Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0928
(450 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X iso... 228 8e-60
CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein. 228 8e-60
BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein. 228 8e-60
BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein. 228 8e-60
BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4, X... 228 8e-60
BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4, X... 228 8e-60
AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4, X... 228 8e-60
AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X ... 228 8e-60
BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein. 225 5e-59
M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y iso... 222 4e-58
BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein. 222 4e-58
BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4, Y... 222 4e-58
BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4, Y... 222 4e-58
AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4, Y... 222 4e-58
AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y ... 222 4e-58
M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar prot... 219 4e-57
AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4 pr... 214 1e-55
Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4 prot... 62 8e-10
AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein. 32 0.79
AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens ... 31 1.8
AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens ... 30 4.2
AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta ch... 30 4.2
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 30 4.2
>M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X
isoform protein.
Length = 263
Score = 228 bits (557), Expect = 8e-60
Identities = 105/142 (73%), Positives = 116/142 (81%)
Frame = +2
Query: 23 PKHGCWTNLAVCMHRVPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDG 202
PKH L PSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 203 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 382
KVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 383 NVPYLVTHDGRTIRYPDPLIKV 448
+P+LVTHD RTIRYPDPLIKV
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKV 156
Score = 41.1 bits (92), Expect = 0.002
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1
Query: 1 HLKRLNAPKAWMLDKLGGVYAP 66
HLKR+ APK WMLDKL GV+AP
Sbjct: 8 HLKRVAAPKHWMLDKLTGVFAP 29
>CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein.
Length = 263
Score = 228 bits (557), Expect = 8e-60
Identities = 105/142 (73%), Positives = 116/142 (81%)
Frame = +2
Query: 23 PKHGCWTNLAVCMHRVPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDG 202
PKH L PSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 203 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 382
KVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 383 NVPYLVTHDGRTIRYPDPLIKV 448
+P+LVTHD RTIRYPDPLIKV
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKV 156
Score = 41.1 bits (92), Expect = 0.002
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1
Query: 1 HLKRLNAPKAWMLDKLGGVYAP 66
HLKR+ APK WMLDKL GV+AP
Sbjct: 8 HLKRVAAPKHWMLDKLTGVFAP 29
>BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 228 bits (557), Expect = 8e-60
Identities = 105/142 (73%), Positives = 116/142 (81%)
Frame = +2
Query: 23 PKHGCWTNLAVCMHRVPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDG 202
PKH L PSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 203 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 382
KVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 383 NVPYLVTHDGRTIRYPDPLIKV 448
+P+LVTHD RTIRYPDPLIKV
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKV 156
Score = 41.1 bits (92), Expect = 0.002
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1
Query: 1 HLKRLNAPKAWMLDKLGGVYAP 66
HLKR+ APK WMLDKL GV+AP
Sbjct: 8 HLKRVAAPKHWMLDKLTGVFAP 29
>BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 228 bits (557), Expect = 8e-60
Identities = 105/142 (73%), Positives = 116/142 (81%)
Frame = +2
Query: 23 PKHGCWTNLAVCMHRVPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDG 202
PKH L PSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 203 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 382
KVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 383 NVPYLVTHDGRTIRYPDPLIKV 448
+P+LVTHD RTIRYPDPLIKV
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKV 156
Score = 41.1 bits (92), Expect = 0.002
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1
Query: 1 HLKRLNAPKAWMLDKLGGVYAP 66
HLKR+ APK WMLDKL GV+AP
Sbjct: 8 HLKRVAAPKHWMLDKLTGVFAP 29
>BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 228 bits (557), Expect = 8e-60
Identities = 105/142 (73%), Positives = 116/142 (81%)
Frame = +2
Query: 23 PKHGCWTNLAVCMHRVPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDG 202
PKH L PSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 203 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 382
KVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 383 NVPYLVTHDGRTIRYPDPLIKV 448
+P+LVTHD RTIRYPDPLIKV
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKV 156
Score = 41.1 bits (92), Expect = 0.002
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1
Query: 1 HLKRLNAPKAWMLDKLGGVYAP 66
HLKR+ APK WMLDKL GV+AP
Sbjct: 8 HLKRVAAPKHWMLDKLTGVFAP 29
>BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 228 bits (557), Expect = 8e-60
Identities = 105/142 (73%), Positives = 116/142 (81%)
Frame = +2
Query: 23 PKHGCWTNLAVCMHRVPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDG 202
PKH L PSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 203 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 382
KVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 383 NVPYLVTHDGRTIRYPDPLIKV 448
+P+LVTHD RTIRYPDPLIKV
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKV 156
Score = 41.1 bits (92), Expect = 0.002
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1
Query: 1 HLKRLNAPKAWMLDKLGGVYAP 66
HLKR+ APK WMLDKL GV+AP
Sbjct: 8 HLKRVAAPKHWMLDKLTGVFAP 29
>AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4,
X-linked X isoform variant protein.
Length = 263
Score = 228 bits (557), Expect = 8e-60
Identities = 105/142 (73%), Positives = 116/142 (81%)
Frame = +2
Query: 23 PKHGCWTNLAVCMHRVPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDG 202
PKH L PSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 203 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 382
KVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 383 NVPYLVTHDGRTIRYPDPLIKV 448
+P+LVTHD RTIRYPDPLIKV
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKV 156
Score = 41.1 bits (92), Expect = 0.002
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1
Query: 1 HLKRLNAPKAWMLDKLGGVYAP 66
HLKR+ APK WMLDKL GV+AP
Sbjct: 8 HLKRVAAPKHWMLDKLTGVFAP 29
>AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X
isoform protein.
Length = 263
Score = 228 bits (557), Expect = 8e-60
Identities = 105/142 (73%), Positives = 116/142 (81%)
Frame = +2
Query: 23 PKHGCWTNLAVCMHRVPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDG 202
PKH L PSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 203 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 382
KVRTD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K
Sbjct: 75 KVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTK 134
Query: 383 NVPYLVTHDGRTIRYPDPLIKV 448
+P+LVTHD RTIRYPDPLIKV
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKV 156
Score = 41.1 bits (92), Expect = 0.002
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1
Query: 1 HLKRLNAPKAWMLDKLGGVYAP 66
HLKR+ APK WMLDKL GV+AP
Sbjct: 8 HLKRVAAPKHWMLDKLTGVFAP 29
>BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein.
Length = 243
Score = 225 bits (550), Expect = 5e-59
Identities = 101/126 (80%), Positives = 112/126 (88%)
Frame = +2
Query: 71 PSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVV 250
PSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD TYPAGFMDV+
Sbjct: 11 PSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVI 70
Query: 251 SIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYP 430
SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K +P+LVTHD RTIRYP
Sbjct: 71 SIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYP 130
Query: 431 DPLIKV 448
DPLIKV
Sbjct: 131 DPLIKV 136
>M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y
isoform protein.
Length = 263
Score = 222 bits (543), Expect = 4e-58
Identities = 101/142 (71%), Positives = 114/142 (80%)
Frame = +2
Query: 23 PKHGCWTNLAVCMHRVPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDG 202
PKH L PSTGPHKLRECLPL++FLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 203 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 382
KVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 134
Query: 383 NVPYLVTHDGRTIRYPDPLIKV 448
+P+LVTHD RTIRYPDP+IKV
Sbjct: 135 GIPHLVTHDARTIRYPDPVIKV 156
Score = 41.1 bits (92), Expect = 0.002
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1
Query: 1 HLKRLNAPKAWMLDKLGGVYAP 66
HLKR+ APK WMLDKL GV+AP
Sbjct: 8 HLKRVAAPKHWMLDKLTGVFAP 29
>BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein.
Length = 262
Score = 222 bits (543), Expect = 4e-58
Identities = 101/142 (71%), Positives = 114/142 (80%)
Frame = +2
Query: 23 PKHGCWTNLAVCMHRVPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDG 202
PKH L PSTGPHKLRECLPL++FLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 14 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDG 73
Query: 203 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 382
KVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 74 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 133
Query: 383 NVPYLVTHDGRTIRYPDPLIKV 448
+P+LVTHD RTIRYPDP+IKV
Sbjct: 134 GIPHLVTHDARTIRYPDPVIKV 155
Score = 41.1 bits (92), Expect = 0.002
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1
Query: 1 HLKRLNAPKAWMLDKLGGVYAP 66
HLKR+ APK WMLDKL GV+AP
Sbjct: 7 HLKRVAAPKHWMLDKLTGVFAP 28
>BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 222 bits (543), Expect = 4e-58
Identities = 101/142 (71%), Positives = 114/142 (80%)
Frame = +2
Query: 23 PKHGCWTNLAVCMHRVPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDG 202
PKH L PSTGPHKLRECLPL++FLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 203 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 382
KVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 134
Query: 383 NVPYLVTHDGRTIRYPDPLIKV 448
+P+LVTHD RTIRYPDP+IKV
Sbjct: 135 GIPHLVTHDARTIRYPDPVIKV 156
Score = 41.1 bits (92), Expect = 0.002
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1
Query: 1 HLKRLNAPKAWMLDKLGGVYAP 66
HLKR+ APK WMLDKL GV+AP
Sbjct: 8 HLKRVAAPKHWMLDKLTGVFAP 29
>BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 222 bits (543), Expect = 4e-58
Identities = 101/142 (71%), Positives = 114/142 (80%)
Frame = +2
Query: 23 PKHGCWTNLAVCMHRVPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDG 202
PKH L PSTGPHKLRECLPL++FLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 203 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 382
KVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 134
Query: 383 NVPYLVTHDGRTIRYPDPLIKV 448
+P+LVTHD RTIRYPDP+IKV
Sbjct: 135 GIPHLVTHDARTIRYPDPVIKV 156
Score = 41.1 bits (92), Expect = 0.002
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1
Query: 1 HLKRLNAPKAWMLDKLGGVYAP 66
HLKR+ APK WMLDKL GV+AP
Sbjct: 8 HLKRVAAPKHWMLDKLTGVFAP 29
>AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 Y isoform variant protein.
Length = 263
Score = 222 bits (543), Expect = 4e-58
Identities = 101/142 (71%), Positives = 114/142 (80%)
Frame = +2
Query: 23 PKHGCWTNLAVCMHRVPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDG 202
PKH L PSTGPHKLRECLPL++FLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 203 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 382
KVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 134
Query: 383 NVPYLVTHDGRTIRYPDPLIKV 448
+P+LVTHD RTIRYPDP+IKV
Sbjct: 135 GIPHLVTHDARTIRYPDPVIKV 156
Score = 41.1 bits (92), Expect = 0.002
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1
Query: 1 HLKRLNAPKAWMLDKLGGVYAP 66
HLKR+ APK WMLDKL GV+AP
Sbjct: 8 HLKRVAAPKHWMLDKLTGVFAP 29
>AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y
isoform protein.
Length = 263
Score = 222 bits (543), Expect = 4e-58
Identities = 101/142 (71%), Positives = 114/142 (80%)
Frame = +2
Query: 23 PKHGCWTNLAVCMHRVPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDG 202
PKH L PSTGPHKLRECLPL++FLRNRLKYALTG+EV KI QR IK+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQRFIKIDG 74
Query: 203 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 382
KVR D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKITVGVK 134
Query: 383 NVPYLVTHDGRTIRYPDPLIKV 448
+P+LVTHD RTIRYPDP+IKV
Sbjct: 135 GIPHLVTHDARTIRYPDPVIKV 156
Score = 41.1 bits (92), Expect = 0.002
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1
Query: 1 HLKRLNAPKAWMLDKLGGVYAP 66
HLKR+ APK WMLDKL GV+AP
Sbjct: 8 HLKRVAAPKHWMLDKLTGVFAP 29
>M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar protein
mRNA, complete cds. ).
Length = 244
Score = 219 bits (535), Expect = 4e-57
Identities = 98/124 (79%), Positives = 110/124 (88%)
Frame = +2
Query: 77 TGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGFMDVVSI 256
+GPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVRTD TYPAGFMDV+SI
Sbjct: 14 SGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVRTDITYPAGFMDVISI 73
Query: 257 EKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPKNVPYLVTHDGRTIRYPDP 436
+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++ G K +P+LVTHD RTIRYPDP
Sbjct: 74 DKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIFVGTKGIPHLVTHDARTIRYPDP 133
Query: 437 LIKV 448
LIKV
Sbjct: 134 LIKV 137
>AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4
protein.
Length = 263
Score = 214 bits (522), Expect = 1e-55
Identities = 97/142 (68%), Positives = 112/142 (78%)
Frame = +2
Query: 23 PKHGCWTNLAVCMHRVPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDG 202
PKH L PSTGPHKLRECLPL++FLRNRLKYALTG+EV KI Q +K+DG
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEVKKICMQHFLKIDG 74
Query: 203 KVRTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGPK 382
KVR D TYPAGF+DV+SIEKT E FRL+Y+ KG F +HRIT EEAKYKLCKV+++ G K
Sbjct: 75 KVRVDITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAKYKLCKVRKITVGTK 134
Query: 383 NVPYLVTHDGRTIRYPDPLIKV 448
+P+LVTHD RTIRYPDPLIKV
Sbjct: 135 GIPHLVTHDARTIRYPDPLIKV 156
Score = 41.1 bits (92), Expect = 0.002
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1
Query: 1 HLKRLNAPKAWMLDKLGGVYAP 66
HLKR+ APK WMLDKL GV+AP
Sbjct: 8 HLKRVAAPKHWMLDKLTGVFAP 29
>Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4
protein.
Length = 59
Score = 62.1 bits (144), Expect = 8e-10
Identities = 29/42 (69%), Positives = 30/42 (71%)
Frame = +2
Query: 23 PKHGCWTNLAVCMHRVPSTGPHKLRECLPLVIFLRNRLKYAL 148
PKH L PSTGPHKLRECLPL+IFLRNRLKYAL
Sbjct: 15 PKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYAL 56
Score = 41.1 bits (92), Expect = 0.002
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +1
Query: 1 HLKRLNAPKAWMLDKLGGVYAP 66
HLKR+ APK WMLDKL GV+AP
Sbjct: 8 HLKRVAAPKHWMLDKLTGVFAP 29
>AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein.
Length = 182
Score = 32.3 bits (70), Expect = 0.79
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 221 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 367
+YPA + D I + E+FRL+ + + RI + K C ++RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRRICASASAPKTCSIERV 144
>AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens
cDNA FLJ14103 fis, clone MAMMA1001073. ).
Length = 182
Score = 31.1 bits (67), Expect = 1.8
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +2
Query: 221 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRV 367
+YPA + D I + E+FRL+ + + +I + K C ++RV
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRKICASASAPKTCSIERV 144
>AK125035-1|BAC86028.1| 1253|Homo sapiens protein ( Homo sapiens
cDNA FLJ43045 fis, clone BRTHA3003490. ).
Length = 1253
Score = 29.9 bits (64), Expect = 4.2
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +2
Query: 131 RLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGF-MDVVSIEKTNELFRLIYDVKGRF 307
+++Y L E+ KQRLIK D +++T + PA +++ I + + + + D + +
Sbjct: 39 KIEYRLLKEEIANREKQRLIKSD-QLKTSSSSPANSDVEIDGIGRIAMVTKQVTDAESKL 97
Query: 308 TIHRI 322
HRI
Sbjct: 98 KKHRI 102
>AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta chain
VJ region protein.
Length = 76
Score = 29.9 bits (64), Expect = 4.2
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 212 TDPTYPAGFM-DVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATG 376
++ TY +GF+ D I + N F + T+ ++PE++ LC V RV TG
Sbjct: 10 SEATYESGFVIDKFPISRPNLTFSTL-------TVSNMSPEDSSIYLCSVLRVVTG 58
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 29.9 bits (64), Expect = 4.2
Identities = 18/65 (27%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +2
Query: 131 RLKYALTGNEVLKIVKQRLIKVDGKVRTDPTYPAGF-MDVVSIEKTNELFRLIYDVKGRF 307
+++Y L E+ KQRLIK D +++T + PA +++ I + + + + D + +
Sbjct: 784 KIEYRLLKEEIANREKQRLIKSD-QLKTSSSSPANSDVEIDGIGRIAMVTKQVTDAESKL 842
Query: 308 TIHRI 322
HRI
Sbjct: 843 KKHRI 847
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,087,274
Number of Sequences: 237096
Number of extensions: 1536390
Number of successful extensions: 12721
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 12617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12721
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3701294870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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