Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0923
         (650 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6G9A9 Cluster: WD domain, G-beta repeat protein; n=1; ...    36   0.84 
UniRef50_Q8IB56 Cluster: Putative uncharacterized protein MAL8P1...    34   2.6  
UniRef50_A5C0S4 Cluster: Putative uncharacterized protein; n=1; ...    33   7.8  
UniRef50_A0DTZ7 Cluster: Chromosome undetermined scaffold_63, wh...    33   7.8  

>UniRef50_A6G9A9 Cluster: WD domain, G-beta repeat protein; n=1;
           Plesiocystis pacifica SIR-1|Rep: WD domain, G-beta
           repeat protein - Plesiocystis pacifica SIR-1
          Length = 1368

 Score = 35.9 bits (79), Expect = 0.84
 Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
 Frame = -2

Query: 196 MIPANSFKVTVKRLKKFNKK--IRNGFIEEGSSFADVRDWAILFPRQLKKKP-VYNRLTL 26
           ++   S +V  +RL+ F+ +  +RN F  E  S AD+ DW++   RQL   P + ++L +
Sbjct: 265 LVTGLSERVVARRLRSFDPRTRVRNVFAREWPSLADLGDWSVARARQLGLFPTIAHQLKI 324

Query: 25  XLAVL 11
              VL
Sbjct: 325 EQVVL 329


>UniRef50_Q8IB56 Cluster: Putative uncharacterized protein MAL8P1.49;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein MAL8P1.49 - Plasmodium falciparum
            (isolate 3D7)
          Length = 1466

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = +1

Query: 220  FFMMSKKKERMFPVFEESSRIYKQCQKSSGNLVCFFKATKYIYTRN 357
            +++  KKK  +  V  E  +IYK+C+K   N +C++    Y Y RN
Sbjct: 914  YYIQKKKKINIKNVKCEKCKIYKKCKKYQNN-ICYYYYYYYYYYRN 958


>UniRef50_A5C0S4 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 384

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 3/91 (3%)
 Frame = -3

Query: 483 RFSNTQSLNLIKIVTGVLHKKIMTYFPCANKSTFIYLCTL---KNISSIYIFSGFKKTHE 313
           R +   ++ L  ++  ++ K I T+  C +   F Y CT+      S   I  GF     
Sbjct: 249 RQTEVVNMTLSTLLRAIIKKNIKTWEECLSHVEFAYNCTIYSATKFSPFEIVYGFNPLTP 308

Query: 312 IAGRFLTLFVNSTGLFKNRKHSLFLL*HHEK 220
           +  R L LF ++      +K++ F++  HEK
Sbjct: 309 LDLRTLPLFEHAN--LDGKKNTKFIMQIHEK 337


>UniRef50_A0DTZ7 Cluster: Chromosome undetermined scaffold_63, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_63,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 425

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
 Frame = +2

Query: 161 LNSYFKGISRNHITNCKTSRFS*CQR---RKRECFRFLKSPVEFT 286
           L +Y K I  N  T C +  F  C +    K +CFR LK+P  ++
Sbjct: 35  LQTYCKKIHCNSYTTCHSCEFKNCCQFNLEKNQCFRLLKAPFNYS 79


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 551,869,167
Number of Sequences: 1657284
Number of extensions: 10523277
Number of successful extensions: 25870
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25866
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)