ITVPVYFTPAERLAVERAAQMAGLTV 191


>Z81136-5|CAB03460.2|  733|Caenorhabditis elegans Hypothetical
           protein W02B8.4 protein.
          Length = 733

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 23/86 (26%), Positives = 41/86 (47%)
 Frame = +1

Query: 250 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 429
           T+  AKR I R  E  T+++D    PF +++      +K A K +D+     +   ++L 
Sbjct: 205 TVRRAKRSIIRNAESYTLKSDFDKSPFSIITKHLTNSVK-ALKKKDRI---SKWQDIILR 260

Query: 430 KMKETAEAYLGKTVQNAVYHGSRVLQ 507
             KE+++    K ++N      RV Q
Sbjct: 261 IQKESSQLRKRKEIENLQRKRIRVFQ 286


>L11247-1|AAA28010.2|  484|Caenorhabditis elegans Hypothetical
           protein F09G8.5 protein.
          Length = 484

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
 Frame = -3

Query: 531 FVACL*E--SLKYAGTVINCILH--SFAKISFGSFLHFRKHHGTDF 406
           F++CL    S+ +   ++  ILH  SF  +SF SFLHFR     +F
Sbjct: 7   FLSCLSMLVSIAFQSVLLPLILHLFSFFLLSFLSFLHFRSFSANNF 52


>Z80220-6|CAB02305.1|  282|Caenorhabditis elegans Hypothetical
           protein T08G11.2 protein.
          Length = 282

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 162 DHSVLCCVHRHRASHRRCRQEPGGDEPQQHNI 257
           D  V+CCVH  R S+ +  Q+   D+ Q  N+
Sbjct: 23  DGEVVCCVHGRRCSYGKGNQDGKRDDNQYVNL 54


>U41007-6|AAA82269.2|  348|Caenorhabditis elegans Hypothetical
           protein C33H5.10 protein.
          Length = 348

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 22/80 (27%), Positives = 29/80 (36%), Gaps = 2/80 (2%)
 Frame = +3

Query: 42  LKIQNGKST--RSRNRSGYHVLLRWCLPAXEGGDHRQRPGQQDHSVLCCVHRHRASHRRC 215
           L IQ   S   R R +S  H L     P   GG   +  G +  S     H     H + 
Sbjct: 241 LYIQKASSMDRRERTKSKQHPLSIMDAPKDRGGRTEEMVGVKQESFRQQQHTFDRQHSQN 300

Query: 216 RQEPGGDEPQQHNIRCQTSH 275
           RQ+   D P+ H  +    H
Sbjct: 301 RQKSTFDRPKTHEEQVLEQH 320


>AF024491-2|AAT92081.1|  765|Caenorhabditis elegans Hypothetical
           protein C24A1.3b protein.
          Length = 765

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 489 VINCILHSFAKISFGSFLHFRKHHGTDFLGEKGFVFTLI 373
           ++  +L+S A I    F+HF   H   + G++  V TLI
Sbjct: 165 MLTILLNSGANIHVTDFVHFTALHCATYFGQENAVRTLI 203


>AF024491-1|AAB70312.2|  850|Caenorhabditis elegans Hypothetical
           protein C24A1.3a protein.
          Length = 850

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = -3

Query: 489 VINCILHSFAKISFGSFLHFRKHHGTDFLGEKGFVFTLI 373
           ++  +L+S A I    F+HF   H   + G++  V TLI
Sbjct: 165 MLTILLNSGANIHVTDFVHFTALHCATYFGQENAVRTLI 203


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,666,268
Number of Sequences: 27780
Number of extensions: 344969
Number of successful extensions: 1021
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 926
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 982
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -