Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0926
(450 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55487| Best HMM Match : Pentaxin (HMM E-Value=0.022) 36 0.012
SB_52216| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.015
SB_21594| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.062
SB_17302| Best HMM Match : Pentaxin (HMM E-Value=1e-09) 33 0.082
SB_52770| Best HMM Match : Pentaxin (HMM E-Value=3.8) 32 0.19
SB_56441| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_8425| Best HMM Match : EGF (HMM E-Value=0) 31 0.44
SB_4946| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.44
SB_45116| Best HMM Match : EGF (HMM E-Value=0) 31 0.58
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 31 0.58
SB_10315| Best HMM Match : Pentaxin (HMM E-Value=5e-12) 30 1.0
SB_11888| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_49882| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.8
SB_44887| Best HMM Match : EGF (HMM E-Value=4.1e-09) 28 3.1
SB_26480| Best HMM Match : EGF (HMM E-Value=0) 28 3.1
SB_50298| Best HMM Match : Pentaxin (HMM E-Value=6.4e-05) 28 4.1
SB_50662| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.1
>SB_55487| Best HMM Match : Pentaxin (HMM E-Value=0.022)
Length = 163
Score = 36.3 bits (80), Expect = 0.012
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 253 DLKEFTMCLWMKFHNHSTDHPLFSYAVDDNPKE 351
DL EFT+C W +++TD+ + SY DN +
Sbjct: 24 DLVEFTICAWYSLASNATDNVILSYVTQDNSSQ 56
>SB_52216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 979
Score = 35.9 bits (79), Expect = 0.015
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 226 YVEYESNLPDLKEFTMCLWMKFHNHSTDH--PLFSYAVDDNPKEISFWVSNTKE 381
YV+Y +PD+ T C+W K ST PLFSYA + +S ++ + +
Sbjct: 332 YVKYHGIIPDITSMTACIWFK-TTASTSFLVPLFSYANSLHDNALSMYLESNND 384
>SB_21594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1075
Score = 33.9 bits (74), Expect = 0.062
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 253 DLKEFTMCLWMKFHNHSTDHPLFSYAVDD 339
DL EFT+C W F +++ D+ + SY D
Sbjct: 892 DLVEFTICAWYSFASNAADNVILSYVTQD 920
Score = 27.1 bits (57), Expect = 7.2
Identities = 10/33 (30%), Positives = 15/33 (45%)
Frame = +1
Query: 253 DLKEFTMCLWMKFHNHSTDHPLFSYAVDDNPKE 351
DL T+C W + D+ + SY DN +
Sbjct: 678 DLSACTICAWYSLWSEWKDNVILSYVTSDNTSQ 710
>SB_17302| Best HMM Match : Pentaxin (HMM E-Value=1e-09)
Length = 550
Score = 33.5 bits (73), Expect = 0.082
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Frame = +1
Query: 181 CSVYKASLN-QELYFQ----YVEYESNLPDLKEFTMCLWMKFHNHS-TDHPLFSYAVDDN 342
CS++K L+ EL F+ Y + + DL FT+C W F+ + +FSY+V
Sbjct: 197 CSLWKDGLDGYELLFRQPFGYSIQDVSNEDLSAFTICFWALFNGDGYSTFAVFSYSVPLQ 256
Query: 343 PKEI 354
PK I
Sbjct: 257 PKSI 260
>SB_52770| Best HMM Match : Pentaxin (HMM E-Value=3.8)
Length = 342
Score = 32.3 bits (70), Expect = 0.19
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +1
Query: 220 FQYVEYESNLPDLKEFTMCLWMKFHNHSTDHPLFSYAVDDNPKEI 354
F V + S +L +F +C W + T++ + SY DN ++
Sbjct: 59 FPVVTFSSPEVELDQFAVCAWYSLYQKWTENVILSYVTSDNRSQL 103
Score = 30.7 bits (66), Expect = 0.58
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +1
Query: 253 DLKEFTMCLWMKFHNHSTDHPLFSYAVDDNPKEI 354
DL E T+C W + D+ + SY DN ++
Sbjct: 203 DLSECTICAWYSLSSEWKDNVILSYVTSDNSSQL 236
>SB_56441| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1717
Score = 31.1 bits (67), Expect = 0.44
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 4/50 (8%)
Frame = +1
Query: 172 SDACSVYKASLNQ-ELY---FQYVEYESNLPDLKEFTMCLWMKFHNHSTD 309
+ C+V+K + +Q EL YV ++ +++E T+CLW+K N + D
Sbjct: 1173 AQVCTVFKENSSQVELLPGSSIYVSFKCYRAEVEEMTLCLWVKISNVTLD 1222
>SB_8425| Best HMM Match : EGF (HMM E-Value=0)
Length = 1955
Score = 31.1 bits (67), Expect = 0.44
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 7/85 (8%)
Frame = +1
Query: 121 NYVANNKVNLLSSAAP--MSDACSVYKASLNQELYFQY-----VEYESNLPDLKEFTMCL 279
N V NKVN A S + K S + +L+F SN+PDL FT+
Sbjct: 633 NGVCKNKVNGYECACNPGYSGSTCATKVSSDFDLHFPLRVVTSSSSTSNIPDLTVFTIAF 692
Query: 280 WMKFHNHSTDHPLFSYAVDDNPKEI 354
WM+ + SYA N + I
Sbjct: 693 WMRTTDRENPGTPISYATTVNGEVI 717
>SB_4946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 31.1 bits (67), Expect = 0.44
Identities = 12/45 (26%), Positives = 22/45 (48%)
Frame = +1
Query: 220 FQYVEYESNLPDLKEFTMCLWMKFHNHSTDHPLFSYAVDDNPKEI 354
F V + S L++F +C W + T++ + SY DN ++
Sbjct: 16 FPVVTFSSPGVVLEQFAVCAWYSLYQKWTENVILSYVTSDNTSQL 60
>SB_45116| Best HMM Match : EGF (HMM E-Value=0)
Length = 2023
Score = 30.7 bits (66), Expect = 0.58
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 256 LKEFTMCLWMKFHNHSTDHPLFSYAVDDNPKEI 354
L EFT+C W + +D + SY DN E+
Sbjct: 1573 LTEFTICSWYSIADKWSDRTIVSYITGDNSSEL 1605
Score = 30.3 bits (65), Expect = 0.77
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +1
Query: 262 EFTMCLWMKFHNHSTDHPLFSYAVDDNPKEISFWV-SNTK 378
EFT+C W ++ +++ + SY DN + V SN K
Sbjct: 1839 EFTICAWYSLGSYGSNNVIMSYVTHDNSSQFQIVVKSNGK 1878
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 30.7 bits (66), Expect = 0.58
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1
Query: 187 VYKASLNQELYFQYVEYESNLPDLKEFTMCLWMKFHNH 300
+ + S E++ +Y+ NLP L F C W+KF+ H
Sbjct: 1381 IEQESFTLEVHNLLKQYKGNLP-LVNFAACYWIKFNKH 1417
>SB_10315| Best HMM Match : Pentaxin (HMM E-Value=5e-12)
Length = 697
Score = 29.9 bits (64), Expect = 1.0
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 172 SDACSVYKASLNQELYFQYVEYESNLP-DLKEFTMCLWMKFHNHSTDHPLFSYAVDDNPK 348
SDA + + ++ +V+ E + +L + T CLW ++ N S SY+ + P
Sbjct: 80 SDAAD-FSLTFDRRSVDDFVKIEEAIAAELSQLTACLWARY-NESRSQTFLSYSTKNTPD 137
Query: 349 EI 354
E+
Sbjct: 138 EL 139
>SB_11888| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 787
Score = 29.9 bits (64), Expect = 1.0
Identities = 28/97 (28%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
Frame = +1
Query: 4 LAADTAGNLLSPTLHTNQQXRSLDSSPSLKILNRRPISSNYVANNKVNL--LSSAAPMSD 177
L G L++PT D + RR I Y++N+ V+L L S+A SD
Sbjct: 32 LIYQNVGKLIAPTYALGTHKLHTDC-----VTERRRILLPYLSNHTVSLYILFSSANQSD 86
Query: 178 ACSVYKASLNQELYFQYVEYESNLPDLKEFTMCLWMK 288
+ +V+ + LP L FT+CLW+K
Sbjct: 87 FMFTVPSGDTD-----FVQLPT-LPSLGRFTVCLWLK 117
>SB_49882| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 594
Score = 29.1 bits (62), Expect = 1.8
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +1
Query: 226 YVEYESNLPDLKEFTMCLWMKFHNHSTDHPLFSYAVDDNPKEI 354
YV++ +N + T+ LW+K + L SYA D P +
Sbjct: 355 YVKFTTNDSKILALTIFLWVKTESTVDQLALMSYATDTEPNSL 397
>SB_44887| Best HMM Match : EGF (HMM E-Value=4.1e-09)
Length = 193
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +1
Query: 184 SVYKASLNQELYFQYVEYESNLPDLKEFTMCLWMKFHNHSTDHPLFSYAVDDNPK 348
S Y ++N Y +PDL F++ LW++ + L SY+V+++ K
Sbjct: 92 SDYDLTINNRASNPYAATIKKIPDLTAFSVSLWVRSDDEQPGTAL-SYSVENSGK 145
>SB_26480| Best HMM Match : EGF (HMM E-Value=0)
Length = 1772
Score = 28.3 bits (60), Expect = 3.1
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +1
Query: 184 SVYKASLNQELYFQYVEYESNLPDLKEFTMCLWMKFHNHSTDHPLFSYAVDDNPK 348
S Y ++N Y +PDL F++ LW++ + L SY+V+++ K
Sbjct: 1190 SDYDLTINNRASNPYAATIKKIPDLTAFSVSLWVRSDDEQPGTAL-SYSVENSGK 1243
>SB_50298| Best HMM Match : Pentaxin (HMM E-Value=6.4e-05)
Length = 330
Score = 27.9 bits (59), Expect = 4.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 244 NLPDLKEFTMCLWMKFHNHSTDHPLFSYAVDDN 342
+LP L FT+CLW+K T + Y V+ +
Sbjct: 22 SLPSLTRFTVCLWLK---ERTSDEILKYEVNSH 51
>SB_50662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 27.9 bits (59), Expect = 4.1
Identities = 15/62 (24%), Positives = 32/62 (51%)
Frame = -1
Query: 345 WVIINSI*EKWMISRMIMELHPQAHRKLLEVWQVALVFYVLEVQLLIQRCLVHAACVRHR 166
W I + + + R+ LH +R+L+ +++ ++ ++QLL + ++ AA R
Sbjct: 45 WDSIEELCQSFQCERLQF-LHYATYRRLVLAFKMKIIQEYGDIQLLPETTILDAAHFRES 103
Query: 165 CG 160
CG
Sbjct: 104 CG 105
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.128 0.380
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,551,046
Number of Sequences: 59808
Number of extensions: 233582
Number of successful extensions: 655
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 591
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 896151577
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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