Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0918
(650 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 31 0.008
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 27 0.18
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 27 0.18
EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D pro... 22 5.0
U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein. 21 6.7
AY819656-1|AAV70656.1| 56|Tribolium castaneum elongation facto... 21 6.7
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 8.8
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 8.8
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 8.8
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 8.8
AJ845188-1|CAH60165.1| 517|Tribolium castaneum putative esteras... 21 8.8
AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein. 21 8.8
AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein. 21 8.8
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 31.1 bits (67), Expect = 0.008
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +2
Query: 524 CVSADLTCDGVDHCADGSDEDT 589
C+ L C+G C+DGSDE+T
Sbjct: 129 CIERGLFCNGEKDCSDGSDENT 150
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 26.6 bits (56), Expect = 0.18
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 524 CVSADLTCDGVDHCADGSDEDT 589
C+ +L C+G C D SDE++
Sbjct: 121 CIDKELFCNGKPDCKDESDENS 142
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 26.6 bits (56), Expect = 0.18
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +2
Query: 524 CVSADLTCDGVDHCADGSDEDT 589
C+ +L C+G C D SDE++
Sbjct: 128 CIDKELFCNGKPDCKDESDENS 149
>EF125547-1|ABL73931.1| 255|Tribolium castaneum obstractor D
protein.
Length = 255
Score = 21.8 bits (44), Expect = 5.0
Identities = 10/32 (31%), Positives = 14/32 (43%)
Frame = +2
Query: 488 GCKEFRCKQREFCVSADLTCDGVDHCADGSDE 583
G +E CK + V + CD C +G E
Sbjct: 23 GNQEDPCKLKSKVVGDETYCDRYWECVNGQQE 54
>U09586-3|AAC47272.1| 470|Tribolium castaneum integrase protein.
Length = 470
Score = 21.4 bits (43), Expect = 6.7
Identities = 6/22 (27%), Positives = 13/22 (59%)
Frame = -3
Query: 507 HLNSLQPCLGSLTAVMTSLKPF 442
HL++++ CL + + T P+
Sbjct: 322 HLSNIEDCLNYVPHISTGFSPY 343
>AY819656-1|AAV70656.1| 56|Tribolium castaneum elongation factor
1-alpha protein.
Length = 56
Score = 21.4 bits (43), Expect = 6.7
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 310 VVHVEMVIAIQLQ*IEMQHEPLEDAV 233
VV I +++ +EM HE L +AV
Sbjct: 29 VVFAPANITTEVKSVEMHHEALPEAV 54
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 8.8
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -3
Query: 600 HRATVSSSEPSAQWSTPSQVRSALTQNSLCLHLNSLQ 490
HR +V+SS P+ V A +++ NSLQ
Sbjct: 1506 HRNSVASSIPAKDVFENGHVNKAFEEDNYDHRRNSLQ 1542
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.0 bits (42), Expect = 8.8
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -3
Query: 600 HRATVSSSEPSAQWSTPSQVRSALTQNSLCLHLNSLQ 490
HR +V+SS P+ V A +++ NSLQ
Sbjct: 1506 HRNSVASSIPAKDVFENGHVNKAFEEDNYDHRRNSLQ 1542
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 21.0 bits (42), Expect = 8.8
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -3
Query: 600 HRATVSSSEPSAQWSTPSQVRSALTQNSLCLHLNSLQ 490
HR +V+SS P+ V A +++ NSLQ
Sbjct: 1506 HRNSVASSIPAKDVFENGHVNKAFEEDNYDHRRNSLQ 1542
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 21.0 bits (42), Expect = 8.8
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = -3
Query: 600 HRATVSSSEPSAQWSTPSQVRSALTQNSLCLHLNSLQ 490
HR +V+SS P+ V A +++ NSLQ
Sbjct: 1506 HRNSVASSIPAKDVFENGHVNKAFEEDNYDHRRNSLQ 1542
>AJ845188-1|CAH60165.1| 517|Tribolium castaneum putative esterase
protein.
Length = 517
Score = 21.0 bits (42), Expect = 8.8
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 242 GCCASGKSRCSPDSSRYL 189
GC +G +R PD+S+ L
Sbjct: 216 GCALNGFARGIPDTSKQL 233
>AJ845187-1|CAH60164.1| 515|Tribolium castaneum esterase protein.
Length = 515
Score = 21.0 bits (42), Expect = 8.8
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 242 GCCASGKSRCSPDSSRYL 189
GC +G +R PD+S+ L
Sbjct: 214 GCALNGFARGIPDTSKQL 231
>AJ844897-1|CAH59956.1| 517|Tribolium castaneum esterase protein.
Length = 517
Score = 21.0 bits (42), Expect = 8.8
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 242 GCCASGKSRCSPDSSRYL 189
GC +G +R PD+S+ L
Sbjct: 216 GCALNGFARGIPDTSKQL 233
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,172
Number of Sequences: 336
Number of extensions: 3178
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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