Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0931
(649 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF187730-1|AAG17032.1| 159|Drosophila melanogaster eukaryotic t... 257 8e-69
AY071396-1|AAL49018.1| 159|Drosophila melanogaster RE47768p pro... 256 2e-68
AF159443-1|AAF80375.1| 159|Drosophila melanogaster eukaryotic i... 256 2e-68
AE013599-3794|AAM68297.1| 159|Drosophila melanogaster CG3186-PB... 256 2e-68
AE013599-3793|AAF47151.1| 159|Drosophila melanogaster CG3186-PA... 256 2e-68
M28863-1|AAA62770.1| 543|Drosophila melanogaster seven-up prote... 30 2.4
AY129452-1|AAM76194.1| 543|Drosophila melanogaster RE08410p pro... 30 2.4
AE014297-1474|AAN13541.1| 746|Drosophila melanogaster CG11502-P... 30 2.4
AE014297-1473|AAF54773.1| 543|Drosophila melanogaster CG11502-P... 30 2.4
AY094788-1|AAM11141.1| 1521|Drosophila melanogaster LD15253p pro... 29 7.2
AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends l... 29 7.2
AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP mot... 29 7.2
AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends p... 29 7.2
AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,... 29 7.2
AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,... 29 7.2
AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,... 29 7.2
>AF187730-1|AAG17032.1| 159|Drosophila melanogaster eukaryotic
translation initiationfactor 5a protein.
Length = 159
Score = 257 bits (630), Expect = 8e-69
Identities = 117/143 (81%), Positives = 128/143 (89%)
Frame = +1
Query: 79 TGHSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKK 258
T SGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+VGIDIF+ KK
Sbjct: 10 TTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGIDIFSNKK 69
Query: 259 YEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLATQLRTDF 438
YEDICPSTHNMDVP+VKRED QL ISDD +LTLM D+GDLREDLK+P+G+L QLR DF
Sbjct: 70 YEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTDSGDLREDLKVPEGELGEQLRLDF 129
Query: 439 DSGKELLCTVLKSCGEECVIPSK 507
DSGK+LLCTVLK+CGEECVI K
Sbjct: 130 DSGKDLLCTVLKACGEECVIAIK 152
>AY071396-1|AAL49018.1| 159|Drosophila melanogaster RE47768p
protein.
Length = 159
Score = 256 bits (626), Expect = 2e-68
Identities = 116/143 (81%), Positives = 128/143 (89%)
Frame = +1
Query: 79 TGHSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKK 258
T SGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+VGIDIF+ KK
Sbjct: 10 TTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGIDIFSNKK 69
Query: 259 YEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLATQLRTDF 438
YEDICPSTHNMDVP+VKRED QL ISDD +LTLM ++GDLREDLK+P+G+L QLR DF
Sbjct: 70 YEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRLDF 129
Query: 439 DSGKELLCTVLKSCGEECVIPSK 507
DSGK+LLCTVLK+CGEECVI K
Sbjct: 130 DSGKDLLCTVLKACGEECVIAIK 152
>AF159443-1|AAF80375.1| 159|Drosophila melanogaster eukaryotic
initiation factor 5A protein.
Length = 159
Score = 256 bits (626), Expect = 2e-68
Identities = 116/143 (81%), Positives = 128/143 (89%)
Frame = +1
Query: 79 TGHSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKK 258
T SGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+VGIDIF+ KK
Sbjct: 10 TTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGIDIFSNKK 69
Query: 259 YEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLATQLRTDF 438
YEDICPSTHNMDVP+VKRED QL ISDD +LTLM ++GDLREDLK+P+G+L QLR DF
Sbjct: 70 YEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRLDF 129
Query: 439 DSGKELLCTVLKSCGEECVIPSK 507
DSGK+LLCTVLK+CGEECVI K
Sbjct: 130 DSGKDLLCTVLKACGEECVIAIK 152
>AE013599-3794|AAM68297.1| 159|Drosophila melanogaster CG3186-PB,
isoform B protein.
Length = 159
Score = 256 bits (626), Expect = 2e-68
Identities = 116/143 (81%), Positives = 128/143 (89%)
Frame = +1
Query: 79 TGHSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKK 258
T SGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+VGIDIF+ KK
Sbjct: 10 TTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGIDIFSNKK 69
Query: 259 YEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLATQLRTDF 438
YEDICPSTHNMDVP+VKRED QL ISDD +LTLM ++GDLREDLK+P+G+L QLR DF
Sbjct: 70 YEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRLDF 129
Query: 439 DSGKELLCTVLKSCGEECVIPSK 507
DSGK+LLCTVLK+CGEECVI K
Sbjct: 130 DSGKDLLCTVLKACGEECVIAIK 152
>AE013599-3793|AAF47151.1| 159|Drosophila melanogaster CG3186-PA,
isoform A protein.
Length = 159
Score = 256 bits (626), Expect = 2e-68
Identities = 116/143 (81%), Positives = 128/143 (89%)
Frame = +1
Query: 79 TGHSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKK 258
T SGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+VGIDIF+ KK
Sbjct: 10 TTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGIDIFSNKK 69
Query: 259 YEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLATQLRTDF 438
YEDICPSTHNMDVP+VKRED QL ISDD +LTLM ++GDLREDLK+P+G+L QLR DF
Sbjct: 70 YEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRLDF 129
Query: 439 DSGKELLCTVLKSCGEECVIPSK 507
DSGK+LLCTVLK+CGEECVI K
Sbjct: 130 DSGKDLLCTVLKACGEECVIAIK 152
>M28863-1|AAA62770.1| 543|Drosophila melanogaster seven-up protein
type 1 protein.
Length = 543
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 188 HPKPESTATLKFTWLGLISSMVKSMKISVPPHTTWTYP 301
+P+P+S A L +GL +SM + VPPH+ W P
Sbjct: 13 NPRPQSGAELSAFDIGLS----RSMGLGVPPHSAWHEP 46
>AY129452-1|AAM76194.1| 543|Drosophila melanogaster RE08410p
protein.
Length = 543
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 188 HPKPESTATLKFTWLGLISSMVKSMKISVPPHTTWTYP 301
+P+P+S A L +GL +SM + VPPH+ W P
Sbjct: 13 NPRPQSGAELSAFDIGLS----RSMGLGVPPHSAWHEP 46
>AE014297-1474|AAN13541.1| 746|Drosophila melanogaster CG11502-PA,
isoform A protein.
Length = 746
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 188 HPKPESTATLKFTWLGLISSMVKSMKISVPPHTTWTYP 301
+P+P+S A L +GL +SM + VPPH+ W P
Sbjct: 13 NPRPQSGAELSAFDIGLS----RSMGLGVPPHSAWHEP 46
>AE014297-1473|AAF54773.1| 543|Drosophila melanogaster CG11502-PB,
isoform B protein.
Length = 543
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 188 HPKPESTATLKFTWLGLISSMVKSMKISVPPHTTWTYP 301
+P+P+S A L +GL +SM + VPPH+ W P
Sbjct: 13 NPRPQSGAELSAFDIGLS----RSMGLGVPPHSAWHEP 46
>AY094788-1|AAM11141.1| 1521|Drosophila melanogaster LD15253p
protein.
Length = 1521
Score = 28.7 bits (61), Expect = 7.2
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -3
Query: 485 SPQDFSTVHNNSLPLSKSVRNCVARSPSGILRSSRR 378
+P+D VHN + L++ V C + G++ +R
Sbjct: 564 TPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 599
>AF221715-1|AAF34661.1| 5554|Drosophila melanogaster split ends long
isoform protein.
Length = 5554
Score = 28.7 bits (61), Expect = 7.2
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -3
Query: 485 SPQDFSTVHNNSLPLSKSVRNCVARSPSGILRSSRR 378
+P+D VHN + L++ V C + G++ +R
Sbjct: 1042 TPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 1077
>AF188205-1|AAF13218.1| 5533|Drosophila melanogaster Spen RNP motif
protein long isoformprotein.
Length = 5533
Score = 28.7 bits (61), Expect = 7.2
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -3
Query: 485 SPQDFSTVHNNSLPLSKSVRNCVARSPSGILRSSRR 378
+P+D VHN + L++ V C + G++ +R
Sbjct: 1048 TPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 1083
>AF184612-1|AAF26299.1| 5476|Drosophila melanogaster split ends
protein.
Length = 5476
Score = 28.7 bits (61), Expect = 7.2
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -3
Query: 485 SPQDFSTVHNNSLPLSKSVRNCVARSPSGILRSSRR 378
+P+D VHN + L++ V C + G++ +R
Sbjct: 991 TPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 1026
>AE014134-58|AAN10511.1| 5476|Drosophila melanogaster CG18497-PC,
isoform C protein.
Length = 5476
Score = 28.7 bits (61), Expect = 7.2
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -3
Query: 485 SPQDFSTVHNNSLPLSKSVRNCVARSPSGILRSSRR 378
+P+D VHN + L++ V C + G++ +R
Sbjct: 991 TPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 1026
>AE014134-57|AAF51534.2| 5533|Drosophila melanogaster CG18497-PB,
isoform B protein.
Length = 5533
Score = 28.7 bits (61), Expect = 7.2
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -3
Query: 485 SPQDFSTVHNNSLPLSKSVRNCVARSPSGILRSSRR 378
+P+D VHN + L++ V C + G++ +R
Sbjct: 1048 TPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 1083
>AE014134-56|AAF51535.2| 5560|Drosophila melanogaster CG18497-PA,
isoform A protein.
Length = 5560
Score = 28.7 bits (61), Expect = 7.2
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = -3
Query: 485 SPQDFSTVHNNSLPLSKSVRNCVARSPSGILRSSRR 378
+P+D VHN + L++ V C + G++ +R
Sbjct: 1048 TPKDLHPVHNQRIQLAEQVEECPSSGDEGVVSPRKR 1083
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,188,628
Number of Sequences: 53049
Number of extensions: 637955
Number of successful extensions: 1738
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1738
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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