Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0926
         (450 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical pro...    23   1.3  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    22   3.1  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   4.0  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   5.4  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   5.4  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   7.1  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   7.1  

>AM712905-1|CAN84644.1|  102|Tribolium castaneum hypothetical
           protein protein.
          Length = 102

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = +1

Query: 118 SNYVANNKVNLLSSAAP 168
           SN++  +K N+LSSA P
Sbjct: 76  SNHIQGSKPNILSSAFP 92


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.8 bits (44), Expect = 3.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +1

Query: 184 SVYKASLNQELYFQYVE 234
           ++YK SL ++LYF   E
Sbjct: 267 TMYKLSLTEDLYFAIYE 283


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = +1

Query: 277 LWMKFHNHSTDHPLFSYAVDDNPKEISFWVSNTKE 381
           LW+ F N  +      YA D+N   +  W   T +
Sbjct: 321 LWVGFDNPKSVALKAQYAKDNNLAGVMIWSIETDD 355


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +1

Query: 13  DTAGNLLSPTLH 48
           D AGNL+SP+++
Sbjct: 356 DDAGNLISPSIN 367


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +1

Query: 13  DTAGNLLSPTLH 48
           D AGNL+SP+++
Sbjct: 357 DDAGNLISPSIN 368


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 7/12 (58%), Positives = 11/12 (91%)
 Frame = +1

Query: 13  DTAGNLLSPTLH 48
           D AGNL+SP+++
Sbjct: 357 DGAGNLISPSIN 368


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 14/60 (23%), Positives = 24/60 (40%)
 Frame = +1

Query: 40  TLHTNQQXRSLDSSPSLKILNRRPISSNYVANNKVNLLSSAAPMSDACSVYKASLNQELY 219
           +++ N    S  SSPS+        S NY+         S +  + A + Y  S N  ++
Sbjct: 160 SINNNTSTSSSASSPSVTAAPHLRDSPNYIKPQLHVSTGSTSSPTIASATYTNSANSSIW 219


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.317    0.128    0.380 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,158
Number of Sequences: 336
Number of extensions: 1815
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)