Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0923
         (650 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_03_0180 - 16031366-16031445,16031950-16032022,16032148-160321...    29   2.4  
09_02_0013 + 2968779-2969772,2969801-2969919,2970012-2970179           27   9.8  
02_05_1170 + 34663853-34663928,34664038-34664078,34664317-346643...    27   9.8  

>02_03_0180 - 16031366-16031445,16031950-16032022,16032148-16032186,
            16032434-16032715,16032790-16032948,16033034-16033390,
            16033482-16033622,16033919-16034045,16034121-16034263,
            16034740-16034917,16035019-16035552,16035628-16035812,
            16036551-16036637,16036710-16036850,16036896-16037175,
            16037944-16038020,16038326-16039138,16039292-16039801,
            16039926-16040056,16040192-16040246,16040364-16040564,
            16040640-16040909,16041103-16041184,16041271-16041434,
            16041532-16041690,16041762-16042083,16042158-16042544,
            16042811-16042999,16043233-16043317,16043458-16043753,
            16043862-16043965,16044484-16044513,16044602-16044817,
            16044923-16045540,16045718-16045993,16046619-16046762,
            16046854-16046962,16047291-16047475,16047557-16047670,
            16048348-16048479,16048929-16049249,16049424-16049891,
            16054482-16054547,16054691-16054828,16054917-16055015,
            16057098-16057194,16057661-16057761,16057858-16058085,
            16059175-16059381,16059451-16059571,16059921-16059988,
            16060148-16060213,16060396-16060509,16060949-16061300,
            16063571-16063663,16063764-16063922,16064224-16064287,
            16064385-16064577,16064673-16064710,16065510-16065645,
            16065726-16065914,16065994-16066095,16067660-16067777,
            16067861-16067964,16070338-16070346,16071428-16071475,
            16071581-16071676,16072430-16072533,16073964-16074045,
            16076573-16076601,16076708-16076963
          Length = 4246

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 25/96 (26%), Positives = 38/96 (39%), Gaps = 1/96 (1%)
 Frame = -2

Query: 379  LFMY-FKKHF*YIYI*WL*KNTRDCRKIFDTVCKFYWTLQKPEXXXXXXXXXXXXXXXTI 203
            +F+Y F + F   ++     +T +  K  D V  F W +QK E                I
Sbjct: 1496 VFLYRFVQEFTSYFMELATPHTEEAIKFIDKVGGFEWLIQKYEIDGASAIKLDLSLDTPI 1555

Query: 202  CNMIPANSFKVTVKRLKKFNKKIRNGFIEEGSSFAD 95
              ++P NS      +L     K+RNGF   G   +D
Sbjct: 1556 I-IVPKNSQSKDYIQLDLGQLKVRNGFCWRGGEESD 1590


>09_02_0013 + 2968779-2969772,2969801-2969919,2970012-2970179
          Length = 426

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -3

Query: 405 PCANKSTFIYLCTLKNISSIYIFSGFKKTHEIAGRFLT 292
           PC+   T  +LCTLK I     F  F+K   +  + L+
Sbjct: 73  PCSRLLTLQFLCTLKEIEDGISFRFFRKEFTLTWKGLS 110


>02_05_1170 +
           34663853-34663928,34664038-34664078,34664317-34664386,
           34664499-34664647,34664784-34664879,34665406-34665476,
           34665637-34665698,34665778-34665841,34665950-34666034,
           34666129-34666255,34666381-34666454,34666539-34666599,
           34666683-34666771,34666897-34667206,34667763-34667815,
           34668299-34668370,34668648-34668914,34669015-34669047,
           34669163-34669245,34669522-34669594,34669834-34670170,
           34670302-34670633,34670816-34671135,34671261-34671612,
           34671691-34671906
          Length = 1170

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -2

Query: 133 RNGFIEEGSSFADVRDWAILFPRQLKKKPV 44
           R+ FI EG  F  V DW IL   Q+  KP+
Sbjct: 274 RDLFIREGYQFDYVFDWTILKYPQIGSKPL 303


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,704,336
Number of Sequences: 37544
Number of extensions: 247079
Number of successful extensions: 535
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 526
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 534
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)