Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0934
(650 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 24 1.1
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 24 1.5
S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor prot... 23 1.9
S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor prot... 23 1.9
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 1.9
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 1.9
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 1.9
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 1.9
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 4.5
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 5.9
AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc fi... 22 5.9
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 24.2 bits (50), Expect = 1.1
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = +3
Query: 378 G*RQNLFPRGSQFHGAYENEGNCRSLSWQNCAECSLSRFPRTSMTLKDK 524
G R F R S H YE+ + S++N E S SR KD+
Sbjct: 218 GSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSREYKKKDR 266
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.8 bits (49), Expect = 1.5
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +3
Query: 384 RQNLFPRGSQFHGAYENEGNCRSLSWQNCAECSLSRFPRTSMTLKDK 524
R F R S H YE+ + S++N E S SR KD+
Sbjct: 220 RSRSFQRTSSCHSRYEDSRHEDGNSYRNDGERSCSRDRSREYKKKDR 266
>S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor
protein.
Length = 169
Score = 23.4 bits (48), Expect = 1.9
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 562 FSESSMNPTAAAIAYG 609
FS S +PTAA I+YG
Sbjct: 117 FSTCSSHPTAAFISYG 132
>S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor
protein.
Length = 168
Score = 23.4 bits (48), Expect = 1.9
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 562 FSESSMNPTAAAIAYG 609
FS S +PTAA I+YG
Sbjct: 116 FSTCSSHPTAAFISYG 131
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 1.9
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +3
Query: 384 RQNLFPRGSQFHGAYENEGNCRSLSWQNCAECSLSRFPRTSMTLKDK 524
R F R S H YE+ + S++N E S SR KD+
Sbjct: 220 RSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSREYKKKDR 266
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 1.9
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +3
Query: 384 RQNLFPRGSQFHGAYENEGNCRSLSWQNCAECSLSRFPRTSMTLKDK 524
R F R S H YE+ + S++N E S SR KD+
Sbjct: 220 RSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSREYKKKDR 266
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 1.9
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +3
Query: 384 RQNLFPRGSQFHGAYENEGNCRSLSWQNCAECSLSRFPRTSMTLKDK 524
R F R S H YE+ + S++N E S SR KD+
Sbjct: 220 RSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSREYKKKDR 266
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.4 bits (48), Expect = 1.9
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +3
Query: 384 RQNLFPRGSQFHGAYENEGNCRSLSWQNCAECSLSRFPRTSMTLKDK 524
R F R S H YE+ + S++N E S SR KD+
Sbjct: 220 RSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSREYKKKDR 266
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 4.5
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +3
Query: 384 RQNLFPRGSQFHGAYENEGNCRSLSWQNCAECSLSRFPRTSMTLKDK 524
R F R S H YE+ + S++N E S SR KD+
Sbjct: 220 RSRSFQRTSSCHSRYEDLRHEDRNSYRNDGERSCSRDRSREYKKKDR 266
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.8 bits (44), Expect = 5.9
Identities = 9/32 (28%), Positives = 14/32 (43%)
Frame = -3
Query: 513 ESLKYAGTVINCILHSFAKISFGSFLHFRKHH 418
+++ GT NCI+ A + L HH
Sbjct: 289 DAVPLLGTYFNCIMFMVASSVVSTILILNYHH 320
>AB208108-1|BAE72140.1| 92|Apis mellifera Broad complex zinc
finger domain-Z3 isoform protein.
Length = 92
Score = 21.8 bits (44), Expect = 5.9
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = -2
Query: 58 PFCIFNQSCYLFLKK 14
P+C N SCY LK+
Sbjct: 9 PYCRRNFSCYYSLKR 23
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,738
Number of Sequences: 438
Number of extensions: 3980
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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