Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0931
(649 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0093 + 702223-702348,703434-703556,703646-703702,703797-70... 185 3e-47
07_03_1141 - 24264534-24264635,24265542-24265616,24265709-242657... 178 3e-45
03_06_0030 + 31161821-31161927,31163700-31163934,31164064-311648... 169 1e-42
12_02_0477 + 19503678-19503803,19504381-19504422,19504631-195046... 143 1e-41
07_01_0904 + 7609863-7610198,7610320-7610415,7610564-7610659 56 3e-08
07_03_0434 + 18175560-18175695,18176068-18176177,18176553-181766... 31 1.0
08_02_0861 - 21974524-21975224,21975307-21975467,21975563-21976695 29 2.4
08_02_0733 + 20546072-20546325,20546924-20547017,20547441-205476... 29 2.4
05_01_0478 - 3910575-3912989 29 2.4
11_06_0437 - 23533218-23536382 29 4.2
11_01_0673 - 5491694-5493102,5493386-5493995 29 4.2
07_01_0622 - 4625246-4627759 28 5.6
03_05_1012 + 29670310-29670512,29670856-29671001,29671169-296712... 28 5.6
02_02_0354 + 9283886-9285505,9287158-9287251,9287817-9289915 28 5.6
08_02_0749 - 20769224-20770535,20770649-20771510,20771622-207732... 28 7.4
03_02_0910 + 12317493-12317960,12319678-12319734,12320592-123206... 28 7.4
02_05_0250 + 27153048-27154453,27154546-27154885 28 7.4
11_04_0228 + 15105752-15105921,15106774-15106919,15107369-151074... 27 9.7
02_05_0664 + 30717551-30719491 27 9.7
>07_01_0093 +
702223-702348,703434-703556,703646-703702,703797-703871,
704105-704212
Length = 162
Score = 185 bits (450), Expect = 3e-47
Identities = 80/150 (53%), Positives = 112/150 (74%), Gaps = 2/150 (1%)
Frame = +1
Query: 67 HTSRTGHSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIF 246
H +GAS T+P Q +RKNG++++K RPCK+VE+STSKTGKHGHAK H VGIDIF
Sbjct: 8 HFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVGIDIF 67
Query: 247 NGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP-DGDLATQ 423
NGKK EDI PS+HN DVPHV R DYQL DIS+DG+++L+ ++G+ ++DL++P D L Q
Sbjct: 68 NGKKLEDIVPSSHNCDVPHVDRTDYQLIDISEDGFVSLLTESGNTKDDLRLPTDDTLTNQ 127
Query: 424 LRTDF-DSGKELLCTVLKSCGEECVIPSKQ 510
++ F + GK+++ TV+ + GEE + K+
Sbjct: 128 IKNGFGEEGKDMILTVMSAMGEEQICAVKE 157
>07_03_1141 -
24264534-24264635,24265542-24265616,24265709-24265765,
24265903-24266025,24266509-24266520,24267014-24267157,
24267606-24267626
Length = 177
Score = 178 bits (434), Expect = 3e-45
Identities = 80/152 (52%), Positives = 110/152 (72%), Gaps = 5/152 (3%)
Frame = +1
Query: 67 HTSRTGHSGASATFPMQCSALRKNGFVMLKGRPCK----IVEMSTSKTGKHGHAKVHLVG 234
H +GAS T+P Q +RKNG++++K RPCK +VE+STSKTGKHGHAK H V
Sbjct: 21 HFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKGFGKVVEVSTSKTGKHGHAKCHFVA 80
Query: 235 IDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP-DGD 411
IDIFNGKK EDI PS+HN DVPHV R +YQL DIS+DG+++L+ ++G+ ++DL++P D
Sbjct: 81 IDIFNGKKLEDIVPSSHNCDVPHVNRTEYQLIDISEDGFVSLLTESGNTKDDLRLPTDDS 140
Query: 412 LATQLRTDFDSGKELLCTVLKSCGEECVIPSK 507
L Q++T F GK+L+ TV+ + GEE + K
Sbjct: 141 LLGQIKTGFGEGKDLVVTVMSAMGEEQICALK 172
>03_06_0030 + 31161821-31161927,31163700-31163934,31164064-31164826,
31165816-31167650,31169294-31169424,31169993-31170075,
31170426-31170680,31171125-31171220,31171695-31171775,
31171811-31171968,31172434-31172534,31172614-31172629,
31173390-31173439,31174558-31174588,31175156-31175305,
31176135-31176173,31176288-31176410,31176496-31176552,
31176837-31176911,31177003-31177107
Length = 1496
Score = 169 bits (412), Expect = 1e-42
Identities = 81/161 (50%), Positives = 108/161 (67%), Gaps = 14/161 (8%)
Frame = +1
Query: 67 HTSRTGHSGASATFPMQCSALRKNGFVMLKGRPCK-------------IVEMSTSKTGKH 207
H +GAS T+P Q +RKNG +++K RPCK +VE+STSKTGKH
Sbjct: 1330 HFESKADAGASKTYPQQAGTIRKNGHIVIKNRPCKWSGNHASLLVDTKVVEVSTSKTGKH 1389
Query: 208 GHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLRE 387
GHAK H V IDIFNGKK EDI PS+HN DVPHV R DYQL DIS+DG+++L+ ++G ++
Sbjct: 1390 GHAKCHFVAIDIFNGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTESGGTKD 1449
Query: 388 DLKIP-DGDLATQLRTDFDSGKELLCTVLKSCGEECVIPSK 507
DL++P D L TQ++ F GK+L+ TV+ + GEE + K
Sbjct: 1450 DLRLPSDEALLTQIKDGFAEGKDLIVTVMSAMGEEQICALK 1490
>12_02_0477 +
19503678-19503803,19504381-19504422,19504631-19504684,
19504946-19505068,19505154-19505210,19505299-19505373,
19505925-19506026
Length = 192
Score = 143 bits (346), Expect(2) = 1e-41
Identities = 63/114 (55%), Positives = 87/114 (76%), Gaps = 1/114 (0%)
Frame = +1
Query: 169 KIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDG 348
K+VE+STSKTGKHGHAK H V IDIF KK EDI PS+HN DVPHV R +YQL DIS+DG
Sbjct: 74 KVVEVSTSKTGKHGHAKCHFVAIDIFTAKKLEDIVPSSHNCDVPHVNRTEYQLIDISEDG 133
Query: 349 YLTLMADNGDLREDLKIP-DGDLATQLRTDFDSGKELLCTVLKSCGEECVIPSK 507
+++L+ +NG+ ++DL++P D +L +Q++ F GK+L+ TV+ + GEE + K
Sbjct: 134 FVSLLTENGNTKDDLRLPTDDNLLSQIKDGFGEGKDLVVTVMSAMGEEQICALK 187
Score = 44.8 bits (101), Expect(2) = 1e-41
Identities = 16/35 (45%), Positives = 23/35 (65%)
Frame = +1
Query: 67 HTSRTGHSGASATFPMQCSALRKNGFVMLKGRPCK 171
H +GAS T+P Q +RKNG++++K RPCK
Sbjct: 8 HFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCK 42
>07_01_0904 + 7609863-7610198,7610320-7610415,7610564-7610659
Length = 175
Score = 55.6 bits (128), Expect = 3e-08
Identities = 25/63 (39%), Positives = 45/63 (71%), Gaps = 2/63 (3%)
Frame = +1
Query: 301 HVKREDYQLTDISDDG-YLTLMADNGDLREDLKIPDGD-LATQLRTDFDSGKELLCTVLK 474
H+ R +YQL DIS+DG +++L+ ++G+ ++DL +P D L Q++T F GK+++ TV+
Sbjct: 46 HMNRTNYQLIDISEDGLFVSLLTESGNTKDDLGLPTYDNLLGQIKTGFGEGKDVVVTVMS 105
Query: 475 SCG 483
+ G
Sbjct: 106 AMG 108
>07_03_0434 +
18175560-18175695,18176068-18176177,18176553-18176616,
18176839-18176915,18177152-18177223,18178337-18178456
Length = 192
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +1
Query: 292 DVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGD 411
D P+ RE +++ ++ D Y+T D+G L ED+K+ G+
Sbjct: 38 DFPNFIREGFEVKVVTSDNYIT--RDSGLLYEDIKVGTGN 75
>08_02_0861 - 21974524-21975224,21975307-21975467,21975563-21976695
Length = 664
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 400 PDGDLATQLRTDFDSGKELLCTVLKSCGE 486
PDGDL ++R +SGKEL L G+
Sbjct: 206 PDGDLKDKMRDAMESGKELTSNALALIGK 234
>08_02_0733 +
20546072-20546325,20546924-20547017,20547441-20547624,
20547722-20547831,20548328-20548423,20548525-20548679,
20548743-20548986,20549159-20549314,20549600-20549829,
20552213-20552316,20552420-20552505,20552776-20553066,
20553383-20553475,20553640-20553735,20553838-20553939,
20554196-20554266,20554784-20555035,20555786-20556529,
20557038-20557119,20557192-20557347,20557446-20557655,
20558282-20558665
Length = 1397
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +1
Query: 73 SRTGHSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGID 240
+R G SG+ + + SA+ ++ F + + K+VEM ++ K + KVH G D
Sbjct: 540 ARQGTSGSKCS--LWLSAIVRHMFTLYDFKLAKLVEMESALEDKSKNVKVHAEGYD 593
>05_01_0478 - 3910575-3912989
Length = 804
Score = 29.5 bits (63), Expect = 2.4
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = -3
Query: 596 IYVRVVH-CKKLKVCXPYKCSVGLFVEXCVCFDGXTHSSPQDF 471
+Y + V C C P+ GL C C + + SPQD+
Sbjct: 303 VYTQPVSPCTAYATCGPFTICKGLANPVCSCMESFSQKSPQDW 345
>11_06_0437 - 23533218-23536382
Length = 1054
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 211 HAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDG 348
HA LV + I N +K DI D+ H K+E Y+L + G
Sbjct: 179 HACRKLVDLVIKNKEKTADIENKEKKADIEHKKKEPYKLAIVGTGG 224
>11_01_0673 - 5491694-5493102,5493386-5493995
Length = 672
Score = 28.7 bits (61), Expect = 4.2
Identities = 16/72 (22%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = -3
Query: 575 CKKLKVCXPYKCSVGLFVEXCVCFDGXTHSSPQDFSTVHNNSLPLSKSVRNCVA-RSPSG 399
C C P+ G + C C + + SPQD+ ++ + + +C + RS +
Sbjct: 240 CTPFATCGPFGICNGNSEQFCDCMESFSQKSPQDWKLKDRSAGCIRNTPLDCPSNRSSTD 299
Query: 398 ILRSSRRSPLSA 363
+ ++ R L A
Sbjct: 300 MFQTIARVTLPA 311
>07_01_0622 - 4625246-4627759
Length = 837
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/35 (34%), Positives = 16/35 (45%)
Frame = -3
Query: 575 CKKLKVCXPYKCSVGLFVEXCVCFDGXTHSSPQDF 471
C VC P+ G V C C + + SPQD+
Sbjct: 328 CSLHDVCGPFTVCNGNSVPFCGCMESFSPKSPQDW 362
>03_05_1012 +
29670310-29670512,29670856-29671001,29671169-29671245,
29671329-29671451,29671558-29671660,29672100-29672173,
29672249-29672329,29672411-29672563,29672780-29672881
Length = 353
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -2
Query: 315 FALHVGYVHVV-CGGTDIFILFTIEDINPNQVNFSVAVLSGFGCGHFNNLAW 163
F L GY+ + GT++F F + NP+ + ++ G C F+ LA+
Sbjct: 63 FYLETGYIGIEEKTGTELFYYFVESETNPDTDPLVLWLVGGPRCSAFSGLAY 114
>02_02_0354 + 9283886-9285505,9287158-9287251,9287817-9289915
Length = 1270
Score = 28.3 bits (60), Expect = 5.6
Identities = 25/91 (27%), Positives = 43/91 (47%)
Frame = -2
Query: 480 AGFQHGAQQFLAAVEVSTQLCGEVTIRDFEVLTQVTVVSHQGQVAIIRDISQLVVFALHV 301
AG H ++ FLA ++ T + E +++ VL+ +T ++ V D L V V
Sbjct: 1038 AGTHHTSKPFLAPLKELT-IYSESSVQSMAVLSSLTSLTRLRLV----DCDNLTV----V 1088
Query: 300 GYVHVVCGGTDIFILFTIEDINPNQVNFSVA 208
G+ V+ G +++ DI+ N SVA
Sbjct: 1089 GFDPVMTGSLSELVIYNKPDIDDNNHRCSVA 1119
>08_02_0749 -
20769224-20770535,20770649-20771510,20771622-20773263,
20773357-20773701,20773858-20773952,20774218-20774344,
20774430-20774435
Length = 1462
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +1
Query: 151 LKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDI 270
LK + V+ TSK G+ GH KV V ++ KK D+
Sbjct: 679 LKNQDLLDVDSGTSKIGQSGHDKVEHVTNELSISKKAADV 718
>03_02_0910 +
12317493-12317960,12319678-12319734,12320592-12320666,
12321219-12321299,12321472-12321546,12321818-12321862,
12321975-12322064,12322153-12322254,12322366-12322420,
12324966-12325027,12325521-12325555,12325877-12326115,
12326219-12328035
Length = 1066
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = +1
Query: 262 EDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLRED--LKIPDGDLATQLRTD 435
E+I P+ + MD+ + E Y + I+++ + GD+ + L +P+ +L +
Sbjct: 571 EEIPPNANGMDIDSDREETYNVEGIAENSEDCRVRGGGDIDTECNLSLPEHELPLHQESK 630
Query: 436 FDS 444
DS
Sbjct: 631 SDS 633
>02_05_0250 + 27153048-27154453,27154546-27154885
Length = 581
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +1
Query: 364 ADNGDLREDLKIPDGDLATQLRTDFDSGKELLCTVLKSCGEEC--VIPSKQTQ 516
A GD DL IPD + TQ+ T+ S C V S G C +P+ ++
Sbjct: 248 ASTGDRSVDLPIPDNETNTQI-TEMRSNGAEKCDVQLSGGTLCSEAVPASNSE 299
>11_04_0228 +
15105752-15105921,15106774-15106919,15107369-15107448,
15107598-15107720,15107814-15107906
Length = 203
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = -2
Query: 315 FALHVGYVHV-VCGGTDIFILFTIEDINPNQVNFSVAVLSGFGCGHFNNLA 166
F+L GYV V G +F F + NP+ + + G GC + LA
Sbjct: 52 FSLETGYVEVNESTGVQLFYYFVRSEKNPDLDPLLLWLTGGPGCSSISGLA 102
>02_05_0664 + 30717551-30719491
Length = 646
Score = 27.5 bits (58), Expect = 9.7
Identities = 10/34 (29%), Positives = 17/34 (50%)
Frame = +1
Query: 205 HGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHV 306
HG+ L+ D+ G D+ HNM++ H+
Sbjct: 385 HGYLVRRLLDTDVIQGSALVDMYGKCHNMELAHI 418
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,240,620
Number of Sequences: 37544
Number of extensions: 374987
Number of successful extensions: 1119
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1113
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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