Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0922
         (750 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC359.03c |||amino acid permease, unknown 8|Schizosaccharomyce...    27   2.9  
SPBC887.09c |||leucine-rich repeat protein Sog2 |Schizosaccharom...    27   3.8  
SPAC26F1.08c |||conserved protein|Schizosaccharomyces pombe|chr ...    26   5.0  
SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr 2||...    26   5.0  
SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr 1|||...    26   5.0  
SPBC557.05 |||arrestin|Schizosaccharomyces pombe|chr 2|||Manual        26   6.6  
SPCP1E11.04c |pal1||membrane associated protein Pal1 |Schizosacc...    26   6.6  
SPBC1773.15 |||membrane transporter|Schizosaccharomyces pombe|ch...    26   6.6  
SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase Snf22...    25   8.7  
SPAC4G8.12c |||alpha-1,2-mannosyltransferase |Schizosaccharomyce...    25   8.7  
SPBC106.04 |ada1||adenosine deaminase Ada1 |Schizosaccharomyces ...    25   8.7  
SPBC428.14 |||1-acylglycerol-3-phosphate acyltransferase |Schizo...    25   8.7  
SPCC1020.05 |||phosphoprotein phosphatase |Schizosaccharomyces p...    25   8.7  

>SPBC359.03c |||amino acid permease, unknown 8|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 579

 Score = 27.1 bits (57), Expect = 2.9
 Identities = 13/38 (34%), Positives = 21/38 (55%)
 Frame = +2

Query: 392 SNY*SYGSRRMSHLAPELNFPVDGNSARPTSFIPSNGI 505
           SN+ ++GS  +SH+   L F   G+S +   F+   GI
Sbjct: 443 SNFFTWGSICLSHIMFRLAFKKQGHSLKELGFVSPMGI 480


>SPBC887.09c |||leucine-rich repeat protein Sog2
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 886

 Score = 26.6 bits (56), Expect = 3.8
 Identities = 11/49 (22%), Positives = 26/49 (53%)
 Frame = +1

Query: 472 PADILYSVKWYKDGKEFFRHVPRDQEPRRKFPLPGVDVEKSSTNGANVT 618
           P+ +L+ ++  K+ ++    +P     +   P P +  E++  NG+N+T
Sbjct: 432 PSSVLHRLEALKEARKLSEQLPNRIFAQDPHPSPRLKKEETHENGSNLT 480


>SPAC26F1.08c |||conserved protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 977

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 18/58 (31%), Positives = 26/58 (44%)
 Frame = -1

Query: 291 MHLFSKLVSLSPPRHTHFTNQSINFSVHQHHGRFPVRAQLQDTAKSSLCNARFLRHST 118
           M + S LV  S   H +   QS+NFSV      FP    +  ++ SS+    F  H +
Sbjct: 187 MRMASDLVGQSGLDHLNKIMQSLNFSVENF---FPSDESVSFSSSSSVIKRMFKEHES 241


>SPBC1348.10c |||phospholipase |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 673

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 470 PSCHLQESSARVPSGTCAGTRSSNSSRLV 384
           P+     +++R PSGT +GT SS +S  V
Sbjct: 624 PTVMSAATTSRAPSGTTSGTASSTTSSSV 652


>SPAC977.09c |||phospholipase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 673

 Score = 26.2 bits (55), Expect = 5.0
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -2

Query: 470 PSCHLQESSARVPSGTCAGTRSSNSSRLV 384
           P+     +++R PSGT +GT SS +S  V
Sbjct: 624 PTVMSAATTSRAPSGTTSGTASSTTSSSV 652


>SPBC557.05 |||arrestin|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 433

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 14/59 (23%), Positives = 25/59 (42%)
 Frame = -1

Query: 261 SPPRHTHFTNQSINFSVHQHHGRFPVRAQLQDTAKSSLCNARFLRHSTAYVILTKHKFH 85
           +P   T   N +++F     H +  +   L  T KS +   + +      + + KHKFH
Sbjct: 38  NPQMETKDVNLTLDFDAPIFHRKAGIDGLLTLTNKSKVNEIQLISIEVFIIGICKHKFH 96


>SPCP1E11.04c |pal1||membrane associated protein Pal1
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 425

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +2

Query: 521 SSDTCHEIKSHEENSLSRESMLKSRARMAR 610
           +S + H   SH ++S S +S LKSR  + R
Sbjct: 112 ASSSRHRSPSHNDSSPSTQSSLKSRGSIRR 141


>SPBC1773.15 |||membrane transporter|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 497

 Score = 25.8 bits (54), Expect = 6.6
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +1

Query: 472 PADILYSVKWYKDGKEFFR 528
           PA +L+  +WY+  ++FFR
Sbjct: 159 PAFVLFIAQWYRKEEQFFR 177


>SPCC1620.14c |snf22|SPCC830.01c|ATP-dependent DNA helicase
           Snf22|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 1680

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
 Frame = -2

Query: 608 APFVLDFSTSTPGRGNFLRGS*SRGTCLK-NSFPSLYHLTE*RMSAGPSCHLQESSARVP 432
           AP+V  +  + P      + S SR   +  N+  S  H+   RMS  PS    ++ + VP
Sbjct: 365 APYV--YRNNLPPSATSFQPSSSRSPSVDPNTVKSAQHIP--RMSPSPSASALKTQSHVP 420

Query: 431 SGTCAGTRSSNSSRL 387
           S     T   N ++L
Sbjct: 421 SAKVPPTSKLNHAQL 435


>SPAC4G8.12c |||alpha-1,2-mannosyltransferase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 533

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 11/20 (55%), Positives = 14/20 (70%), Gaps = 1/20 (5%)
 Frame = -3

Query: 100 KTQIPWNFTTDK-LRSVTNL 44
           K ++PW FTT K +RSV  L
Sbjct: 48  KVELPWEFTTKKPIRSVVPL 67


>SPBC106.04 |ada1||adenosine deaminase Ada1 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 846

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 12/37 (32%), Positives = 17/37 (45%)
 Frame = -1

Query: 519 FLSVFIPFDGIKDVGRAELPSTGKFSSGAKWDMRRDP 409
           FL   I FD + D  + E  +  KF     WD+  +P
Sbjct: 533 FLQRVIGFDSVDDESKPERRTFRKFPYPKHWDINLNP 569


>SPBC428.14 |||1-acylglycerol-3-phosphate acyltransferase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 350

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 8/38 (21%), Positives = 18/38 (47%)
 Frame = -1

Query: 615 HVRAIRARLFNIDSREREFSSWLLISWHVSEEFLSVFI 502
           H+   R  +  I + E +F+ WL   W+  ++ +   +
Sbjct: 267 HIHVRRFPISEIPTEEDQFTDWLYQRWYEKDKLIDTLL 304


>SPCC1020.05 |||phosphoprotein phosphatase |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 509

 Score = 25.4 bits (53), Expect = 8.7
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -1

Query: 600 RARLFNIDSREREFSSWLLISW 535
           RAR+F +D  ER   +W  + W
Sbjct: 472 RARVFELDPVERAVRTWKRLEW 493


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,173,853
Number of Sequences: 5004
Number of extensions: 67401
Number of successful extensions: 209
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 209
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 357280532
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)