Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0916
(410 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellu... 175 3e-43
UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellul... 161 5e-39
UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17; Archa... 119 3e-26
UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellu... 114 8e-25
UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1; ... 110 9e-24
UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Ze... 90 2e-17
UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4; ce... 87 1e-16
UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4... 79 3e-14
UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;... 60 2e-08
UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8; Euteleostomi|... 54 9e-07
UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6; Sacchar... 54 9e-07
UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellul... 54 1e-06
UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2; D... 53 2e-06
UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1; ... 51 8e-06
UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n... 48 7e-05
UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12; ... 46 2e-04
UniRef50_A7AXG1 Cluster: Rps12; n=1; Babesia bovis|Rep: Rps12 - ... 46 3e-04
UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=... 46 4e-04
UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondria... 45 5e-04
UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellul... 45 7e-04
UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondr... 44 0.001
UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S riboso... 44 0.001
UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12; n=... 44 0.001
UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella ve... 44 0.001
UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit... 43 0.002
UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2; Bilateria|... 43 0.003
UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondria... 43 0.003
UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondria... 42 0.004
UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondria... 42 0.005
UniRef50_P46759 Cluster: Mitochondrial ribosomal protein S12; n=... 42 0.006
UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=... 41 0.009
UniRef50_Q0QIR5 Cluster: Ribosomal protein S12; n=1; Oltmannsiel... 41 0.011
UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1; T... 40 0.026
UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2; ... 38 0.11
UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN full... 36 0.24
UniRef50_A7R6Q2 Cluster: Chromosome undetermined scaffold_1375, ... 36 0.24
UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1; B... 36 0.32
UniRef50_Q6R9M1 Cluster: Putative uncharacterized protein orf127... 34 0.98
UniRef50_UPI000049A59F Cluster: ankyrin repeat protein; n=1; Ent... 34 1.3
UniRef50_A4H5P4 Cluster: Putative uncharacterized protein; n=1; ... 32 5.2
UniRef50_Q2G7F6 Cluster: Putative uncharacterized protein precur... 31 6.9
UniRef50_Q6VEC9 Cluster: Ribosomal protein S12; n=1; Emiliania h... 31 6.9
UniRef50_UPI00006A21E9 Cluster: gamma-glutamyltransferase 6 homo... 31 9.1
UniRef50_Q9F3Q3 Cluster: Putative uncharacterized protein SCO763... 31 9.1
UniRef50_A7HJP3 Cluster: FeoA family protein; n=1; Fervidobacter... 31 9.1
>UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellular
organisms|Rep: 40S ribosomal protein S23 - Homo sapiens
(Human)
Length = 143
Score = 175 bits (426), Expect = 3e-43
Identities = 84/92 (91%), Positives = 86/92 (93%)
Frame = -2
Query: 403 LXKVGVQXKQPNSAIRKCVRVQLIKNGKKVXAFVPRDGCLNHIEENDEVLVAGFGRKGHA 224
L KVGV+ KQPNSAIRKCVRVQLIKNGKK+ AFVP DGCLN IEENDEVLVAGFGRKGHA
Sbjct: 52 LEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNFIEENDEVLVAGFGRKGHA 111
Query: 223 VGDIPGVRFKVVKVANVSLLALYKEKKERPRS 128
VGDIPGVRFKVVKVANVSLLALYK KKERPRS
Sbjct: 112 VGDIPGVRFKVVKVANVSLLALYKGKKERPRS 143
>UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellular
organisms|Rep: 40S ribosomal protein S23 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 145
Score = 161 bits (391), Expect = 5e-39
Identities = 75/92 (81%), Positives = 84/92 (91%)
Frame = -2
Query: 403 LXKVGVQXKQPNSAIRKCVRVQLIKNGKKVXAFVPRDGCLNHIEENDEVLVAGFGRKGHA 224
L K+G++ KQPNSAIRKCVRVQLIKNGKKV AFVP DGCLN ++ENDEVL+AGFGRKG A
Sbjct: 54 LEKLGIESKQPNSAIRKCVRVQLIKNGKKVTAFVPNDGCLNFVDENDEVLLAGFGRKGKA 113
Query: 223 VGDIPGVRFKVVKVANVSLLALYKEKKERPRS 128
GDIPGVRFKVVKV+ VSLLAL+KEKKE+PRS
Sbjct: 114 KGDIPGVRFKVVKVSGVSLLALWKEKKEKPRS 145
>UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17;
Archaea|Rep: 30S ribosomal protein S12P - Pyrobaculum
aerophilum
Length = 147
Score = 119 bits (286), Expect = 3e-26
Identities = 55/91 (60%), Positives = 74/91 (81%), Gaps = 1/91 (1%)
Frame = -2
Query: 403 LXKVGVQXKQPNSAIRKCVRVQLIKNGKKVXAFVPRDGCLNHIEENDEVLVAGF-GRKGH 227
L KVGV+ ++PN+A+RKCVRVQL+KNGK V AFVP DG LN+I E+DEV++ G +G
Sbjct: 55 LEKVGVEARKPNAAVRKCVRVQLVKNGKVVTAFVPLDGSLNYINEHDEVVIERIGGPEGR 114
Query: 226 AVGDIPGVRFKVVKVANVSLLALYKEKKERP 134
++GDIPGVRFKV+KV VSL A+++ KK++P
Sbjct: 115 SLGDIPGVRFKVIKVNGVSLWAIWRGKKQKP 145
>UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellular
organisms|Rep: 30S ribosomal protein S12P - Uncultured
methanogenic archaeon RC-I
Length = 142
Score = 114 bits (274), Expect = 8e-25
Identities = 53/91 (58%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Frame = -2
Query: 403 LXKVGVQXKQPNSAIRKCVRVQLIKNGKKVXAFVPRDGCLNHIEENDEVLVAGF-GRKGH 227
L KVGV+ KQPNSAIRKC+R+QLIKNG+++ AF P DG +N I+E+DEV + G GR G
Sbjct: 50 LEKVGVEAKQPNSAIRKCIRIQLIKNGRQITAFCPGDGAINFIDEHDEVTIEGIGGRMGG 109
Query: 226 AVGDIPGVRFKVVKVANVSLLALYKEKKERP 134
+ GDIPGVRF+V KV +VSL + K+++P
Sbjct: 110 SYGDIPGVRFRVFKVNDVSLEEMVAGKRDKP 140
>UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 102
Score = 110 bits (265), Expect = 9e-24
Identities = 54/95 (56%), Positives = 63/95 (66%)
Frame = +3
Query: 120 YTYDLGRSFFSL*RARRDTLATFTTLKRTPGMSPTA*PLRPNPATSTSSFSSMWFRQPSR 299
Y YDLG SFFS +A ++T T TTL TPG+SP A PL P PA TSSFSS F+QPS
Sbjct: 3 YIYDLGFSFFSFHKANKETPETLTTLNLTPGISPLALPLLPKPANKTSSFSSTKFKQPSF 62
Query: 300 GTNAXTFFPFLMSCTRTHLRMAELGCLXCTPTXSR 404
GT A TF PFL++ T TH +AE GCL P S+
Sbjct: 63 GTKAVTFLPFLINWTSTHFSIAEFGCLDSIPIFSK 97
>UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Zea
mays|Rep: Putative 40S ribosomal protein - Zea mays
(Maize)
Length = 309
Score = 89.8 bits (213), Expect = 2e-17
Identities = 41/46 (89%), Positives = 45/46 (97%)
Frame = -2
Query: 265 DEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 128
DEVL+AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL+KEKKE+PRS
Sbjct: 224 DEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 269
>UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4;
cellular organisms|Rep: Protein splicing (Intein) site -
Caldivirga maquilingensis IC-167
Length = 661
Score = 87.4 bits (207), Expect = 1e-16
Identities = 45/74 (60%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Frame = -2
Query: 352 CVRVQLIKNGKKVXAFVPRDGCLNHIEENDEVLVAGF-GRKGHAVGDIPGVRFKVVKVAN 176
CVRVQL KNGK V AFVP DG LN I E+DEV++ G +G A GD+PGVRFKV KV
Sbjct: 586 CVRVQLTKNGKVVTAFVPWDGGLNLINEHDEVIIERIGGPEGRAYGDLPGVRFKVTKVNG 645
Query: 175 VSLLALYKEKKERP 134
VSL A+ KK++P
Sbjct: 646 VSLKAILLGKKQKP 659
Score = 32.7 bits (71), Expect = 3.0
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = -2
Query: 403 LXKVGVQXKQPNSAIRKCVRVQLIKN 326
L KVGV+ ++PN+A+RKCV + N
Sbjct: 55 LEKVGVEARKPNAAVRKCVTPDTLIN 80
>UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4;
Oryza sativa|Rep: Putative 40s ribosomal protein S23 -
Oryza sativa (Rice)
Length = 301
Score = 79.0 bits (186), Expect = 3e-14
Identities = 34/49 (69%), Positives = 40/49 (81%)
Frame = -2
Query: 403 LXKVGVQXKQPNSAIRKCVRVQLIKNGKKVXAFVPRDGCLNHIEENDEV 257
L K+G++ KQPNSAI KC RVQL+KNGKK+ AFVP DGCLN I+EN V
Sbjct: 122 LEKIGIEAKQPNSAICKCARVQLVKNGKKIAAFVPNDGCLNFIKENGPV 170
>UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 143
Score = 60.1 bits (139), Expect = 2e-08
Identities = 31/83 (37%), Positives = 49/83 (59%)
Frame = +2
Query: 155 VESEERHVGYFYHLKTNSGNVTDGVTFTTESRH*YXXXXXXXXXATVTGDECGHFLSVLN 334
++S++R++GYF HLK +S ++T +TF+T+S + + A + G E L VLN
Sbjct: 9 LQSQQRNIGYFNHLKEDSRDITYSMTFSTKSSN-WIIIFLNEVQAAIIGHERCDLLPVLN 67
Query: 335 ELYTDAFADGRVGLLXLYTNFXE 403
EL+ DA DGR+ L L F +
Sbjct: 68 ELHPDALPDGRIWLFGLNPYFFQ 90
>UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8;
Euteleostomi|Rep: Mrps12-prov protein - Xenopus laevis
(African clawed frog)
Length = 150
Score = 54.4 bits (125), Expect = 9e-07
Identities = 31/65 (47%), Positives = 46/65 (70%)
Frame = -2
Query: 379 KQPNSAIRKCVRVQLIKNGKKVXAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 200
K+PNSA RKC RV+L NGK+V F+P +G ++++E++ VLV G GR D+PGV+
Sbjct: 82 KKPNSANRKCARVRL-SNGKEVICFIPGEG--HNLQEHNIVLVEG-GR----TQDLPGVK 133
Query: 199 FKVVK 185
K+V+
Sbjct: 134 LKIVR 138
>UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6;
Saccharomycetales|Rep: 30S ribosomal protein S12 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 183
Score = 54.4 bits (125), Expect = 9e-07
Identities = 31/70 (44%), Positives = 49/70 (70%)
Frame = -2
Query: 388 VQXKQPNSAIRKCVRVQLIKNGKKVXAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIP 209
++ K+PNSA+RKC RV+L NGK + A +P +G ++++E+ VLV G GR V D+P
Sbjct: 99 LKPKKPNSALRKCARVRL-SNGKVISALIPGEG--HNLQEHHVVLVRG-GR----VQDVP 150
Query: 208 GVRFKVVKVA 179
GV++ +V+ A
Sbjct: 151 GVKYHLVRGA 160
>UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellular
organisms|Rep: 30S ribosomal protein S12 - Aquifex
aeolicus
Length = 128
Score = 54.0 bits (124), Expect = 1e-06
Identities = 32/70 (45%), Positives = 49/70 (70%)
Frame = -2
Query: 388 VQXKQPNSAIRKCVRVQLIKNGKKVXAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIP 209
V K+PNSA+RK RV+L NG +V A++P +G ++++E+ VLV G GR V D+P
Sbjct: 40 VTPKKPNSALRKVARVRL-SNGIEVTAYIPGEG--HNLQEHSIVLVRG-GR----VKDLP 91
Query: 208 GVRFKVVKVA 179
GVR+K+++ A
Sbjct: 92 GVRYKIIRGA 101
>UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2;
Dikarya|Rep: Ribosomal protein S12, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 176
Score = 53.2 bits (122), Expect = 2e-06
Identities = 28/65 (43%), Positives = 45/65 (69%)
Frame = -2
Query: 379 KQPNSAIRKCVRVQLIKNGKKVXAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 200
++PNSA+RK RV+L NG+ A++P +G ++++E+ VLV G G K D+PGVR
Sbjct: 94 RKPNSAVRKVARVKL-SNGQMTTAYIPGEG--HNLQEHSVVLVRGGGAK-----DLPGVR 145
Query: 199 FKVVK 185
+K+V+
Sbjct: 146 YKIVR 150
>UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 128
Score = 51.2 bits (117), Expect = 8e-06
Identities = 22/27 (81%), Positives = 25/27 (92%)
Frame = -2
Query: 265 DEVLVAGFGRKGHAVGDIPGVRFKVVK 185
DEVL++GFG KGHAVGDI GVRF+VVK
Sbjct: 67 DEVLISGFGHKGHAVGDIRGVRFEVVK 93
>UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n=3;
Eukaryota|Rep: Apicoplast 30S ribosomal protein S12 -
Toxoplasma gondii
Length = 121
Score = 48.0 bits (109), Expect = 7e-05
Identities = 24/65 (36%), Positives = 48/65 (73%)
Frame = -2
Query: 379 KQPNSAIRKCVRVQLIKNGKKVXAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 200
K+PNSA+RK +++L KN K++ A++P +G + +++++ VL+ +KG V D+PG++
Sbjct: 41 KKPNSALRKIAKIKL-KNKKEILAYIPGEG--HALQDHNFVLI----KKGR-VQDLPGIK 92
Query: 199 FKVVK 185
+KV++
Sbjct: 93 YKVIR 97
>UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12;
n=5; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S12 - Chlamydomonas reinhardtii
Length = 133
Score = 46.4 bits (105), Expect = 2e-04
Identities = 30/68 (44%), Positives = 45/68 (66%)
Frame = -2
Query: 388 VQXKQPNSAIRKCVRVQLIKNGKKVXAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIP 209
V K+PNSA+RK RV+L G +V A++P G ++++E+ VLV G GR V D+P
Sbjct: 40 VTPKKPNSALRKVARVRL-TTGFEVTAYIP--GVGHNLQEHAVVLVRG-GR----VKDLP 91
Query: 208 GVRFKVVK 185
GVR+ +V+
Sbjct: 92 GVRYHIVR 99
>UniRef50_A7AXG1 Cluster: Rps12; n=1; Babesia bovis|Rep: Rps12 -
Babesia bovis
Length = 123
Score = 46.0 bits (104), Expect = 3e-04
Identities = 27/64 (42%), Positives = 40/64 (62%)
Frame = -2
Query: 379 KQPNSAIRKCVRVQLIKNGKKVXAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 200
K+PNSA+RK ++ L N K V A+VP + + I +N VL+ KG V D+PGV+
Sbjct: 43 KKPNSAVRKVIKTTL--NKKTVLAYVPGENVI--IPKNSRVLI-----KGGNVPDLPGVK 93
Query: 199 FKVV 188
+KV+
Sbjct: 94 YKVI 97
>UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=3;
Coelomata|Rep: Mitochondrial ribosomal protein S12 -
Bombyx mori (Silk moth)
Length = 111
Score = 45.6 bits (103), Expect = 4e-04
Identities = 29/65 (44%), Positives = 44/65 (67%)
Frame = -2
Query: 379 KQPNSAIRKCVRVQLIKNGKKVXAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 200
K+PNSA RKCV V+L NGK++ A++P G ++++E++ VLV GR + D PGV+
Sbjct: 42 KKPNSANRKCVLVRL-SNGKEMVAYIP--GIGHNLQEHNVVLVR-VGR----LKDCPGVK 93
Query: 199 FKVVK 185
K V+
Sbjct: 94 LKCVR 98
>UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondrial
precursor; n=13; Deuterostomia|Rep: 28S ribosomal
protein S12, mitochondrial precursor - Homo sapiens
(Human)
Length = 138
Score = 45.2 bits (102), Expect = 5e-04
Identities = 28/65 (43%), Positives = 41/65 (63%)
Frame = -2
Query: 379 KQPNSAIRKCVRVQLIKNGKKVXAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 200
K+PNSA RKC RV+L G++ F+P +G + ++E+ VLV G GR D+PGV+
Sbjct: 71 KKPNSANRKCCRVRL-STGREAVCFIPGEG--HTLQEHQIVLVEG-GR----TQDLPGVK 122
Query: 199 FKVVK 185
VV+
Sbjct: 123 LTVVR 127
>UniRef50_Q92J95 Cluster: 30S ribosomal protein S12; n=15; cellular
organisms|Rep: 30S ribosomal protein S12 - Rickettsia
conorii
Length = 129
Score = 44.8 bits (101), Expect = 7e-04
Identities = 27/67 (40%), Positives = 42/67 (62%)
Frame = -2
Query: 388 VQXKQPNSAIRKCVRVQLIKNGKKVXAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIP 209
V K+PNSA+RK V+L N + V A++P G + ++E+D VLV +G V D+P
Sbjct: 40 VTPKKPNSALRKIATVRL-SNKRTVNAYIP--GEKHSVKEHDRVLV-----RGGQVPDLP 91
Query: 208 GVRFKVV 188
GV++ +V
Sbjct: 92 GVKYHIV 98
>UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S12; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to mitochondrial ribosomal protein
S12 - Nasonia vitripennis
Length = 173
Score = 44.4 bits (100), Expect = 0.001
Identities = 28/65 (43%), Positives = 43/65 (66%)
Frame = -2
Query: 379 KQPNSAIRKCVRVQLIKNGKKVXAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 200
K+PNSA RKCV V+L NGK++ A++P G ++++E++ VL R G D+PGV+
Sbjct: 104 KKPNSANRKCVLVRL-SNGKEMTAYIP--GIGHNLQEHNIVLC----RVGRC-RDVPGVK 155
Query: 199 FKVVK 185
K V+
Sbjct: 156 IKCVR 160
>UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S ribosomal
protein S12, mitochondrial precursor (MT-RPS12)
(Technical knockout locus protein); n=2; Coelomata|Rep:
PREDICTED: similar to 40S ribosomal protein S12,
mitochondrial precursor (MT-RPS12) (Technical knockout
locus protein) - Tribolium castaneum
Length = 156
Score = 44.4 bits (100), Expect = 0.001
Identities = 27/65 (41%), Positives = 44/65 (67%)
Frame = -2
Query: 379 KQPNSAIRKCVRVQLIKNGKKVXAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 200
K+PNSA RKCV V+L NGK++ A++P G ++++E++ +++ GR V D PGV+
Sbjct: 89 KKPNSANRKCVLVRL-SNGKEMVAYIP--GIGHNLQEHN-IVLCRVGR----VQDCPGVK 140
Query: 199 FKVVK 185
K V+
Sbjct: 141 IKCVR 145
>UniRef50_P92532 Cluster: Mitochondrial ribosomal protein S12;
n=1255; cellular organisms|Rep: Mitochondrial ribosomal
protein S12 - Arabidopsis thaliana (Mouse-ear cress)
Length = 125
Score = 44.4 bits (100), Expect = 0.001
Identities = 25/65 (38%), Positives = 43/65 (66%)
Frame = -2
Query: 379 KQPNSAIRKCVRVQLIKNGKKVXAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 200
K+PNSA+RK +V+L N + A++P +G ++++E+ VL+ G GR V D+PGV+
Sbjct: 43 KKPNSALRKIAKVRL-SNRHDIFAYIPGEG--HNLQEHSTVLIRG-GR----VKDLPGVK 94
Query: 199 FKVVK 185
F ++
Sbjct: 95 FHCIR 99
>UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 110
Score = 44.0 bits (99), Expect = 0.001
Identities = 25/65 (38%), Positives = 41/65 (63%)
Frame = -2
Query: 379 KQPNSAIRKCVRVQLIKNGKKVXAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 200
K+PNSA RKC ++L NGK + A++P G ++E+ V+ G GR V D PG++
Sbjct: 48 KKPNSAQRKCALLKL-SNGKTISAYIP--GERGQLQEHGVVIFEG-GR----VQDCPGIK 99
Query: 199 FKVVK 185
+K+++
Sbjct: 100 YKIIR 104
>UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit
S12; n=2; Ascomycota|Rep: Mitochondrial ribosomal
protein subunit S12 - Schizosaccharomyces pombe (Fission
yeast)
Length = 146
Score = 43.2 bits (97), Expect = 0.002
Identities = 28/68 (41%), Positives = 43/68 (63%)
Frame = -2
Query: 388 VQXKQPNSAIRKCVRVQLIKNGKKVXAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIP 209
V+ K+PNSA+RK RV+L G+ V A++P G ++ +E+ VL+ G GR D P
Sbjct: 61 VKPKKPNSAVRKVARVRL-STGRSVTAYIP--GIGHNAQEHAVVLLRG-GR----AQDCP 112
Query: 208 GVRFKVVK 185
GV++ VV+
Sbjct: 113 GVQYHVVR 120
>UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2;
Bilateria|Rep: EG:BACH59J11.1 protein - Drosophila
melanogaster (Fruit fly)
Length = 154
Score = 42.7 bits (96), Expect = 0.003
Identities = 25/65 (38%), Positives = 44/65 (67%)
Frame = -2
Query: 379 KQPNSAIRKCVRVQLIKNGKKVXAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 200
K+PNSA RKCV V+L GK++ A++P G ++++E++ +++ GR + D+PGV+
Sbjct: 85 KKPNSANRKCVLVRL-STGKEMVAYIP--GIGHNLQEHN-IVLCRVGR----LQDVPGVK 136
Query: 199 FKVVK 185
K V+
Sbjct: 137 LKAVR 141
>UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=7; Coelomata|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 140
Score = 42.7 bits (96), Expect = 0.003
Identities = 25/65 (38%), Positives = 44/65 (67%)
Frame = -2
Query: 379 KQPNSAIRKCVRVQLIKNGKKVXAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 200
K+PNSA RKCV V+L GK++ A++P G ++++E++ +++ GR + D+PGV+
Sbjct: 71 KKPNSANRKCVLVRL-STGKEMVAYIP--GIGHNLQEHN-IVLCRVGR----LQDVPGVK 122
Query: 199 FKVVK 185
K V+
Sbjct: 123 LKAVR 127
>UniRef50_Q01607 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=2; Eukaryota|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Oenothera hookeri
(Hooker's evening primrose)
Length = 188
Score = 42.3 bits (95), Expect = 0.004
Identities = 26/65 (40%), Positives = 42/65 (64%)
Frame = -2
Query: 379 KQPNSAIRKCVRVQLIKNGKKVXAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 200
K+PNSA+ K +V+L N V A++P +G ++++E+ VLV G GR V D+PGV+
Sbjct: 106 KKPNSALGKIAKVRL-SNRNDVFAYIPGEG--HNLQEHSMVLVRG-GR----VKDLPGVK 157
Query: 199 FKVVK 185
F ++
Sbjct: 158 FHCIR 162
>UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondrial
precursor; n=18; Dikarya|Rep: 37S ribosomal protein S12,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 153
Score = 41.9 bits (94), Expect = 0.005
Identities = 28/70 (40%), Positives = 43/70 (61%)
Frame = -2
Query: 388 VQXKQPNSAIRKCVRVQLIKNGKKVXAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIP 209
++ K+PNSA RK RV+L NG V A++P +G + +E+ V V G GR D+P
Sbjct: 68 LKPKKPNSAQRKACRVRL-TNGNVVSAYIPGEG--HDAQEHSIVYVRG-GR----CQDLP 119
Query: 208 GVRFKVVKVA 179
GV++ V++ A
Sbjct: 120 GVKYHVIRGA 129
>UniRef50_P46759 Cluster: Mitochondrial ribosomal protein S12; n=3;
Eukaryota|Rep: Mitochondrial ribosomal protein S12 -
Acanthamoeba castellanii (Amoeba)
Length = 127
Score = 41.5 bits (93), Expect = 0.006
Identities = 25/68 (36%), Positives = 43/68 (63%)
Frame = -2
Query: 388 VQXKQPNSAIRKCVRVQLIKNGKKVXAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIP 209
V+ K+PNSA RK +++L + + A++P G ++++E VLV+G GR D+P
Sbjct: 40 VKPKKPNSAQRKVAKLRL-STRRMIIAYIPGQG--HNLQEYSSVLVSG-GR----APDLP 91
Query: 208 GVRFKVVK 185
GVR+ ++K
Sbjct: 92 GVRYTLIK 99
>UniRef50_P48858 Cluster: Mitochondrial ribosomal protein S12; n=3;
Eukaryota|Rep: Mitochondrial ribosomal protein S12 -
Chondrus crispus (Carragheen)
Length = 127
Score = 41.1 bits (92), Expect = 0.009
Identities = 31/83 (37%), Positives = 47/83 (56%)
Frame = -2
Query: 379 KQPNSAIRKCVRVQLIKNGKKVXAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 200
K+PNSA RK +V L NGK + ++ +G + ++E+ VLV G GR V D+PGV+
Sbjct: 43 KKPNSAERKVAKVNL-TNGKSIIGYISGEG--HTLQEHSLVLVRG-GR----VKDLPGVQ 94
Query: 199 FKVVKVANVSLLALYKEKKERPR 131
+ V+ L A+ KK R +
Sbjct: 95 YHFVR-GVYDLHAVGTRKKSRSK 116
>UniRef50_Q0QIR5 Cluster: Ribosomal protein S12; n=1;
Oltmannsiellopsis viridis|Rep: Ribosomal protein S12 -
Oltmannsiellopsis viridis (Marine flagellate)
Length = 127
Score = 40.7 bits (91), Expect = 0.011
Identities = 29/83 (34%), Positives = 48/83 (57%)
Frame = -2
Query: 379 KQPNSAIRKCVRVQLIKNGKKVXAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 200
K+PNSA+RK +V+L N V +P +G ++++E+ +L G GR V D+PGV+
Sbjct: 46 KKPNSALRKVAKVRL-SNKTTVIVAIPGEG--HNLKEHAIILFRG-GR----VRDLPGVK 97
Query: 199 FKVVKVANVSLLALYKEKKERPR 131
+K V+ + L + K K R +
Sbjct: 98 YKAVR-GVLDLAGVQKRKTARSK 119
>UniRef50_Q4MYA6 Cluster: Ribosomal protein S12, putative; n=1;
Theileria parva|Rep: Ribosomal protein S12, putative -
Theileria parva
Length = 124
Score = 39.5 bits (88), Expect = 0.026
Identities = 24/69 (34%), Positives = 39/69 (56%)
Frame = -2
Query: 394 VGVQXKQPNSAIRKCVRVQLIKNGKKVXAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGD 215
+ + K+PNSA RK ++L KN KK+ A++P G + + + VL+ G + D
Sbjct: 35 ISMSPKKPNSAKRKVGIIEL-KNNKKIKAYIP--GERSVVRDKTRVLIRGGNTR-----D 86
Query: 214 IPGVRFKVV 188
+PGV K+V
Sbjct: 87 LPGVNHKIV 95
>UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 157
Score = 37.5 bits (83), Expect = 0.11
Identities = 21/49 (42%), Positives = 33/49 (67%)
Frame = -2
Query: 379 KQPNSAIRKCVRVQLIKNGKKVXAFVPRDGCLNHIEENDEVLVAGFGRK 233
K+PNS RKC V+L G +V A++P G ++++E+ +VLV G GR+
Sbjct: 89 KKPNSGNRKCAIVRL-STGAEVCAYIPNVG--HNLQEHSQVLVKG-GRR 133
>UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence; n=8;
Euarchontoglires|Rep: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 154
Score = 36.3 bits (80), Expect = 0.24
Identities = 21/59 (35%), Positives = 29/59 (49%)
Frame = +2
Query: 227 VTFTTESRH*YXXXXXXXXXATVTGDECGHFLSVLNELYTDAFADGRVGLLXLYTNFXE 403
+TF+T+S + A + G E L VLNEL+ DA DGR+ L L F +
Sbjct: 1 MTFSTKSSNQNFIIFLNEVQAAIIGHERCDLLPVLNELHPDALPDGRIWLFGLNPYFFQ 59
>UniRef50_A7R6Q2 Cluster: Chromosome undetermined scaffold_1375,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1375, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 915
Score = 36.3 bits (80), Expect = 0.24
Identities = 25/65 (38%), Positives = 41/65 (63%)
Frame = -2
Query: 379 KQPNSAIRKCVRVQLIKNGKKVXAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 200
K+ NSA+RK RV+L +G ++ ++P G ++ +E+ VLV G GR V D+P VR
Sbjct: 176 KKSNSALRKVARVRL-TSGFEITTYIP--GIGHNSQEHFVVLVRG-GR----VKDLPNVR 227
Query: 199 FKVVK 185
+ +V+
Sbjct: 228 YHIVR 232
>UniRef50_A7AR95 Cluster: Ribosomal protein S12, putative; n=1;
Babesia bovis|Rep: Ribosomal protein S12, putative -
Babesia bovis
Length = 294
Score = 35.9 bits (79), Expect = 0.32
Identities = 25/68 (36%), Positives = 38/68 (55%)
Frame = -2
Query: 388 VQXKQPNSAIRKCVRVQLIKNGKKVXAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIP 209
V ++PNS +RK RV+L G+ V VP +G +++ + VLV G GR D+
Sbjct: 141 VTPRKPNSGLRKVARVRL-STGRTVTCHVPGEG--HNLHTHSVVLVRG-GR----CQDVS 192
Query: 208 GVRFKVVK 185
G +KVV+
Sbjct: 193 GCHYKVVR 200
>UniRef50_Q6R9M1 Cluster: Putative uncharacterized protein orf127;
n=3; Zea mays|Rep: Putative uncharacterized protein
orf127 - Zea mays (Maize)
Length = 127
Score = 34.3 bits (75), Expect = 0.98
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = -2
Query: 379 KQPNSAIRKCVRVQLIKNGKKVXAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVR 200
K+PNSA+RK +V+L N + A +P +G ++ +E+ VLV G GR V D PG R
Sbjct: 75 KKPNSALRKIAKVRL-SNRHDIFAHIPGEG--HNSQEHSIVLVRG-GR----VKDSPGKR 126
>UniRef50_UPI000049A59F Cluster: ankyrin repeat protein; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: ankyrin repeat
protein - Entamoeba histolytica HM-1:IMSS
Length = 681
Score = 33.9 bits (74), Expect = 1.3
Identities = 22/69 (31%), Positives = 39/69 (56%)
Frame = -2
Query: 334 IKNGKKVXAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALY 155
IK + V F+P + L ++ N+ V V +KG AVG I G R+ + +A +++ L
Sbjct: 544 IKKVRMVSDFMPEEEELLRLKSNEIVEVYWEHKKGWAVGGING-RYGMFPLAKGTIIPLS 602
Query: 154 KEKKERPRS 128
KE++++ S
Sbjct: 603 KEEQDKINS 611
>UniRef50_A4H5P4 Cluster: Putative uncharacterized protein; n=1;
Leishmania braziliensis|Rep: Putative uncharacterized
protein - Leishmania braziliensis
Length = 1248
Score = 31.9 bits (69), Expect = 5.2
Identities = 16/48 (33%), Positives = 23/48 (47%)
Frame = +3
Query: 165 RRDTLATFTTLKRTPGMSPTA*PLRPNPATSTSSFSSMWFRQPSRGTN 308
RR L F +KR+ R N A+ S +S W RQP +G++
Sbjct: 906 RRTVLGRFEAIKRSGSEKSQQHQQRTNSASLRDSLTSTWERQPQQGSS 953
>UniRef50_Q2G7F6 Cluster: Putative uncharacterized protein
precursor; n=2; Proteobacteria|Rep: Putative
uncharacterized protein precursor - Novosphingobium
aromaticivorans (strain DSM 12444)
Length = 339
Score = 31.5 bits (68), Expect = 6.9
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +3
Query: 171 DTLATFTTLKRTPGMSPTA*PLRPNPATSTSSFSSMWFRQPSRGTNAXTF 320
D+ +T TT+ TP +PTA P P P + +++S+ P GT T+
Sbjct: 31 DSSSTATTVTPTPSPTPTATP-TPTPTATGTAYSTASVDCPYSGTYTGTY 79
>UniRef50_Q6VEC9 Cluster: Ribosomal protein S12; n=1; Emiliania
huxleyi|Rep: Ribosomal protein S12 - Emiliania huxleyi
Length = 124
Score = 31.5 bits (68), Expect = 6.9
Identities = 24/84 (28%), Positives = 42/84 (50%)
Frame = -2
Query: 388 VQXKQPNSAIRKCVRVQLIKNGKKVXAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIP 209
+ K+PNSA R+ +V+ +K + +P G ++++++ VL+ G GR D+
Sbjct: 41 ISPKKPNSANRRIAKVKTLKQPTFLTVKIP--GEKHNLQQHSTVLICG-GRS----KDLI 93
Query: 208 GVRFKVVKVANVSLLALYKEKKER 137
GV K V+ LL + K R
Sbjct: 94 GVHLKAVR-GKFDLLGVNGRKSSR 116
>UniRef50_UPI00006A21E9 Cluster: gamma-glutamyltransferase 6
homolog; n=2; Xenopus tropicalis|Rep:
gamma-glutamyltransferase 6 homolog - Xenopus tropicalis
Length = 452
Score = 31.1 bits (67), Expect = 9.1
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +2
Query: 290 TVTGDECGHFLSVLNELYTDAFADGRV 370
TVT G FL L+ LYTD+F GR+
Sbjct: 206 TVTNPPLGAFLEQLSTLYTDSFVTGRL 232
>UniRef50_Q9F3Q3 Cluster: Putative uncharacterized protein SCO7634;
n=1; Streptomyces coelicolor|Rep: Putative
uncharacterized protein SCO7634 - Streptomyces
coelicolor
Length = 633
Score = 31.1 bits (67), Expect = 9.1
Identities = 19/44 (43%), Positives = 22/44 (50%)
Frame = +1
Query: 172 TRWLLLPP*NELRECHRRRDLYDRIPPLVLRRFLRCGLGNRHGG 303
+RWL LPP +E R L R+PP R FL G RH G
Sbjct: 40 SRWLGLPPADEERVAAAEARLGRRLPP-SYREFLMVSDGWRHAG 82
>UniRef50_A7HJP3 Cluster: FeoA family protein; n=1; Fervidobacterium
nodosum Rt17-B1|Rep: FeoA family protein -
Fervidobacterium nodosum Rt17-B1
Length = 158
Score = 31.1 bits (67), Expect = 9.1
Identities = 18/42 (42%), Positives = 23/42 (54%)
Frame = -2
Query: 277 IEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYK 152
I E VL + K AVG +PGVR +V+K A + LYK
Sbjct: 11 IVEVKRVLPSDISPKLRAVGILPGVRIEVIKAAPMGDPRLYK 52
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 360,104,720
Number of Sequences: 1657284
Number of extensions: 6616162
Number of successful extensions: 16397
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 15845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16305
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 18619342852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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