Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0921
(750 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g21170.1 68415.m02511 triosephosphate isomerase, chloroplast,... 248 3e-66
At3g55440.1 68416.m06157 triosephosphate isomerase, cytosolic, p... 234 4e-62
At5g55820.1 68418.m06956 expressed protein 31 0.62
At1g63600.1 68414.m07189 protein kinase-related low similarity t... 31 1.1
At1g25220.1 68414.m03130 anthranilate synthase beta subunit (ASB... 30 1.4
At1g31460.1 68414.m03852 expressed protein 30 1.9
At1g63250.1 68414.m07150 DEAD box RNA helicase, putative similar... 29 2.5
At1g61670.1 68414.m06956 expressed protein similar to membrane p... 29 3.3
At1g25540.1 68414.m03171 phytochrome and flowering time regulato... 29 4.4
At1g64900.1 68414.m07357 cytochrome P450, putative similar to cy... 28 5.8
At5g57390.1 68418.m07170 ovule development protein, putative sim... 28 7.6
At5g51380.1 68418.m06370 F-box family protein contains Pfam PF00... 28 7.6
At4g15380.1 68417.m02350 cytochrome P450 family protein similar ... 28 7.6
At2g12190.1 68415.m01316 cytochrome P450, putative 28 7.6
At1g64950.1 68414.m07362 cytochrome P450, putative similar to cy... 28 7.6
At1g64940.1 68414.m07361 cytochrome P450, putative similar to cy... 28 7.6
At1g24807.1 68414.m03108 anthranilate synthase beta subunit, put... 28 7.6
>At2g21170.1 68415.m02511 triosephosphate isomerase, chloroplast,
putative similar to Triosephosphate isomerase,
chloroplast precursor: SP|P48496 from Spinacia oleracea,
SP|P46225 from Secale cereale
Length = 315
Score = 248 bits (607), Expect = 3e-66
Identities = 113/204 (55%), Positives = 146/204 (71%)
Frame = +2
Query: 2 FVVGGNWKMNGDKNQINEIVNNLKKGPLDPNVEVIVGVPAIYLSYVKTIIPDNVEVAAQN 181
F VGGNWK NG K+ I +++++L L+ +V+V+V P +Y+ VK+ + D ++++ QN
Sbjct: 66 FFVGGNWKCNGTKDSIAKLISDLNSATLEADVDVVVSPPFVYIDQVKSSLTDRIDISGQN 125
Query: 182 CWKSPKGAFTGEISPAMIKDVGVNWVILGHSERRTIFGEKDELVAEKVAHALESGLKVIA 361
W GAFTGEIS +KD+G WVILGHSERR + GEKDE + +K A+AL GL VIA
Sbjct: 126 SWVGKGGAFTGEISVEQLKDLGCKWVILGHSERRHVIGEKDEFIGKKAAYALSEGLGVIA 185
Query: 362 CIGETLEERESGKTEEVVFRQLKALVSAIGDKWENIVLAYEPVWAIGTGKTATPQQAQDV 541
CIGE LEERE+GKT +V F QLKA A+ W+NIV+AYEPVWAIGTGK A+PQQAQ+V
Sbjct: 186 CIGEKLEEREAGKTFDVCFAQLKAFADAV-PSWDNIVVAYEPVWAIGTGKVASPQQAQEV 244
Query: 542 HHALRNWLSANVSGSVSDAVRIQY 613
H A+R WL NVS V+ RI Y
Sbjct: 245 HVAVRGWLKKNVSEEVASKTRIIY 268
>At3g55440.1 68416.m06157 triosephosphate isomerase, cytosolic,
putative strong similarity to triosephosphate isomerase,
cytosolic from Petunia hybrida [SP|P48495], from Coptis
japonica [SP|P21820]
Length = 254
Score = 234 bits (573), Expect = 4e-62
Identities = 121/240 (50%), Positives = 152/240 (63%), Gaps = 2/240 (0%)
Frame = +2
Query: 2 FVVGGNWKMNGDKNQINEIVNNLKKG--PLDPNVEVIVGVPAIYLSYVKTIIPDNVEVAA 175
F VGGNWK NG ++ +IVN L + P VEV+V P ++L VK+ + + VAA
Sbjct: 5 FFVGGNWKCNGTAEEVKKIVNTLNEAQVPSQDVVEVVVSPPYVFLPLVKSTLRSDFFVAA 64
Query: 176 QNCWKSPKGAFTGEISPAMIKDVGVNWVILGHSERRTIFGEKDELVAEKVAHALESGLKV 355
QNCW GAFTGE+S M+ ++ + WVILGHSERR I E E V +KVA+AL GLKV
Sbjct: 65 QNCWVKKGGAFTGEVSAEMLVNLDIPWVILGHSERRAILNESSEFVGDKVAYALAQGLKV 124
Query: 356 IACIGETLEERESGKTEEVVFRQLKALVSAIGDKWENIVLAYEPVWAIGTGKTATPQQAQ 535
IAC+GETLEERE+G T +VV Q KA+ + W N+V+AYEPVWAIGTGK A+P QAQ
Sbjct: 125 IACVGETLEEREAGSTMDVVAAQTKAIADRV-TNWSNVVIAYEPVWAIGTGKVASPAQAQ 183
Query: 536 DVHHALRNWLSANVSGSVSDAVRIQYRWLGHSC*C*RALHXAKTLDGS*LVGXQSLTXXF 715
+VH LR WL+ NVS V+ RI Y + C + L +DG LVG SL F
Sbjct: 184 EVHDELRKWLAKNVSADVAATTRIIYGGSVNGGNC-KELGGQADVDGF-LVGGASLKPEF 241
>At5g55820.1 68418.m06956 expressed protein
Length = 1826
Score = 31.5 bits (68), Expect = 0.62
Identities = 23/78 (29%), Positives = 39/78 (50%)
Frame = -3
Query: 415 NNFLSLARFSLFESLTNTGNDFQARFKGMSNLFSNKFIFFTKNCSSFRMTKYNPIYSNVF 236
+ +S AR SL E + ND++A G ++ ++K + + S R T P++ + F
Sbjct: 737 HGIISRARSSLIEE--ESANDYKALSDGSNHKSADKQLEVREGNSLLR-TPDRPVFVDNF 793
Query: 235 DHSG*NFTSKSSFWRLPT 182
D N KSS ++PT
Sbjct: 794 DEVPENSREKSSMEKVPT 811
>At1g63600.1 68414.m07189 protein kinase-related low similarity to
receptor-like protein kinase 5 [Arabidopsis thaliana]
GI:13506747; contains Pfam profile: PF01657 Domain of
unknown function DUF26
Length = 302
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = -3
Query: 670 QCLCXMQSSLALAAVXEPPVLNTYSVRYTPTHIGRQPVTKS-MVDILSLLGSSSLACTNS 494
+C+ S + V E P + YS+ Y P ++ R P T S +D L + +SS + +++
Sbjct: 124 ECMVRYSDSSFFSLVDERPYIIRYSLSYAP-NLDRFPQTLSDKMDELIINATSSPSLSST 182
Query: 493 PY 488
PY
Sbjct: 183 PY 184
>At1g25220.1 68414.m03130 anthranilate synthase beta subunit (ASB1)
identical to anthranilate synthase beta subunit
GI:403434 from [Arabidopsis thaliana]
Length = 276
Score = 30.3 bits (65), Expect = 1.4
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 178 LGCNFDIIRNDSLHIRQVNSRNTNNYL 98
LGC+F++ RND L + ++ +N L
Sbjct: 95 LGCHFEVYRNDELTVEELKKKNPRGVL 121
>At1g31460.1 68414.m03852 expressed protein
Length = 301
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = -1
Query: 456 LSPMADTKAFNCLKTTSSVLPDSLSSRVSPIQAMTFKP 343
LS + A NC T S LPD L SR ++++ P
Sbjct: 25 LSDLEQVAAINCSGFTDSTLPDDLESRFRRLKSLPAAP 62
>At1g63250.1 68414.m07150 DEAD box RNA helicase, putative similar to
RNA helicase (RH25) [Arabidopsis thaliana] GI:3776023;
contains Pfam profiles PF00270: DEAD/DEAH box helicase,
PF00271: Helicase conserved C-terminal domain
Length = 798
Score = 29.5 bits (63), Expect = 2.5
Identities = 27/86 (31%), Positives = 41/86 (47%)
Frame = -3
Query: 562 PVTKSMVDILSLLGSSSLACTNSPYRFIGKHNIFPFVTNGRY*SF*LSKNNFLSLARFSL 383
PV KS D S GS S+ T++ + + + G+ F S+ F S++RF
Sbjct: 125 PVKKS--DQGSRSGSDSIDSTSNSPIDVRRLVSATCDSMGKNRVFGSSRRGFSSMSRFKR 182
Query: 382 FESLTNTGNDFQARFKGMSNLFSNKF 305
ES + G+DF A+ + FS KF
Sbjct: 183 NESSCDEGDDFDAKKLDTLSPFSPKF 208
>At1g61670.1 68414.m06956 expressed protein similar to membrane
protein PTM1 precursor isolog GI:1931644 from
[Arabidopsis thaliana]
Length = 513
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +2
Query: 101 VIVGVPAIYLSYVKTIIP--DNVEVAAQNCWKSPKGAFTGEISPAM 232
V++ +Y Y P D + + WK+P G G+++P M
Sbjct: 175 VVINKTGMYYLYFMICDPELDGTRIKGRTVWKNPDGYLPGKVAPLM 220
>At1g25540.1 68414.m03171 phytochrome and flowering time regulatory
protein (PFT1) PMID: 12815435
Length = 836
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = -2
Query: 488 QVHRQAQYFPICHQWPILKLLIV*KQLPQSCQILSLRESHQYRQ*LSSQIQGHEQPFQQQ 309
Q+H+Q Q Q + + +Q+PQ Q + Q +Q SQ+Q H+Q QQQ
Sbjct: 688 QLHQQQQQQQQIQQQQQQQQHLQQQQMPQLQQQQQQHQQQQQQQHQLSQLQHHQQQQQQQ 747
>At1g64900.1 68414.m07357 cytochrome P450, putative similar to
cytochrome p450 GI:438240 from [Solanum melongena]
Length = 506
Score = 28.3 bits (60), Expect = 5.8
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Frame = +2
Query: 185 WKSPKGAFTGEI-SPAMIKDVGV--NWVILGHSERRTIFGEKDELVAEKVAHALESGLKV 355
W+ + T EI P+ ++ +WV+ ER G ++ +V H L V
Sbjct: 125 WRLLRRNITSEILHPSRVRSYSHARHWVLEILFERFRNHGGEEPIVLIHHLHYAMFALLV 184
Query: 356 IACIGETLEERESGKTEEVVFRQLKAL 436
+ C G+ L+E++ + E + QL +L
Sbjct: 185 LMCFGDKLDEKQIKEVEFIQRLQLLSL 211
>At5g57390.1 68418.m07170 ovule development protein, putative
similar to ovule development protein AINTEGUMENTA
(GI:1209099)[Arabidopsis thaliana]
Length = 555
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/49 (30%), Positives = 21/49 (42%)
Frame = +2
Query: 452 DKWENIVLAYEPVWAIGTGKTATPQQAQDVHHALRNWLSANVSGSVSDA 598
D + N A PV AI T T + + NW++ N+S S A
Sbjct: 492 DGYNNHSAASNPVSAIPLSSTTTMSNGNEGYGGNINWINNNISSSYQTA 540
>At5g51380.1 68418.m06370 F-box family protein contains Pfam
PF00646: F-box domain; similar to F-box protein FBL2
(GI:6063090) [Homo sapiens]
Length = 479
Score = 27.9 bits (59), Expect = 7.6
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = -1
Query: 489 TGS*ASTIFSHLSPMADTKAFNCLKTTSSVLPDSLSSRVSPIQAMTFKPDSR 334
T S ++ H + + +C S + +LSS S ++ +T++PD+R
Sbjct: 405 TTSGLESVILHWEELESMRVVSCKNIKDSEISAALSSLFSLLKELTWRPDTR 456
>At4g15380.1 68417.m02350 cytochrome P450 family protein similar to
CYTOCHROME P450 93A3 (P450 CP5) (SP:O81973) [Glycine
max]
Length = 517
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/26 (46%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Frame = -1
Query: 252 FTPTS-LIIAGEISPVKAPFGDFQQF 178
FTPT + AG S + AP+GD+ +F
Sbjct: 112 FTPTDDSLFAGSFSFISAPYGDYWKF 137
>At2g12190.1 68415.m01316 cytochrome P450, putative
Length = 512
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +2
Query: 293 GEKDELVAEKVAHALESGLKVIACIGETLEERESGKTEEVVFRQL 427
GE+ +V + + +A+ + L V+ C G+ L+E++ + E V RQL
Sbjct: 168 GEEPIVVVDHLHYAMFA-LLVLMCFGDKLDEKQIKQVEYVQRRQL 211
>At1g64950.1 68414.m07362 cytochrome P450, putative similar to
cytochrome P450 89A2 (CYPLXXXIX) (SP:Q42602)
[Arabidopsis thaliana];similar to cytochrome P450
(GI:438242) [Solanum melongena]
Length = 510
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +2
Query: 293 GEKDELVAEKVAHALESGLKVIACIGETLEERESGKTEEVVFRQL 427
GE+ +V + + +A+ + L V+ C G+ L+E++ + E V RQL
Sbjct: 168 GEEPIVVVDHLHYAMFA-LLVLMCFGDKLDEKQIKQVEYVQRRQL 211
>At1g64940.1 68414.m07361 cytochrome P450, putative similar to
cytochrome p450 GI:438242 from [Solanum melongena]
Length = 511
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +2
Query: 293 GEKDELVAEKVAHALESGLKVIACIGETLEERESGKTEEVVFRQL 427
GE+ +V + + +A+ + L V+ C G+ L+E++ + E V RQL
Sbjct: 169 GEEPIVVVDHLHYAMFA-LLVLMCFGDKLDEKQIKQVEYVQRRQL 212
>At1g24807.1 68414.m03108 anthranilate synthase beta subunit,
putative similar to anthranilate synthase beta chain
GI:403434; similar to ESTs dbj|AV540153.1,
dbj|AV557490.1, gb|AI997696.1, gb|AW004516.1,
dbj|AV521371.1
Length = 235
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -3
Query: 220 NFTSKSSFWRLPTVLGCNFDIIRNDSLHIRQVNSRNTNNYL 98
NF + F + L C+F++ RND L + ++ +N L
Sbjct: 40 NFENCYLFLQYMGELQCHFEVYRNDELTVEELKRKNPRGVL 80
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,596,733
Number of Sequences: 28952
Number of extensions: 339932
Number of successful extensions: 932
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1663169840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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