Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0920
(800 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 509 e-146
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 499 e-143
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 391 e-111
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 336 2e-94
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 40 4e-05
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.4
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 3.3
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 4.4
DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2 pr... 22 7.6
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 509 bits (1256), Expect = e-146
Identities = 242/258 (93%), Positives = 245/258 (94%)
Frame = +2
Query: 26 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 205
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 206 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 385
DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 120
Query: 386 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 565
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKK
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKK 180
Query: 566 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEXKADRKSLIEALDAILAPXR 745
IGYNPAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKE K + K LIEALDAIL P R
Sbjct: 181 IGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTR 240
Query: 746 PXDKPLRLSLQDLYKIGG 799
P DK LRL LQD+YKIGG
Sbjct: 241 PTDKALRLPLQDVYKIGG 258
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 499 bits (1230), Expect = e-143
Identities = 235/258 (91%), Positives = 243/258 (94%)
Frame = +2
Query: 26 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 205
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 206 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 385
DKLKAERERGITIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGI 120
Query: 386 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 565
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD T+PPYSE RFEEIKKEVSSYIKK
Sbjct: 121 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKK 180
Query: 566 IGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEXKADRKSLIEALDAILAPXR 745
IGYN A+VAFVPISGWHGDNMLEPS K PW+KGW+VERK+ AD K+LIEALDAIL P R
Sbjct: 181 IGYNTASVAFVPISGWHGDNMLEPSPKTPWYKGWKVERKDGNADGKTLIEALDAILPPSR 240
Query: 746 PXDKPLRLSLQDLYKIGG 799
P DK LRL LQD+YKIGG
Sbjct: 241 PTDKALRLPLQDVYKIGG 258
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 391 bits (962), Expect = e-111
Identities = 186/201 (92%), Positives = 189/201 (94%)
Frame = +2
Query: 197 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 376
WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 377 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY 556
AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSY
Sbjct: 61 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSY 120
Query: 557 IKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEXKADRKSLIEALDAILA 736
IKKIGYNPAAVAFVPISGWHGDNMLE S+KMPWFKGW VERKE K + K LIEALDAIL
Sbjct: 121 IKKIGYNPAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILP 180
Query: 737 PXRPXDKPLRLSLQDLYKIGG 799
P RP DK LRL LQD+YKIGG
Sbjct: 181 PTRPTDKALRLPLQDVYKIGG 201
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 336 bits (825), Expect = 2e-94
Identities = 159/171 (92%), Positives = 161/171 (94%)
Frame = +2
Query: 245 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 424
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 425 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPI 604
REHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKKIGYNPAAVAFVPI
Sbjct: 61 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPI 120
Query: 605 SGWHGDNMLEPSTKMPWFKGWQVERKEXKADRKSLIEALDAILAPXRPXDK 757
SGWHGDNMLE S+KMPWFKGW VERKE K + K LIEALDAIL P RP DK
Sbjct: 121 SGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRPTDK 171
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 39.5 bits (88), Expect = 4e-05
Identities = 42/146 (28%), Positives = 64/146 (43%)
Frame = +2
Query: 284 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 463
VT +D PGH FI G D VL+VAA G E QT + +A V
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV- 246
Query: 464 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPST 643
+IV +NK+D + ++E K + I+++G + V IS G N+ E +
Sbjct: 247 PIIVAINKIDKPNIDIIKVQYELAKHGI--VIEELG---GEIQCVKISALKGINLRELTE 301
Query: 644 KMPWFKGWQVERKEXKADRKSLIEAL 721
+ Q E + K D + L+E +
Sbjct: 302 AII----VQAELMDLKGDLEGLVEGV 323
Score = 25.4 bits (53), Expect = 0.62
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 38 KTHINIVVIGHVDSGKST 91
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 1.4
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 47 INIVVIGHVDSGKST 91
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 3.3
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 269 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 370
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 4.4
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 269 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 370
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2
precursor protein.
Length = 175
Score = 21.8 bits (44), Expect = 7.6
Identities = 7/39 (17%), Positives = 18/39 (46%)
Frame = +2
Query: 605 SGWHGDNMLEPSTKMPWFKGWQVERKEXKADRKSLIEAL 721
S W+ + +L P+ W++ Q K+ + ++ +
Sbjct: 24 SNWNWNTLLRPNFLDGWYQTLQTHMKKVREQMAGILSRI 62
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 222,517
Number of Sequences: 438
Number of extensions: 4797
Number of successful extensions: 18
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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