Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0931
         (649 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49967-1|CAA90247.1|  161|Caenorhabditis elegans Hypothetical pr...   182   2e-46
Z27079-13|CAA81597.2|  195|Caenorhabditis elegans Hypothetical p...   179   1e-45
CU457743-2|CAM36365.1|  695|Caenorhabditis elegans Hypothetical ...    33   0.23 
Z74031-2|CAA98454.2|  568|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z70310-6|CAE17904.1|  293|Caenorhabditis elegans Hypothetical pr...    28   5.0  
AC006625-13|ABI18147.1|  273|Caenorhabditis elegans Abnormal che...    28   6.6  
AC006625-12|AAK68272.2|  214|Caenorhabditis elegans Abnormal che...    28   6.6  
U80445-11|AAB37801.2|  479|Caenorhabditis elegans Hypothetical p...    27   8.7  

>Z49967-1|CAA90247.1|  161|Caenorhabditis elegans Hypothetical
           protein F54C9.1 protein.
          Length = 161

 Score =  182 bits (443), Expect = 2e-46
 Identities = 89/150 (59%), Positives = 110/150 (73%), Gaps = 2/150 (1%)
 Frame = +1

Query: 55  HRRTHTSRTGHSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVG 234
           H       TG SGA+ATFP QCSALRKN  VM+KGRPCKIVEMSTSKTGKHGHAKVH+V 
Sbjct: 5   HHDDEHFHTGDSGAAATFPKQCSALRKNEHVMIKGRPCKIVEMSTSKTGKHGHAKVHMVA 64

Query: 235 IDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLM-ADNGDLREDLKIPDGD 411
           IDIF  KK EDICPSTHNMDVP VKR +Y L  I DDGY +LM  ++ + ++DLK+PD +
Sbjct: 65  IDIFTSKKLEDICPSTHNMDVPVVKRREYLLMAI-DDGYCSLMDPESCEQKDDLKLPDTE 123

Query: 412 LATQLRTDFDSGK-ELLCTVLKSCGEECVI 498
           L  Q+R  ++  +  +L  V+ + GEE ++
Sbjct: 124 LGQQIRDAYEKDEGSVLVQVVSAIGEEAIL 153


>Z27079-13|CAA81597.2|  195|Caenorhabditis elegans Hypothetical
           protein T05G5.10 protein.
          Length = 195

 Score =  179 bits (436), Expect = 1e-45
 Identities = 86/145 (59%), Positives = 110/145 (75%), Gaps = 2/145 (1%)
 Frame = +1

Query: 79  TGHSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKK 258
           +  SGA+ATFP QCSALRKN  VM++GRPCKIVEMSTSKTGKHGHAKVH+V IDIF  KK
Sbjct: 47  SAESGAAATFPKQCSALRKNEHVMIRGRPCKIVEMSTSKTGKHGHAKVHMVAIDIFTTKK 106

Query: 259 YEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLM-ADNGDLREDLKIPDGDLATQLRTD 435
            EDICPSTHNMDVP VKR +Y L  I +DG+ +LM  ++ +L++DLK+P+GDL   +R  
Sbjct: 107 LEDICPSTHNMDVPVVKRREYILMSI-EDGFCSLMDPESCELKDDLKMPEGDLGNTIREA 165

Query: 436 FDSGK-ELLCTVLKSCGEECVIPSK 507
            +  +  +L  V+ +CGEE ++  K
Sbjct: 166 LEKDEGSVLVQVVAACGEEAILGYK 190


>CU457743-2|CAM36365.1|  695|Caenorhabditis elegans Hypothetical
           protein K09E10.2 protein.
          Length = 695

 Score = 32.7 bits (71), Expect = 0.23
 Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
 Frame = +1

Query: 286 NMDVPHVKREDYQLTDI--SDDGYLTLMADNGDLREDLKIPDGDLATQLRTD-FDSGKEL 456
           N  +P +K++ Y L     ++ GY+  +   GDL+   KI D   A  LR D ++ G+  
Sbjct: 573 NKFIPFIKKKLYILDSFPRANSGYIARVP--GDLKNGKKIEDISKA-MLRPDGYERGRLR 629

Query: 457 LCTVLKSCGEEC 492
              ++K CG++C
Sbjct: 630 HAALVKECGDKC 641


>Z74031-2|CAA98454.2|  568|Caenorhabditis elegans Hypothetical
           protein F32D8.2 protein.
          Length = 568

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
 Frame = +1

Query: 241 IFNGKKYEDICPSTHNMDVPHVKREDYQLT------DISDDGYLTLMADN-GDLREDLK 396
           IF   + ED+   T +    H+ R + ++       D+S DGYLTL + N  DL  D++
Sbjct: 74  IFFPNEDEDVFGLTPDKSKQHIVRGECKINELNEKVDLSSDGYLTLRSKNTNDLPSDIR 132


>Z70310-6|CAE17904.1|  293|Caenorhabditis elegans Hypothetical
           protein R11A8.8 protein.
          Length = 293

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 12/39 (30%), Positives = 20/39 (51%)
 Frame = +1

Query: 346 GYLTLMADNGDLREDLKIPDGDLATQLRTDFDSGKELLC 462
           GYL      GD ++++K+ +G    Q+ +D D  K   C
Sbjct: 251 GYLPQQPKKGDKKKNIKLKEGRTEHQIVSDIDPAKLRAC 289


>AC006625-13|ABI18147.1|  273|Caenorhabditis elegans Abnormal
           chemotaxis protein 1,isoform b protein.
          Length = 273

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
 Frame = +1

Query: 34  QNTTLGVHRRTHTSRTGHSGASATFPM-QCSALRKNGFVMLKGRP--CKIVEMSTSKTGK 204
           Q+++L  HRRTHT    +  A         S L K+       +P  C I  M  +++G 
Sbjct: 205 QSSSLVTHRRTHTGERPYPCAQCEKAFTDSSTLTKHLRTHTGHKPYVCSICMMKFTQSGN 264

Query: 205 -HGHAKVH 225
            H H K H
Sbjct: 265 LHRHMKTH 272


>AC006625-12|AAK68272.2|  214|Caenorhabditis elegans Abnormal
           chemotaxis protein 1,isoform a protein.
          Length = 214

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
 Frame = +1

Query: 34  QNTTLGVHRRTHTSRTGHSGASATFPM-QCSALRKNGFVMLKGRP--CKIVEMSTSKTGK 204
           Q+++L  HRRTHT    +  A         S L K+       +P  C I  M  +++G 
Sbjct: 146 QSSSLVTHRRTHTGERPYPCAQCEKAFTDSSTLTKHLRTHTGHKPYVCSICMMKFTQSGN 205

Query: 205 -HGHAKVH 225
            H H K H
Sbjct: 206 LHRHMKTH 213


>U80445-11|AAB37801.2|  479|Caenorhabditis elegans Hypothetical
           protein C50F2.8 protein.
          Length = 479

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 23/78 (29%), Positives = 36/78 (46%)
 Frame = -2

Query: 408 TIRDFEVLTQVTVVSHQGQVAIIRDISQLVVFALHVGYVHVVCGGTDIFILFTIEDINPN 229
           T  D   LTQV V  H GQ+ ++  I++   + L  G V     G D++    IE++   
Sbjct: 137 TTVDAGQLTQVEVEKHGGQL-VVTKINEKSNYDLKPGDVITQVDGKDVYFRADIENLK-G 194

Query: 228 QVNFSVAVLSGFGCGHFN 175
           +V  +V   +G  C   N
Sbjct: 195 KVELTVEP-AGIHCAPAN 211


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,844,508
Number of Sequences: 27780
Number of extensions: 324592
Number of successful extensions: 878
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 878
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)